Figure S1
description
Transcript of Figure S1
![Page 1: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/1.jpg)
Figure S1
A.
B.
*
**
*
*
* *
**
*
*
**
![Page 2: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/2.jpg)
Figure S2
A.
B.
Fold
Incr
ease
OxPhos Genes
![Page 3: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/3.jpg)
Figure S3
Conc
entr
ation
(mm
ol/L
)
SEL-ResistantSEL-Sensitive
B.
Rela
tive
Luci
fera
se A
ctivi
ty (A
TP)
C.
SEL-ResistantSEL-Sensitive
ECAR
(mpH
/min
) or
OCR
(pm
ol/m
in)
A.
SEL-ResistantSEL-Sensitive
![Page 4: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/4.jpg)
Figure S4
Sensitivity Groups
OC
R (
pmol
es/m
in)
0
50
100
150
200
250
P < 0.0001 CI >1.0
CI <1.0
![Page 5: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/5.jpg)
Figure S5
Dea
d C
ells
(%
)
A. O
CR (p
mol
es/m
in)
B.
PGC1
α [
Trea
tmen
t : M
ock]
C.
![Page 6: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/6.jpg)
Figure S6
D24D24_0.5hD24_3hD24_12hD24_24hD29D29_0.5hD29_3hD29_12hD29_24hWM1799WM1799_0.5hWM1799_3hWM1799_12hWM1799_24hUCSD354LUCSD354L_0.5hUCSD354L_3hUCSD354L_12hUCSD354L_24hSKMEL5SKMEL5_0.5hSKMEL5_3hSKMEL5_12hSKMEL5_24hMEL624MEL624_0.5hMEL624_3hMEL624_12hMEL624_24h
JN
K_
pT
183-T
185
C-R
af_
pS
338
HE
R2
eE
F2
p27_p
T157
c-M
et_
pY
1235
ST
AT
3_p
Y705
Mre
11
Chk2_p
T68
NF-k
B-p
65_p
S536
p70S
6K
HE
R3
eE
F2K
alp
ha-C
ate
nin
beta
-Cate
nin
AC
C1
ST
AT
5-a
lpha
PK
C-a
lpha
p21
N-C
ad
heri
nIR
S1
AM
PK
_alp
ha
Akt_
pT
308
Akt_
pS
473
Sm
ad
3G
SK
3-a
-b_p
S21_S
9G
SK
3_p
S9
C-R
af
Tau
mT
OR
_ p
S2448
VA
SP
Syk
EG
FR
_pY
992
VE
GFR
2N
F2
HE
R2_p
Y1248
Shc_p
Y317
4E
-BP
1_p
S65
ME
K1
eIF
4E
4E
-BP
1P
CN
AC
hk2
PR
AS
40_p
T246
p38_p
T180_Y
182
Colla
gen_V
Im
TO
R53B
P1
Notc
h1
PI3
K-p
110-a
lpha
PD
K1_p
S241
p38_M
AP
KH
ER
3_p
Y1298
Dvl
3P
TE
NN
otc
h3
GS
K3-a
-b4E
BP
1_p
T37-T
46
PI3
K-p
85
GA
B2
p53
ER
-alp
ha
c-K
itS
mac
Bim
p27
PK
C-a
lpha_p
S657
YA
PP
-Cad
heri
nE
GFR
Rab
11
EG
FR
_pY
1068
XR
CC
1FO
XO
3a_p
S318_S
321
Src
_pY
416
YA
P_p
S127
MIG
-6E
RC
C1
Sm
ad
1C
asp
ase
-8R
ad
50
Src
GA
TA
3IN
PP
4B
CD
31
PA
RP
_cle
ave
dP
RM
CL-1
E-C
ad
heri
nT
ub
eri
nc-M
et
Bid
FO
XO
3a
Sm
ad
414-3
-3_e
psi
lon
Annexi
n_I
Casp
ase
-7_c
leave
dD
198
Rab
25
JN
K2
Bcl-X
Bcl-xL
DJ-1
Bax
Casp
ase
-9_c
leave
dD
330
Cla
ud
in-7
Cave
olin
-1S
tath
min
Cyc
lin_D
1C
yclin
_E1
K-R
as
Beclin
YB
-1P
axi
llin
Fib
ronecti
nR
ad
51
EG
FR
_pY
1173
AR
Bcl-2
Bcl-2
ER
-alp
ha_p
S118
Bak
Casp
ase
-3_a
cti
veIG
FB
P2
TA
Z_p
S89
FA
KM
EK
1_p
S217_S
221
Snail
c-J
un_p
S73
AM
PK
_pT
172
AC
C_p
S79
p70S
6K
_pT
389
p90R
SK
_pT
359_S
363
MA
PK
_pT
202_Y
204
p27_p
T198
AIB
1S
6_p
S240_S
244
S6_p
S235_S
236
YB
-1_p
S102
PT
CH
c-M
ycC
hk1_p
S345
Chk1
IGF-1
R-b
eta
Cyc
lin_B
1R
b_p
S807_S
811
MS
H6
CD
K1
Rb
MS
H2
Src
_pY
527
XIA
PcIA
PA
kt
CO
X-2
2
1
A.
mTOR1/2 Activity RTK Activation Tumor Suppression MAPK Activity Proliferation
D24D24_0.5hD24_3hD24_12hD24_24hD29D29_0.5hD29_3hD29_12hD29_24hWM1799WM1799_0.5hWM1799_3hWM1799_12hWM1799_24hUCSD354LUCSD354L_0.5hUCSD354L_3hUCSD354L_12hUCSD354L_24hSKMEL5SKMEL5_0.5hSKMEL5_3hSKMEL5_12hSKMEL5_24hMEL624MEL624_0.5hMEL624_3hMEL624_12hME L624_24h
c-M
et_
pY
1235
c-K
itC
yclin
_D1
Fib
ronect
inS
TA
T5-a
lpha
bet
a-C
ate
nin
NF2
Sm
ac
Dvl
3D
J-1
Bcl-X
Paxi
llin
ER
CC
1H
ER
2B
cl-xL
Bid
Bax
JN
K2
p27
_pT
157
eE
F2K
p70
S6K
AC
C_p
S79
AM
PK
_pT
172
MA
PK
_pT
202_Y
204
ME
K1_p
S21
7_S
221
Shc_p
Y31
7H
ER
2_p
Y12
48
EG
FR
_pY
1068
AM
PK
_alp
ha
Notc
h3
Notc
h1
Snail
YB
-1_p
S102
PR
AS
40_p
T246
Akt_
pS
473
NF-k
B-p
65_p
S536
p27
_pT
198
YA
P_p
S12
7IG
FB
P2
4E
BP
1_p
T37-T
46
4E
-BP
1_p
S65
S6_p
S240
_S24
4S
6_p
S235
_S23
6m
TO
R_
pS
2448
p70
S6K
_pT
389
mT
OR
C-R
af
Rb
Cyc
lin_E
1R
b_p
S80
7_S
811
Chk1_p
S345
Cyc
lin_B
1C
DK
1G
AB
2C
hk1
GS
K3-a
-bP
-Cad
heri
nM
SH
6eE
F2
CO
X-2
YB
-1A
IB1
Tub
eri
nA
CC
1V
EG
FR
2P
I3K
-p85
Akt
4E
-BP
1p
21XIA
Pp
38_p
T180
_Y182
Becl
inFO
XO
3aS
rc_p
Y416
53B
P1
c-M
ycB
imIR
S1
HE
R3_p
Y12
98
N-C
adheri
nS
mad
3IG
F-1
R-b
eta
HE
R3
Akt_
pT
308
GS
K3-a
-b_p
S21_S
9G
SK
3_p
S9
Cave
olin
-1cIA
PA
nnexi
n_I
EG
FR
Cla
ud
in-7
ER
-alp
ha_
pS
118
Bak
EG
FR
_pY
992
Bcl-2
PD
K1_
pS
241
ME
K1
eIF
4EP
CN
Ap
38_M
AP
KFA
KB
cl-2
p27
PT
CH
Chk2
PT
EN
VA
SP
Chk2_p
T68
PI3
K-p
110-
alp
ha
Rab
11
AR
Syk
14-3
-3_e
psi
lon
Sm
ad
4p
53Y
AP
TA
Z_p
S89
c-J
un_p
S73
EG
FR
_pY
1173
Rad
51
XR
CC
1M
re11
Sta
thm
inC
asp
ase
-3_a
cti
vep
90R
SK
_pT
359
_S36
3K
-Ras
MC
L-1
PK
C-a
lpha
Rab
25
PK
C-a
lpha_p
S657
Colla
gen_V
IT
auJN
K_
pT
183-T
185
C-R
af_
pS
338
PR
MS
H2
Casp
ase
-9_c
leav
ed
D330
INP
P4B
ER
-alp
ha
Src
Casp
ase
-7_c
leav
ed
D198
PA
RP
_cle
ave
dFO
XO
3a_p
S318_
S321
GA
TA
3S
mad
1E
-Cad
heri
nR
ad
50
MIG
-6C
asp
ase
-8c-M
et
Src
_pY
527
alp
ha-
Cat
enin
CD
31S
TA
T3_p
Y705
2
1
B.
![Page 7: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/7.jpg)
P-S6 (S235_S236)
Rela
tive
Prot
ein
Leve
ls
D24 D29 WM1799 UCSD354 SKMEL5 MEL624
P-AKT (T308)
Rela
tive
Prot
ein
Leve
ls
D24 D29 WM1799 UCSD354 SKMEL5 MEL624
Cl. Caspase 7
Rela
tive
Prot
ein
Leve
ls
D24 D29 WM1799 UCSD354 SKMEL5 MEL624
Figure S6
P-MAPK (T202_Y204)
Rela
tive
Prot
ein
Leve
ls
D24 D29 WM1799 UCSD354 SKMEL5 MEL624
C.
![Page 8: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/8.jpg)
Figure S6
D.
MAPK & mTOR1/2 Activity Proliferation Apoptosis Tumor Suppression RTK Activation AKT Activity
WM3854_ConWM3854_AZD6244WM3854_AZD8055WM3854_6244+8055WM1361_ConWM1361_AZD6244WM1361_AZD8055WM1361_6244+8055
Snail
C.R
af
JN
K2
Chk1_p
S345
Sm
ad
4C
hk1
p21
YA
P_p
S127
4E
BP
1_p
T37
p70S
6K
_pT
389
S6_p
S240_S
244
S6_p
S235_S
236
Akt_
pS
473
PR
AS
40_p
T246
eE
F2
4E
.BP
1_p
S65
4E
BP
1_p
T70
AC
C1
P.C
ad
heri
nT
ub
erin
Cyc
lin_E
1G
SK
3.a
.bA
kt
Sm
ac
INP
P4B
GA
TA
3c.M
etS
tath
min
Ku80
Beclin
4E
.BP
1R
ad
51
Rb
ER
.alp
ha_p
S118
GS
K3.a
.b._
pS
21_S
9P
DK
1_p
S241
YB
1_p
S102
IGFB
P2
AIB
1C
hk2
AT
M.R
HE
R3
p27_p
T157
14.3
.3.e
psi
lon
p27_p
T198
c.K
itE
RC
C1
PA
RP
_cle
ave
dP
RB
cl.2
GA
B2
ST
AT
5E
.Cad
heri
nP
I3K
.p85
EG
FR
_pY
1068
EG
FR
_pY
1173
NF.k
B.p
65_p
S536
PT
EN
Casp
ase
.9_c
leave
dD
330
Rab
25
Cla
ud
in.
7c.M
et_
pY
1235
Syk
eE
F2K
K.R
as
FA
KM
re11
HE
R3_p
Y1298
CD
31
Casp
ase
.3_a
cti
vep
38_M
AP
KC
asp
ase
.7_c
leave
dD
198
Bim
Bid
PI3
K.p
110.a
lpha
XR
CC
1B
ak
Casp
ase
.8
IGF.1
R.b
eta
cIA
Pc.M
ycS
TA
T3_p
Y705
Cyc
lin_D
1R
b_p
S807_S
811
p90R
SK
_pT
359_S
363
CD
K1
MS
H2
MA
PK
_pT
202
MS
H6
Cyc
lin_B
1P
CN
AeIF
4E
p53
Src
_pY
527
FO
XO
3A
_pS
318_S
321
Bax
C.R
af_
pS
338
B.R
af.
YB
1D
J.1
Colla
gen_V
IM
IG.6
Bcl.X
beta
.Cate
nin
alp
ha.C
ate
ni
np
70S
6K
EG
FR
CD
49
XIA
Pc.J
un_p
S73
Paxi
llin
TA
Z_p
S89
Sm
ad
3N
.Cad
herin
AM
PK
_alp
ha
AR
PK
C.a
lpha_p
S657
VE
GFR
2C
ave
olin
.1
Annexi
n_I
Src
AM
PK
_pT
172
Fib
ronecti
n53B
P1
![Page 9: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/9.jpg)
0 500 1000 1500MITF
0.0
0.5
1.0
1.5
2.0
Combination Index
MutationBRAF
NRAS
WT
R2=0.32p=0.03
0 500 1000 1500MITF
50
100
150
200
OCR
MutationBRAF
NRAS
WT
R2=0.54p=0.002
Figure S7
A. B.
![Page 10: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/10.jpg)
Figure S7
E.
RLU
WM3854
mRN
A [T
reat
men
t : M
ock]
MEL624C.
mRN
A [T
reat
men
t : M
ock]
WM3854D.
![Page 11: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/11.jpg)
Figure S8
DAPI
MITF
Merge
Mock SEL AZD8055 SEL+8055
A.
![Page 12: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/12.jpg)
Figure S8
RLU
MEL624B.
** *
RLU
MEL624C.
* * *
![Page 13: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/13.jpg)
Figure S8
D.
MEL624
Risc
PGC1
a
MIT
F
mTO
R
RAPT
OR
RICT
OR
RAPO
R+RI
CTO
R
PGC1α
MITF
mTOR
P-AKT(S473)
P-4EBP1(S65)
P-S6(S235/236)
Raptor
Rictor
S6
AKT
WM3854Ri
sc
PGC1
a
MIT
F
mTO
R
RAPT
OR
RICT
OR
RAPT
OR+
RICT
OR
PGC1α
MITF
mTOR
P-AKT(S473)
P-4EBP1(S65)
P-S6(S235/236)
Raptor
Rictor
S6
AKT
![Page 14: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/14.jpg)
Rela
tive
Inte
nsity
Figure S9
A.
Mock
B.
2014
8055
Effect of mTORC1/2 Inhibition
C.
Mo
ck
SE
L
AZ
D80
55
SE
L+
AZ
D80
55
PGC1α
MITF
GAPDH
AZ
D20
14
SE
L+
AZ
D20
14
![Page 15: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/15.jpg)
Figure S10
% In
hib
itio
n
SEL (mM)
A.
% In
hib
itio
n
B.
SEL (mM)
OCR
(pm
ol/m
in/2
5,00
0 ce
lls)
Time (min)
O F C.
![Page 16: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/16.jpg)
P-M
APK
D.
Parental Clone R1 Clone R2
E.
P-S6
Parental Clone R1 Clone R2
Figure S10
![Page 17: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/17.jpg)
Figure S11
A375 A375-R1
Inhi
bitio
n (%
)
A375-R2
Concentration (mM) Concentration (mM) Concentration (mM)
A. B. C.
Inhi
bitio
n (%
)
Concentration (mM) Concentration (mM) Concentration (mM)
D. E. F.WM35 WM35-R1 WM35-R2
![Page 18: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/18.jpg)
Figure S11
G.
A375
A375-R1
Mock Sel AZD8055 Sel+8055
![Page 19: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/19.jpg)
Figure S12
Patient samples
mR
NA
[P
rog
: P
re]
A.
![Page 20: Figure S1](https://reader036.fdocuments.in/reader036/viewer/2022070404/56813a5b550346895da2523c/html5/thumbnails/20.jpg)
Figure S12
59 Melanomas
166 Lung Cancers
172 Hematopoietic & Lymphoid Cancers
Rela
tive
PGC1
a E
xpre
ssio
n
Cancers by Tissue Type
59 Melanomas
B.