Functional Anatomy of Prokaryotic Cells-SP10

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Fun c tional Anatomy of Prokaryoti c C e ll s Chapt e r 4

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Functional Anatomy of Prokaryotic Cells

Transcript of Functional Anatomy of Prokaryotic Cells-SP10

Page 1: Functional Anatomy of Prokaryotic Cells-SP10

Functional Anatomy of Prokaryotic Cells

Chapter 4

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Prokaryotic and Eukaryotic Cells

Prokaryote comes from the Greek words for prenucleus.Eukaryote comes from the Greek words for true nucleus.

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Prokaryote

One ci rcular chromosome, not in a membraneNo histonesNo organellesPeptidoglycan cell wallsBinary fission

Eukaryote

Paired chromosomes, in nuclear membrane

Histones presentO rganellesPolysaccharide cell wallsMitosis

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Figures 4.1a, 4.2a, 4.2d, 4.4a, 4.4b, 4.4c

Basic Shapes/MorphologyBacillus (rod-shaped)

Coccus (spherical)

SpiralSpirillumVibrioSpirochete

Scientific name: BacillusShape: Bacillus

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Unusual Shapes of Bacteria

Hyphal/F ilamentous bacter ia

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Figures 4.1a, 4.1d, 4.2b, 4.2c

B A C T E RI A L A RR A N G E M E N T

Pairs: Diplococci, diplobacilli

Chains: Streptococci, streptobacilli

C lusters: Staphylococci

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In a chain, unicellular.
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group of bacteria. only cocci.
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Bacter ial A r rangement

Clusters:

Tetrads

Sarcinae

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4 cooci
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Packet, of cocci, 8 cocci
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monomorphic

vs.

pleomorphic

Rhizobium, Corynebacterium

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98% of bacteria keep their shape
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Change their shape, in response to the environment
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Significance of Size

1. Typical size of prokaryote vs. typical eukaryote

1-2 m vs. 10-100 m 1 m = 10-6 m

2.Epulopiscium sp.

3. Observing a bacter ium vs. a colony

4. Advantage of small size

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Largest bacteria know (Remember.
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Figure 4.6

Functional Anatomy of Prokaryotic Cells

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A . G lycocalyx

Outside cell wallUsually stickyCompositionTwo types of G lycocalyx:Capsule vs. Slime layer

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only in some bacteria. Only on the cell outside cell wall.
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Rigid, highly organized.
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Less organized, loosely formed
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Made of polysocrtes, use capsule and slime layer as a source of nutrient, dehydration
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A . G lycocalyx

Functions of G lycocalyx:Slime layer allows cell to attachCapsules prevent phagocytosis

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eating cell
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B . Cell Wall

1. FunctionPrevents osmotic lysis, r igidity, shape

2. Composition and Structure

Peptidoglycan (PG)

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cell wall is in all the bacteria, gives rigidity and give it its shape
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Peptidoglycan (PG)

1. Disaccharide polymer (N A G and N A M)2. Tetrapeptide side chains3. Peptide cross br idges

Polymer of disaccharide:N-acetylglucosamine (NAG) N-acetylmuramic acid (NAM)

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two sugers, multiples rows of it are present
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4 amino acids, connected to only NAM
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made of amino acids that binds two hanging chain to 2 different rows
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use antibiotics to kill peptidoglycan of bacteria which kills it
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penicilin used to kill peptidoglycan in gram positive because of its thick peptidoglycan. it cant kill gram negative tho do the outer membrane which blokes it
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Figure 4.13a

Peptidoglycan

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this is just one layer of peptidoglycan
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Two types of cell walls

Differentiation based on amount of PG and other componentsG ram-positive vs. G ram-negative

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scientist Gam proposed gram staining
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even tho they all have peptidogylcan they are different based on the different amount of it
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1) G ram-positive (Gm+) cell walls

a. Thick layers of PGb. Presence of

teichoic acids (A lcohol/Glycerol plus phosphate)-May regulate movement of cations-Provide antigenic variation

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the black walls, usually give negative charge to the bacteria to attract positive ions
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dont need to know
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they can be different from each other leading to different bacteria
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2) G ram-negative (Gm ) cell walls

a. Thin layer of PG + outer membrane

b. No teichoic acids

c. Outer membrane: made up ofL ipopolysaccharides (LPS)LPS = O polysaccharide + L ipid A

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the membrane is a part of gram negative cell wall
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these are unique lipids called lipid A, only in gram negative and is endotoxin. by it self is not toxic but when it reactes with your body it will be toxic.
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G ram-negative (Gm ) cell walls

L ipid A is an endotoxinO polysaccharide antigen, e.g., E . coli O157:H7

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Thick peptidoglycanTeichoic acids

G ram-positiveCell Wall

Figure 4.13b c

Thin peptidoglycanOuter membrane

G ram-negativeCell Wall

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How penicillin affects bacter ial

E ffect on G ram-positive vs. G ram- negative

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kill gram positve not gram negative
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Atypical Cell Walls

a. Acid Fast cell wallWaxy lipid (Mycolic acid) bound to peptidoglycan in acid-fast cell walls.

MycobacteriumNocardia

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is not gram positive or negative. it has very little peptidogycan but has mycolic acid which are tin rigid peptidglycan
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acid fast are very hard to kill, harder than gram negative.
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Atypical Cell Walls

b. MycoplasmasLack cell wallsSterols in plasma membrane

c. A rchaeaWalls of pseudomurein (lack N A M and D-amino acids)

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is a bacteria that does not have cell wall
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helps protect them, it also helps them to be very flexible, and squeeze through fillers and cause contamination
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Figure 4.14a

C . The Plasma Membrane or Cytoplasmic membrane

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cytoplasmic membrane
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C . The Plasma Membrane

1. Phospholipid bilayer and Proteins

2. F luid Mosaic Model

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C . The Plasma Membrane

3. Functions of plasma membraneSelective permeability allows passage of some moleculesEnzymes for ATP productionPhotosynthetic pigments Damage to the membrane by alcohols, quaternary ammonium (detergents), and polymyxin antibiotics causes leakage of cell contents

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based on the size, shape, and charge
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bacteria makes the most of their ATP in the plasma membrane
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4. Movement Across Plasma Membrane

1. Passive T ransporta. Simple diffusion: C O2, O2b. Facilitated diffusion: G lycerolc. Osmosis: water

2. Active transporta. Active T ransportb. G roup T ranslocation

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always molecules move happens from higher concentration to lower concentration. does not requier energy
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lower to higher concentratoin which requires energy.
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Figure 4.17a

Passive T ransporta. Simple diffusion:

Movement of a solute from an area of high concentration to an area of low concentration

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Figure 4.17b-c

Passive T ransportb. Facilitated diffusion: Solute combines

with a transporter protein in the membrane

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Figure 4.18a

Passive T ransportc. Osmosis:

The movement of water across a selectively permeable membrane from an area of high water to an area of lower water concentration

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only water because it is the part of cytoplasm. j
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water is moving in that direction to dilute that area
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Figure 4.18c e

Osmolarity of the solution outside bacterial cells and its significance

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osmolarity of a bacterial cell is .85%
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.85%
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.85%
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ex of Iso: Saline
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.85%
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Ex of hypo: Water
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9%
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.85%
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.8%
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bactria can be killed just by changing salt concentrations
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Active transport

a. Active T ransportUsing either PM F or A TP

b. G roup T ranslocation

Endocytosis and Exocytosis????

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is a process of active transport but a bit different. the molecule that is being transported during the process of the transfer(a phosphate group is added)
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processes done by eucariotes, bacteria cannot process them
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G roup T ranslocation

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D . F lagella

1. Function

2. Made up of 3 partsa. filament: F lagellinb. A ttached to a

protein hook

c. anchored to the wall and membrane through basal body

Flagella proteins are H antigens (e.g., E . coli O157:H7)

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bacterias flagella is used by our body to be detect
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only few bacteria have flagella
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a. Monotrichous b. amphitr ichousc. Lophotr ichous d. per itr ichous

3. F lagellar ar rangement on a bacter ial cell surface

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flagella present at both end
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flagella at one end
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multiple flagella at one end
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Ikram Khan October 1, 2010 4:05 PM
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4. Run and tumble

5. chemotaxis and phototaxis

6. H elicobacter pylorii

7. other types of bacter ial motility

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the movement of bacteria
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movement in response to chemicals
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move in response to light
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it overcomes all the immum mechanism of the body. due do its strong flagella to overcome being tract by mucus
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1. Who has them?

2. F imbriae

3. Pili -Facilitate transfer of DN A from one cell

to another-G liding motility-Twitching motility

E . F imbriae and Pili

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used to move the bacteria around. not in all bacteria
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gram negative bacteria have fimbriae and pili
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used for attachment
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some pili is used to transfer bacterial DNA
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No Cytoskeleton

No membrane bound organelles

F . Cytoplasm

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1. bacter ial chromosome character isticsNo nuclear membraneNo H istonesCircular DN AHaploid

2. size and packaging: Supercoiling

G . Nucleoid

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one copy of each gene
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twisting their DNA in a circular form
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1. What are they?

2. Advantages to bacter ia

3. Transfer

H . Plasmids

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DNA molecules
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is not a part of that chromosomal DNA, not part of the nucliod DNA
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not all bacteria have plasmids
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Ikram Khan October 1, 2010 4:18 PM
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some plasmids can resist antibiotics
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I . Ribosomes

1. Function2. Composition/structure

3. Antibiotic effect on r ibosomes

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every bacteria have it. they are the location where protein is synthesized
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in humans and bacteria ribosomes are made of proteins and RNA. the proteins differ from human and bacterias
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J. Inclusions/storage granules

1. M etachromatic/volutin/polyphosphate granulesdiagnostic use: Corynebacterium diphtheriae

2. Polysaccharide G ranules

3. L ipid Inclusions PH B:poly- -hydroxy butyric acid

4. Sulfur G ranules

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propose is to store nutrients
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causes diptheriae
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are broken down and used as food and energy at worse conditions
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made of lipid of PHB type. also use as a source of energy. we benifit fro the lipid inclusions in bacteria by making plastics
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only is some bacteria that can use sulfur. they can use it for energy.
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K . Endospores

1. Who produces?

2. N O T reproductive! Resting structures

3. When are they produced?

4. How long can they survive?

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many gram positive uses it, not all.
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bacteria produce it
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when they know their dead is immanent. because of starvation
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any where from weeks to years.
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pores are resting structures and are not reporductive
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not of the methods that we use to kill bacteria does not kill spore. for example chemicals and boiling water, UV radation
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Formation of Endospores by Sporulation

Figure 4.21a

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during the spore production everything is duplicated. ribozomes,
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bacteria gets killed when it releases the spore
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5. Structure of a free endopsore (DPA)

6. G ermination

7. Importance of endospores medically and infood processing

8. Destroying endospores

a. John Tyndall and tyndallizationb. autoclave and pressure cooker

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spores will germinate and give rise to bacterial cell
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need to remove spores and bacteria off medical equipment when used in sergery
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by killing them by a temp and for a period of time
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boiling and then leaving it at room temp. doing this multiple times. but we really don't need to do this for our food because endospores in the soil
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hight temp and pressure