Find Full Text Journal Articles Using Pubmed

Find Full Text Journal Articles Using Pubmed

Nancy B. Clark, M.Ed.Director of Medical Informatics Education

FSU College of Medicine

1All recourses are available online in Medical Informatics site under Topics: Research

Summer 2011

Session Objectives

Attendees will be able to Use Pubmed to search the medical journalsFind full text peer-reviewed journal articles

2Summer 2011

Tutorials Available

Tutorials at Pubmed Searching PubMedUsing Mesh TermsUsing My NCBI

3Summer 2011

Log Into EZProxy

If off campusBefore you start searching

Summer 2012 4

What is MEDLINE?

produced by the National Library of Medicineelectronic version of Index Medicus, International

Nursing Index, International Dental Literature1966 – present4,000+ international biomedical journalsincludes journal articles, reviews, letters, editorials,

comments, some conference proceedings and books

5Summer 2012

MEDLINE Fields

AuthorTitleDateType of publicationJournal, Volume, IssuePage numbersAbstract

InstitutionMeSH HeadingsA lot of cataloging

numbers

6Summer 2012

Where is MEDLINE?

Pubmed (NLM)Google ScholarMDConsultMedscape

Links to Full text journal

articlesBooksEBM databases

7Summer 2012

Getting To PubMed From Library1. Use Search Engines PubMed Box or

2. Use MedResources List or Map

3. Type PubMed into Online Resources searchID is built into links

8Summer 2012

PubMed MEDLINEEntering PubMed

9

Tutorials

Type search terms

Save searches in NCBI

Summer 2012

Why get NCBI Account?

Save searches Save citations in My Bibliography Automatically update and e-mail search results

from your saved searchesFilter search results Highlighting search terms

10Summer 2012

11Summer 2012

PubMed MEDLINEPreliminary Results

12

Large number of hits.

Scroll down to ‘Details’ to show how PubMed translated the search. (You can modify the search by typing in the text box.) Summer 2012

Boolean Operators

ANDORNOTParenthesis*quotes

13

“medication errors” AND “quality improvement” NOT (ambulatory OR “nursing home”)

Summer 2012

PubMed MEDLINELimit Results

14

Click on ‘Limits’Limit by• Pub Date• Subjects• Type journal• Type research• Language• …Warning: Limits all searches until removed

Summer 2012

Types of Articles

EditorialsLettersReview ArticlesMeta-Analysis

Systematic reviews

Clinical Guidelines

Original ResearchCase StudiesCase ControlTime SeriesCross sectionalCohortControl trialsRandomized Control

Trials

15Summer 2012

PubMed MEDLINERefined Results

16

Number of hits is still quite large. (384 from previous 22,441)

Add ‘cancer ethics’ to the search terms.

Summer 2012

PubMed MEDLINE

Multiple Terms:Use Advanced

Search History#2 AND #3Click on number

of hits to see results

17

Combining Searches

Summer 2012

Getting the articles

18

Display Settings:Select ‘Abstract’ view and click on ‘Apply’

Click on FSU icon to link to full text.

Summer 2012

19

Click on Article Title: Abstract View

Related Citations

Link to full text FSU subscriptions

Summer 2012

MeSH Terms

20

Use MeSH terms to find search terms.Summer 2012

21Summer 2012

When there is no FSU Button…When there is no FSU Button…

22Summer 2012

Identify the Full Journal Title

23Summer 2012

Finding Full Text Articles

Pubmed Linked to full text? No…1. Medical E-Journals list from library

webpage? Not listed…2. FSU E-Journals from library webpage.

In electronic format? No...3. Interlibrary loans for titles not owned

by FSU: MedLibrary@med.fsu.edu

24Summer 2012

Medical E-Journals

In electronic less than 12~ years

Each journal different

Digitizing old issues slowly

25Summer 2012

PubMed MEDLINEGetting the articles when there is no FSU icon

If there is no FSU icon, there are other options:

1. Search E-Journal Titles for the journal name

Summer 2012 26

All FSU E-Journals

Under ResourcesExpand E-JournalsClick on

All FSU E-Journals

27Summer 2012

FSU Libraries E-Journals

28Summer 2012

FSU E-Journals

Consultant Pharmacist only up to 2000

29Summer 2012

Interlibrary Loan

30

Interlibrary Loan:1. Sign into EZProxy2. Fill out form3. Copy and Paste info from

PubMed Citation into Section 24. Get PMID #Summer 2012

Finding Journal Articles at FSU

31

JOURNAL ARTICLES

Interlibrary

Loan

DOOR 1Direct Link to

full-textarticle.

DOOR 2Locate thee-journal

with Medical Library E-Journals list.

DOOR 3Locate the e-journal with Serials Solutions

INTER-LIBRARY LOAN

medlibrary@med.fsu.edu

Summer 2012

Interesting New Tool: knalij.com

Use Chrome Browser (FireFox second choice)Open Library site and open PubmedIn another tab, open knalij.comTypes of Searches

Journal Cluster Map (default)Co-author MapImpact of funding Map

Summer 2012 32