Georgetown University Database of Cancer
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The Georgetown Database of Cancer (GDOC) Subha Madhavan, PhD Director, Clinical Research Informatics Georgetown Lombardi Comprehensive Cancer Center Contact: [email protected]
Transcript of Georgetown University Database of Cancer
The Georgetown Database of Cancer (GDOC)
Subha Madhavan, PhDDirector, Clinical Research InformaticsGeorgetown Lombardi Comprehensive Cancer Center
Contact: [email protected]
The Georgetown Database of Cancer (GDOC)
• An advanced platform for translational research
• Integrates clinical data with diverse “-omics” data
• Helps identify new therapeutic targets, as well as biologically relevant pathways and networks
• Provides opportunities for biomarker and drug discovery
The Georgetown Database of Cancer (GDOC)Study gene expression and biological networks using Cytoscape and Ariadne Pathway Studio
The Georgetown Database of Cancer (GDOC)
Browse for drugs of interest using chemical structure search function
Study molecular interactions for the most relevant cancer drug targets using an interactive 3D viewer
The Georgetown Database of Cancer (GDOC)
JBROWSE viewer provides integrated view of multiple data types, including gene expression, clinical outcome, and CNV
The Georgetown Database of Cancer (GDOC)
GDOC supports detailed clinical criteria browsing for cohort selection and report generation. Data security is a priority.
The Georgetown Database of Cancer (GDOC)GDOC is packed with analytic tools and features, and has a user-friendly interface with a QUICKSTART option
The Georgetown Database of Cancer (GDOC)
QUICKSTART will allow new users to easily tap into the advanced analytic capabilities of GDOC
Useful resources and links
• Lombardi Biomedical Informatics Grouphttps://informatics.lombardi.georgetown.edu/display/public/Overview
• Ariadne Pathway StudioLicenses are FREE and available upon request
https://informatics.lombardi.georgetown.edu/display/public/Ariadne+License+Request
• Biomedical Informatics Consulting ServicesBuilding D, Room 161
By appointment only, Mondays 2:00 – 3:00 PM
Contact: Caroline Wu, [email protected]
Shared Resources are partially supported by the Georgetown Howard University Center for Clinical and Translational Studies (GHUCCTS) 1UL1RR031975-01
In your publications, remember to mention support provided from the GHUCCTS.
