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COCKBURN SOUND MANAGEMENT COUNCIL E n v i r o n m e n t a l Q u a l i t y M o n i t o r i n g P r o g r a m 2 0 0 6 / 2 0 0 7 Prepared by: C OCKBURN S OUND M ANAGEMENT C OUNCIL

Transcript of EEEEnnnnvvviiiirrrroooonnnmmmmeeeennnnttttaaaallll...

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Prepared by:

COCKBURN SOUND

MANAGEMENT COUNCIL

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Acknowledgments This report was updated by Jessica Davis for the Cockburn Sound Management Council (CSMC). Special thanks to all stakeholders involved for their valuable contribution to the accuracy of this document. The preparation of this report was funded by the Cockburn Sound Management Council. For further information contact: Cockburn Sound Management Council Shop 1/15 Railway Terrace, Rockingham Beach WA 6168 PO Box 5161, Rockingham Beach WA 6969 Telephone: (08) 9591 3837 Facsimile: (08) 9582 5387 E-mail: [email protected] Recommended reference The recommended reference for this publication is:

Cockburn Sound Management Council (2007), Cockburn Sound Environmental Quality Monitoring Program 2006/2007, Perth, Western Australia.

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Geographical References

The maps included in this report are products of the Department of Environment and Conservation, GIS Application Branch and were produced in July 2007. These maps were produced with the intent that they be used for the Cockburn Sound Management Council. The Department of Environment and Conservation (DEC) does not guarantee that these maps are without flaw of any kind and disclaims all liability for any errors, loss or other consequence which may arise from relying on any information depicted. DEC acknowledges the following datasets and their custodians in the production of this map:

Dataset name Custodian acronym Metadata date WA Coastline, WRC WRC 13/10/2000 Cockburn Sound Management Council Boundary

DoE 16/11/2005

Cockburn Sound Management Council Protection Areas

DoE 08/06/2006

Monitoring Sites, update DoE 28/07/2007 Project Information Requested by: CSMC, Jessica Davis Produced by: GIS Section, Milan Vicentic PMS number: 08074J02 Project file path: C:\PROJECTS\CockburnSoundManagementCouncil\08074J02 Date: 12/09/2007 Datum and Projection Information Vertical Datum: AHD Horizontal Datum: GDA 94 Projection: MGA 94, Zone 50

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CONTENTS

CONTENTS .................................................................................................................... 4

SUMMARY ..................................................................................................................... 6

BACKGROUND .............................................................................................................. 7

OBJECTIVE .................................................................................................................... 7

CONTRIBUTING PARTIES .......................................................................................... 7

ANNUAL MONITORING PROGRAMS 2006/2007.................................................. 10

Cockburn and Warnbro Sounds Water Quality Monitoring Program.....................................10

Jervoise Bay Northern and Southern Harbour Water and Sediment Quality Monitoring

Programs .....................................................................................................................14

Fremantle Ports Marine Quality Monitoring Program..........................................................20

Annual Survey of selected Seagrass Meadows in the Fremantle – Warnbro Sound Region ....25

Environmental Waters Microbiological Monitoring Program ................................................31

City of Cockburn Microbiological Monitoring Program ........................................................34

City of Rockingham Microbiological Monitoring Program ....................................................37

Defence Microbiological Monitoring Program ....................................................................40

Defence TBT and Heavy Metals Monitoring Program .........................................................43

Western Australian Shellfish Quality Assurance Program (WASQAP) ...................................46

Perth Seawater Desalinisation Plant Water Quality Monitoring Program ..............................53

Owen Anchorage Water Quality Monitoring Program.........................................................62

Alcoa Nearshore Marine Survey.......................................................................................65

OTHER MONITORING PROGRAMS – Data collected pre 2006-2007................ 69

Toxicants in Sediments Survey Monitoring Program ..........................................................69

Background Water Quality Monitoring Program for Perth Metropolitan Waters.....................74

Characteristics of Sediment in Perth’s Nearshore Coastal Waters........................................78

Seagrass Mapping and Distribution in Cockburn Sound......................................................82

Survey of Metal Body Burden in Edible Fish Species in Perth’s Coastal Waters .....................86

DATA MANAGEMENT ................................................................................................. 89

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REPORTING ................................................................................................................ 90

Report Cards .................................................................................................................90

Web Reporting System...................................................................................................90

Appendix 1: Contact Details .................................................................................... 91

Appendix 2: Acronyms.............................................................................................. 95

REFERENCES .............................................................................................................. 96

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SUMMARY The Environmental Quality Monitoring Program (EQMP) is an important tool for managing the marine environment of Cockburn Sound. The EQMP has been developed in partnership with stakeholders to provide information on the effectiveness of management recommendations and actions promoted in the Environmental Management Plan for Cockburn Sound and its Catchment 2005 (EMP). Data collected from the EMP is used by the CSMC to produce annual Report Cards on the health of Cockburn Sound. The EQMP for Cockburn Sound comprises monitoring conducted by industry groups, local, state and federal government. As such, a key step in the development of this program is the compilation of information on current monitoring activities occurring in Cockburn Sound. It is intended that the EQMP will be an evolving document which is periodically updated to reflect on-going amendments to the various monitoring programs undertaken by a range of stakeholders in Cockburn Sound. The objective of this document is to provide a summary of on-going monitoring programs which contribute regular data to the EQMP for Cockburn Sound. This document also contains information on the current status of data management, including access to data. The Cockburn Sound Management Council aims to consolidate data collected as part of the program into a single, publicly accessible database. An outline of the current mechanisms used by the Cockburn Sound Management Council to report on data collected as part of this program is also included.

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BACKGROUND The Cockburn Sound Management Council (CSMC) is responsible for coordinating an Environmental Quality Monitoring Program (EQMP) in Cockburn Sound. The EQMP is an important tool for managing the marine environment of Cockburn Sound. It has been developed in partnership with stakeholders to enable the CSMC to produce Report Cards on the health of Cockburn Sound and to provide information on the effectiveness of management recommendations and actions in the Environmental Management Plan for Cockburn Sound and its Catchment 2005 (EMP). The EQMP for Cockburn Sound comprises monitoring conducted by industry groups, local, state and federal government. As such, a key step in the development of this program is the compilation of information on current monitoring activities in Cockburn Sound. In total there are twelve annual monitoring programs and more than four other regular programs undertaken in Cockburn Sound. These programs are undertaken by various stakeholders with individual objectives. Results of most monitoring programs contribute to the production of the annual Report Cards for Cockburn Sound. A map outlining the programs and associated sites that form the EQMP is provided below (see Map 1- Environmental Quality Monitoring Sites).

OBJECTIVE The objective of this document is to provide a summary of on-going monitoring programs which contribute regular data to the EQMP for Cockburn Sound. The EQMP comprises data and information for a range of physical, chemical and biological indicators collected over a number of spatial and temporal scales. This data forms the basis for the development of Report Cards for Cockburn Sound.

CONTRIBUTING PARTIES Industry groups and government agencies that have conducted monitoring or provided funding for monitoring in Cockburn Sound are listed below.

WA Department of Health

WA Mussel Producer Association

WA Department of Fisheries

Alcoa of Australia Ltd City of Rockingham

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ENVIRONMENTAL QUALITY MONITORING SITES

The following map shows monitoring programs that have sampling sites within Cockburn Sound and the nearby area.

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Map 1: Summary of all monitoring programs and monitoring sites in Cockburn Sound.

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ANNUAL MONITORING PROGRAMS 2006/2007

Cockburn and Warnbro Sounds Water Quality Monitoring Program

Custodian Cockburn Sound Management Council together with assistance from Kwinana

Industries Council and Department of Defence. Objective To coordinate monitoring under the State Environmental (Cockburn Sound)

Policy 2005 and implement the Environmental Management Plan for Cockburn Sound and its Catchment 2005 (EMP).

Sampling Fieldwork: Marine and Freshwater Research Laboratory (MAFRL) Site locations (Datum WGS84 (GDA 94)): Site number Site name Area Zone Easting Northing Commenced

CS4 Cockburn Sound North High Protection 50H 376829 6441686 01/01/1983

CS5 Cockburn Sound North High Protection 50H 379308 6441958 01/01/1983

CS6A Jervoise Bay North Moderate Protection 50H 382749 6442651 01/01/1983

CS7 Jervoise Bay South Moderate Protection 50H 383323 6439972 01/01/1983

CS8 Cockburn Sound Central

High Protection 50H 379337 6436947 01/01/1983

CS9 Cockburn Sound East Moderate Protection 50H 383098 6435629 01/01/1983

CS9A Cockburn Sound East Moderate Protection 50H 382367 6432396 01/01/2001

CS10N Rockingham Beach High Protection

Moderate Protection

50H

50H

381396

0381593

6430437

6430569

01/12/2002 – 31/3/2004

01/12/2004

CS11 Mangles Bay High Protection 50H 378890 6429753 01/01/1983

CS12 Desalination Plant Moderate Protection 50H 383577 6436972 04/12/2006

CSSC South Control High Protection 50H 376063 6430632 01/01/1998

CSG1 Garden Island HMAS Stirling South

High Protection

Moderate Protection

50H

50H

377319

377120

6433380

6433158

01/01/2001 – 31/03/04

01/12/2004

CSG2N Garden Island HMAS Stirling Central

High Protection 50H 376039 6436793 01/12/2002

CSG3N Garden Island HMAS Stirling North

High Protection 50H 375728 6441317 01/12/2002

NH3 Jervoise Bay northern harbour inside north

Moderate Protection 50H 383291 6443373 01/01/1997

CSSF Southern Flats High Protection 50H 378716 6431322 01/01/2001

CSCB Challenger Beach High Protection 50H 381133 6438605 01/12/2002

WSSB Warnbro Sound Safety Bay

Warnbro Sound 50H 378444 6424599 01/01/2001

WS4 Warnbro Sound Warnbro Sound 50H 379741 6421498 01/01/2001

Site Location Map (see over):

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Map 2: Sample sites of the Cockburn and Warnbro Sounds Water Quality Monitoring Program.

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Frequency

Program Survey dates

Water Quality Weekly from 4th December 2006 to 26th March 2007 (no sample was taken 25th Dec 06, Christmas Day or the 1st of Jan 07, New Years Day)

Phytoplankton Species Collected at sites CS5, CS8, CS9, CS10N, CS11, CS12, CSG1 and CSG3.

Sites were sampled fortnightly from 4th December 2006 to 26th March 2007 (no sample was taken 25th Dec 06, Christmas Day or 1st of Jan 07, New Years Day). Phytoplankton analysis was undertaken monthly to assist with the interpretation of Chl ‘a’ levels particularly when Chl ‘a’ levels may be of concern.

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Temperature oC in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.15 oC -

Salinity psu in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.1psu -

DO mg/L in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.2mg/L -

Light attenuation

/m in situ – LI1400, irradiance measured at 1m and 7m below surface

Calculated from the logarithim10 of the irradiance values at both depths

-

Secchi m in situ – Secchi disk, 20cm diameter - 0.1m -

pH units in situ – YSI multi-parameter sonde, surface and bottom.

- ± 0.2units 0units

Samples for laboratory analysis: Marine and Freshwater Research Laboratory (MAFRL)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Total nitrogen µgN/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample

Method code - 2700 - 50µgN/L

Total phosphorus

µgP/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample

Method code - 4700 - 5µgP/L

Ammonia µgN/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample – filtered through 0.45µm cellulose nitrate membrane filter

Method code - 2000 - 3µgN/L

Nitrate-nitrite µgN/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample – filtered through 0.45µm cellulose nitrate membrane filter

Method code - 2100 - 2µgN/L

Phosphate (FRP)

µgP/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample – filtered through 0.45µm cellulose nitrate membrane filter

Method code - 4100 - 2µgP/L

Chlorophyll a µg/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample – 1.2µm GF/C filters

Method code - 3020 - 0.1µg/L

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Samples for laboratory analysis: Department of Water, Phytoplankton Ecology Unit (PEU)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Phytoplankton Species

cells/L Depth-integrated water samples collected.

Integrated water samples are well mixed and a 125ml subsample is collected and preserved with the addition of Lugol’s Iodine Solution.

Phytoplankton analysis assists with the interpretation of Chl a levels when Chl a levels may be of concern.

125ml is concentrated down.

Samples are analysed using an inverted light microscope at a magnification of 400x. Four transects across the diameter of the settling chamber are scanned and all species are recorded along with their density (cells/L) and relative density (%).

Accuracy (uncertainty) for either individual species or the total cell count is determined according to the number of cells counted according to the following formula:

Uncertainty = 2/√n

where n = the number of cells counted (not the cell density)

222 cells/L

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Jervoise Bay Northern and Southern Harbour Water and Sediment Quality Monitoring Programs

Custodian LandCorp – Australian Marine Complex Objective This monitoring program is part of commitments under the Jervoise Bay

developments: EPA (1996) Breakwater Extension, Northern Harbour Precinct, Jervoise Bay EPA Bulletin 836; and EPA (1998) Industrial Infrastructure and Harbour Development, Jervoise Bay, EPA Bulletin 908 EPA Ministerial Conditions Statement 490.

Ministerial Conditions specified a five-year monitoring program to be developed as part of the EMP for the Northern Harbour. This five-year period expired at the end of 2002. A change in proponent from Department of Industries and Resources now sees the Northern Harbour managed by LandCorp. Post-construction Northern Harbour water quality monitoring showed that groundwater nitrogen inputs to the harbour were a significant driver of poor water quality within the harbour. The Jervoise Bay Groundwater Recovery Scheme (GRS) was subsequently implemented as a condition of approval for the Jervoise Bay Southern Harbour development (EPA Audit Table items 490:P24.1 and 490:P24.2; EPA 1998) to extract groundwater which was high in dissolved inorganic nitrogen. As part of this scheme, it was decided that although the period of monitoring required for the conditions of approval had lapsed, water quality monitoring should continue in order to measure the effects of groundwater nitrogen removal on water quality in the Northern Harbour. The Construction and Operations EMPs developed for the Southern Harbour project, specified under Ministerial Conditions and Proponent Commitments for Statement 490, requires annual water and sediment quality monitoring to occur for five years post construction. This monitoring program addresses the water quality requirements of audit table items M5.1:1, M5.1:2, M5.2, M5.3:1, P6.1, P6.2, P6.3:1 and the sediment quality requirements of P7.1 and P7.2.

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Sampling Fieldwork: Marine and Freshwater Research Laboratory (MAFRL) Site locations (Datum: UTM 50, GDA94): Site number Site name Area Zone Easting Northing Commenced

NH1 Northern Harbour— Inside South

Moderate Protection 50H 383427 6442122 17/12/1997

NH2 Northern Harbour—Inside Central

Moderate Protection 50H 383160 6442897 17/12/1997

NH3 Northern Harbour—Inside North

Moderate Protection 50H 383291 6443373 17/12/1997

NH4 Northern Harbour—Entrance Moderate Protection 50H 382640 6442799 17/12/1997

NH5 Northern Harbour— Jervoise Bay Central

High Protection 50H 382140 6442800 17/12/1997

NH6 Northern Harbour—Jervoise Bay West

High Protection 50H 381140 6442798 17/12/1997

SHI1 (ITMC Site NW)

Southern Harbour—Northern Entrance

Moderate Protection 50H 382878 6442206 14/12/2000

SHI2 Southern Harbour—Inside North

Moderate Protection 50H 383442 6441663 18/12/2001

SHI3 Southern Harbour—Inside South

Moderate Protection 50H 383367 6441231 18/12/2001

SHI4 Southern Harbour—Southern Entrance

Moderate Protection 50H 383270 6440726 18/12/2001

SHB1 Southern Harbour— Boundary North

High Protection 50H 382616 6441882 03/01/2003

SHB2 Southern Harbour—Boundary Central

High Protection 50H 382379 6441613 03/01/2003

SHC2 (KIC7)

Cockburn Sound—Reference High Protection 50H 382761 6439725 14/12/2000

Old sites, no longer used:

SHC1 (ITMC Site 15)

Southern Harbour Cockburn Sound

High Protection 50H 381485 6438911 14/12/2000 – 28/11/2002

SHC3 (ITMC Site 16)

Southern Harbour Cockburn Sound

Moderate Protection 50H 383804 6439760 14/12/2000 – 28/11/2002

SHC4 (ITMC Site 17)

Southern Harbour Cockburn Sound

High Protection 50H 381854 6440790 14/12/2000 – 28/11/2002

*Sites SHC1, SHC3 and SHC4 were established as turbidity/chlorophyll monitoring sites during the construction of the Southern Harbour. During the summer 2002/2003 monthly monitoring (ongoing operational monitoring rather than construction impact monitoring), these sites were dropped and monitoring at sites SHB1 and SHB2 began. *Site names in brackets are previously or alternate names for the same location.

Site location map (see over):

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Map 3: Sample sites of the Jervoise Bay Northern and Southern Harbour Monitoring Program.

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Frequency

Program Survey dates

Northern Harbour water quality survey

Weekly from beginning of December to end of March. Sites NH1-NH6 (Phytoplankton samples taken at site NH2 only).

Northern Harbour water nutrient survey

Monthly during Summer (December, January, February and March). Sites NH1-NH6, and reference site SHC2.

Northern Harbour sediment quality survey

Every three years during Summer (March). Sites NH1-NH6. The most recent full suite of monitoring was completed in March 2006.

Note: TBT monitoring of sediments at sites NH1-NH4 will be analysed annually while the EQG is exceeded.

Southern Harbour water quality survey

Weekly from beginning of December to end of March. Sites SHI1-SHI4, SHB1-SHB2 (Phytoplankton samples taken at site SHI2 only).

Southern Harbour sediment quality survey

Every three years during Summer (March). Sites SHI1-SHI4. The most recent full suite of monitoring was completed in March 2006.

Note: TBT monitoring of sediments at above sites will be analysed annually while the EQG is exceeded.

Jervoise Bay sentinel mussel survey

Annually during Summer (March). Sites NH3, SHI2 and SHB2.

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Temperature oC in situ – YSI 6600 multi-parameter sonde, temperature-depth profile

- ± 0.15 oC -

Salinity psu in situ – YSI 6600 multi-parameter sonde, salinity-depth profile

- ± 0.1psu -

DO mg/L in situ – YSI 6600 multi-parameter sonde, DO-depth profile

- ± 0.2mg/L -

Secchi m in situ – Secchi disk, 20 cm diameter - 0.1m -

Light Attenuation Coefficient

m-1 In situ – Irradiance measured using a LiCor Model LI-1000 probe with two sensors at 1m and 7m depth

LAC calculated from difference between the logarithm of the irradiance values at each depth

Dependant on wind and wave conditions

-

Water and sediment samples for laboratory analysis: Marine and Freshwater Research Laboratory (MAFRL)

Parameter Units

Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Total nitrogen

(Water) µgN/L

Depth-integrated water sample (using bilge pump)

Method code – 2700

- 50µgN/L

Ammonium

(Water) µgN/L

Depth-integrated water sample (using bilge pump) – filtered through 0.45µm cellulose membrane filter

Method code – 2000

- 3µgN/L

Nitrate-nitrite

(Water) µgN/L

Depth-integrated water sample (using bilge pump) – filtered through 0.45µm cellulose membrane filter

Method code – 2100

- 2µgN/L

Total Phosphorus (Water)

**Not a licence condition

µgP/L

Depth-integrated water sample (using bilge pump)

Method code - 4700

5µgP/L

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Ortho-Phosphate (Water)

**Not a licence condition

µgP/L

Depth-integrated water sample (using bilge pump) – filtered through 0.45mm cellulose membrane filter

Method code - 4100

2µgP/L

Chlorophyll a, b and c

(Water)

µg/L

Depth-integrated water sample (using bilge pump) – filtered through 1.2µm GF/C filters

Method code – 3020

- 0.1µg/L

Sediment heavy metals (As, Cd, Co, Cr, Cu, Pb, Hg, Ni, Sn and Zn)

mg/kg

At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container and homogenised, for subsequent analysis.

Method code – ICP002 (As, Cd, Co, Cr, Cu, Pb, Hg, Ni and Sn)

Method code – ICP007 (Zn)

Sn: 2 mg/kg;

As: Pb—1 mg/kg;

Zn: 0.5 mg/kg;

Ni: 0.4 mg/kg;

Co: 0.2 mg/kg;

Cr, Cu: 0.2 mg/kg;

Cd: 0.06 mg/kg;

Hg: 0.01 mg/kg.

Sediment Total Kjeldahl Nitrogen (TKN)

mgN/g

At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container and homogenised, for subsequent analysis.

Method code – 2600

0.1mgN/g

Sediment Total Phosphorus (TP)

mgP/g

At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container and homogenised, for subsequent analysis.

Method – 4500 0.05mgP/g

Sediment and biota samples for laboratory analysis: National Measurement Institute (Sydney)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Sediment Total Organic Carbon

%C At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container and homogenised, for subsequent analysis.

Method NW_S15 100-200mg/kg

Sediment – Butyltin compounds (Mono-MBT, Di-DBT and Tri-TBT)

ng/g At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container, homogenised, and stored on ice for subsequent analysis.

Method NR_35 - 0.5ug/kg

Sediment – Polycyclic aromatic hydrocarbons (PAH)

- At each site, five sediment cores are taken within a 1 m x 1 m quadrat—one from inside each corner, and one in the centre. The top 2 cm of each core are scraped into a single container and homogenised, for subsequent analysis.

Determine the 16 priority USEPA PAHs.

Method NGCMS_1111

- 1-2mg/kg

Sentinel Mussels (Ag, As, Cd, Cr, Cu, Pb, Hg, Ni, and Zn)

mg/kg Live mussels of uniform size (approximately 160 mussels, 60-70 mm long) will be obtained from commercial mussel growers operating from Cockburn Sound. Two samples of 30 mussels will be frozen immediately on receipt for subsequent analysis for any pre-deployment contamination. The remaining mussels will deployed at 4 m depth in nylon cages for six weeks (50 mussels per site). The mussels will be cleaned after three weeks. After six weeks, the mussels will be retrieved and the flesh of the two control samples and three deployed samples analysed for heavy metals (As, Ag, Cd, Cu, Cr, Hg, Ni, Pb, Zn).

Method Code ICP003 (Ag, As, Cd, Cr, Cu, Pb, Hg, and Al)

Method code ICP008 (Zn)

As: 0.04mg/kg; Ag: 0.02mg/kg; Cr: 0.05mg/kg; Cd, Cu, Ni, Pb, Zn, Hg: 0.01mg/kg

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COCKBURN SOUND MANAGEMENT COUNCIL

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Phytoplankton samples for laboratory analysis: Dalcon Environmental

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Phytoplankton species

cells/L Depth-integrated water samples collected.

Integrated water samples are well mixed and a 125ml subsample is collected and preserved with the addition of Lugol’s Iodine Solution.

50ml of the preserved 125ml is poured into a Utermohl-style settling tube and allowed to settle for a minimum of 24 hours.

Settled samples are analysed using an inverted light microscope at a magnification of 400x. Four transects across the diameter of the settling chamber are scanned and all species are recorded along with their density (cells/L) and relative density (%)

Accuracy (uncertainty) for either individual species or the total cell count is determined according to the number of cells counted according to the following formula:

Uncertainty = 2/√n

where n = the number of cells counted (not the cell density)

222 cells/L

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COCKBURN SOUND MANAGEMENT COUNCIL

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Fremantle Ports Marine Quality Monitoring Program

Custodian Fremantle Ports

Objective 1. Monitor the overall health of those areas of the port that are at risk of being adversely affected by port related activities. 2. Also to monitor specific areas of environmental concern associated with historical activities, in order to identify possible requirements for management response. 3. Overall to test whether water quality monitoring meets the Environmental Quality Criteria set out in the State Environmental (Cockburn Sound) Policy 2005.

Sampling Fieldwork: Department of Water – Aquatic Sciences Branch Site locations: (Datum: GDA 94) Site number Site name Area Zone Easting Northing Commenced

BC11 Kwinana Bulk Jetty north Moderate Protection 50H 382644 6432237 19/09/2001

BC12 Kwinana Bulk Jetty south Moderate Protection 50H 382521 6431751 19/09/2001

KBT14 Kwinana Bulk Terminal north

Moderate Protection 50H 383575 6435777 27/09/2002

KBT15 Kwinana Bulk Terminal south

Moderate Protection 50H 383178 6435540 27/09/2002

SB9* Channel Marker (Beacon D) – Across from Success Bank

Owen Anchorage 50H 376647 6449619 19/09/2001

PB10* Channel Marker (Beacon K) – Across from Parmelia Bank

Owen Anchorage 50H 377571 6445122 19/09/2001

* Data collected from these sites have not been incorporated into the Cockburn Sound Report Cards for 2006/2007 as these sites occur in Owen Anchorage.

Site Location map: see over

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COCKBURN SOUND MANAGEMENT COUNCIL

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Map 4: Sample sites for the Fremantle Ports Marine Water Quality Monitoring Program.

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COCKBURN SOUND MANAGEMENT COUNCIL

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Frequency

Program Survey dates

Water quality and biota Bi-annual monitoring

Once in March and once in October at all four sites.

Sediment Annual monitoring

Once in March at all four sites.

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Temperature oC in situ – Hydrolab multiprobe logger, 0.2m, 0.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- ± 0.10 oC -5 oC

Salinity ppt in situ – Hydrolab multiprobe logger, o.2m, o.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- ± 0.2ppt 0ppt

Conductivity mS/cm

in situ – Hydrolab multiprobe logger, o.2m, o.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- ± 0.001mS/cm 0mS/cm

DO mg/L in situ – Hydrolab multiprobe logger, o.2m, o.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- ± 0.2mg/L 0mg/L

DO % saturation

in situ – Hydrolab multiprobe logger, o.2m, o.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- - -

pH units in situ – Hydrolab multiprobe logger, o.2m, o.5m then intervals of 0.5m to depth of 5m then 1m intervals until bottom

- ± 0.2units 0units

Secchi m in situ – Secchi disk - 0.1m -

Samples for laboratory analysis: National Measurement Institute (NMI)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Total suspended solids (TSS)

mg/L Water pump – surface water sample (0.0-0.5m) – stored on ice until analysis

Method code –

WL126

- 1mg/L

Total nitrogen mgN/L

Water pump – surface water sample (0.0-0.5m) and bottom water (~0.5m above sediment) – stored on ice until analysis

Method code – WL239 - 0.025mg/L

Total phosphorus

mgP/L Water pump – surface water sample (0.0-0.5m) and bottom water (~0.5m above sediment) – stored on ice until analysis

Method code – WL239 - 0.005 mg/L

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COCKBURN SOUND MANAGEMENT COUNCIL

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Ammonium mgN/L

Water pump – surface water sample (0.0-0.5m) and bottom water (~0.5m above sediment) – filtered through 0.45µm cellulose-nitrate membrane – stored on ice until analysis

Method code – WL239 - 0.005mg/L

Nitrate mgN/L

Water pump – surface water sample (0.0-0.5m) and bottom water (~0.5m above sediment) – filtered through 0.45µm cellulose-nitrate membrane – stored on ice until analysis

Method code – WL239 - 0.01 mg/L

Free reactive phosphorus (FRP)

mgP/L Water pump – surface water sample (0.0-0.5m) and bottom water (~0.5m above sediment) – filtered through 0.45µm cellulose-nitrate membrane – stored on ice until analysis

Method code – WL239 - 0.005 mg/L

Dissolved organic carbon (DOC)

mg/L Water pump – surface water sample (0.0-0.5m) – filtered through 0.45µm cellulose-nitrate membrane – stored on ice and away from light until analysis

Method code – WL240 - 1mg/L

Alkalinity mg CaCO3

/L

Water pump – surface water sample (0.0-0.5m) – stored on ice until analysis

Method code – WL122 - 1mg/L

Chlorophyll a, b, c and phaeophytin

mg/L Water pump – surface water sample (0.0-0.5m) – filtered through 1.2µm glass microfibre filter paper – stored on ice and away from light until analysis

Method code – WL177 - 0.0005mg/L

Samples for laboratory analysis: National Measurement Institute (NMI)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Dissolved copper

µg/L Water pump – surface water sample (0.0-0.5m) – filtered through 0.45µm cellulose-nitrate membrane – stored on ice until analysis

Method code – NT2_47 - 2µg/L

Sediment - total nitrogen (TN)

mg/kg Polycarbonate corers (45mm diameter) – composite sample of three sediment cores, top 3-5cm of each core transferred to glass sample jar – stored on ice until analysis

Method code – L132WL119 - 50mg/kg

Sediment – nitrate (NO3), nitrite (NO2)

mg/kg As above. Method code –WL119WL239 - 5mg/kg

Sediment – total phosphorus (TP)

mg/kg As above. Method code – WL195 - 0.1mg/kg

Sediment – total organic carbon (TOC)

mg/kg As above. Method code – NW_S15 - 100mg/kg

Sediment – heavy metals (As, Cd, Cr, Cu, Pb, Hg and Zn)

mg/kg As above. Method code – NT2_49 - As, Cd, Cr, Cu, Pb, Zn: 0.5mg/kg. Hg: 0.2mg/kg

Sediment – organotins (TBT, DBT and MBT)

ng/g As above. Method code – NR_35 - 2ng/g

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COCKBURN SOUND MANAGEMENT COUNCIL

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Sediment – polycyclic aromatic hydrocarbons (PAH)

mg/kg As above. Method code – NGCMS 1111 - 0.2 mg/kg

Mussel – metals (As, Cd, Cr, Cu, Pb, Hg and Zn)

mg/kg Scraped from within 1m of surface from nearest pylon by divers or using metal rake with net – animal sized 30-90mm in length – stored on ice until analysis

Method code – NT2_46 - 0.01mg/kg

(As 0.05mg/kg)

Mussel – organotins (TBT, DBT and MBT)

ng/g Scraped from within 1m of surface from nearest pylon by divers or using metal rake with net – animal sized 30-90mm in length – stored on ice until analysis

Method code – NR_35 - 5ng/g

Mussel – Polycyclic aromatic hydrocarbons (PAH)

mg/kg Scraped from within 1m of surface from nearest pylon by divers or using metal rake with net – animal sized 30-90mm in length – stored on ice until analysis

Method code – NGCMS 1111 - 0.5 mg/kg

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COCKBURN SOUND MANAGEMENT COUNCIL

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Annual Survey of selected Seagrass Meadows in the Fremantle – Warnbro Sound Region

Custodian Cockburn Sound Management Council, Department of Environment and

Conservation – Marine Ecosystems Branch and Edith Cowan University

Objective Monitoring of Seagrass Health under the State Environmental (Cockburn Sound) Policy 2005

Sampling Fieldwork: Edith Cowan University – Centre for Ecosystem Management Sample site locations (Datum WGS84):

Site number

Site name Area Zone Easting Northing Commenced

1* Fish Rocks Owen Anchorage 50H 380212 6449287 1998

2* Stragglers Rocks Owen Anchorage 50H 373107 6451181 1998

3* Woodman Point Owen Anchorage 50H 380926 6444617 1998

4* Carnac Island Owen Anchorage 50H 375369

375242

6445354

6445412

1998-04^

Jan 2005

5 Garden Island High Protection 50H 375588 6441169 1998

6 Luscombe Bay High Protection 50H 375089 6440316 14/01/2002

7 Garden Island Settlement High Protection 50H 376425 6435186 14/01/2002

8 Jervoise Bay E3 Moderate Protection 50H 384072 6439804 14/01/2002

9 Kwinana High Protection 50H 381565 6437611 -

10 Southern Flats High Protection 50H 378159 6432070 1998

11 Mangles Bay High Protection 50H 378846 6428639 -

12 Bird Island N/A 50H 377076 6428076 -

13 Mersey Point N/A 50H 377832 6424419 1998

14 Coogee Beach High Protection 50H 383131 6446522 Jan 2007

^The Carnac Island site was changed in 2005 due to encroachment of a large sand sheet across the site. This was causing a loss of Posidonia and an increase in Amphibolis cover which made interpretation of the data difficult. * Data collected from these sites have not been incorporated into the Cockburn Sound Report Cards for 2006-2007 as these sites occur in Owen Anchorage.

Reference Sites:

Site number

Site name Area Zone Easting Northing Commenced

WS Ref 1 Warnbro Sound 2.0 m N/A 50H 378951 6423988 2003

WS Ref 2 Warnbro Sound 2.5 m N/A 50H 378957 6423948 2003

WS Ref 3 Warnbro Sound 3.2 m N/A 50H 378967 6423933 2003

WS Ref 4 Warnbro Sound 5.5 m N/A 50H 378938 6423789 2003

WS Ref 5 Warnbro Sound 7.0 m N/A 50H 378971 6423768 2003

These are the reference sites against which the DoE and CSMC assesses the data from the monitoring sites.

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COCKBURN SOUND MANAGEMENT COUNCIL

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Depth limit transect locations: Site number Site name Area Zone Easting Northing Commenced

Tr1 Woodman Point N/A 50H 379155 6443652 18/02/1998

Tr2 Garden Island North High Protection 50H 375611 6441182 18/02/1998

Tr3 Garden Island South High Protection 50H 376260 6436319 23/04/1998

Tr4 Warnbro Sound N/A 50H 381687 6420622 17/02/1998

Sample site location map (see over):

Page 27: EEEEnnnnvvviiiirrrroooonnnmmmmeeeennnnttttaaaallll ...members.ozemail.com.au/~arie99/environment/Owen... · Phytoplankton Species Collected at sites CS5, CS8, CS9, CS10N, CS11, CS12,

COCKBURN SOUND MANAGEMENT COUNCIL

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Map 5: Sample and Transect sites of the Annual Survey of Selected Seagrass Meadows in

the Fremantle- Warnbro Sound Region.

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COCKBURN SOUND MANAGEMENT COUNCIL

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Map 5a: Reference sites of the Annual Survey of Selected Seagrass Meadows in the Fremantle-Warnbro Sound Region.

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COCKBURN SOUND MANAGEMENT COUNCIL

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Frequency

Program Survey dates

Annually First two weeks in January

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Dominant seagrass species

- Visual observation of dominant seagrass species

- - -

Epiphyte characteristics

- Visual observation of epiphyte characteristics (encrusting or filamentous) and composition

- - -

Rhizome mat - Visual observation of presence or absence of dead rhizome material in sediment below the depth of present seagrass growth

- - -

Coloniser species

- Visual observation of presence or absence of coloniser seagrass species

- - -

Videography - A circular transect of 5m radius around the central star picket, commencing due east, at approximately 1m above the sediment. Close up footage of benthos

- - -

In situ: permanent quadrats A tape measure is attached to a central star picket in the sediment. The diver then swims holding the tape measure and following a pre-determined compass bearing until a pre-determined distance is reached and locates the start of one of the four 10 m transects located at the site. The transects are labeled with cable ties, the start (0m) picket having 1-4 cable ties fastened through the star pickets and the end having 1-4 cable ties attached as loose loops. Each of the permanent quadrat sites is marked with a metal picket. Transect 1 has 1 cable tie at each end, transect 2 has 2 cable ties at each end, and so on. The diver attaches a tape or pre-marked rope at the start of the transect and extends this to the end. At the predetermined distances along the transect, a purpose-made stainless steel quadrat is placed over four permanent markers located in the sediment. Shoot density measurements are taken for each of 6 quadrats on each of the 4 transects at each site. It should be noted that there was a change in methodology over 2003-05 as fixed quadrats were introduced and the degree of replication increased. Under the new approach there are 24 permanent quadrats and all zero shoot density counts are recorded.

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COCKBURN SOUND MANAGEMENT COUNCIL

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In situ: depth limit transects A rope with marked 2m increments is placed along the transect between the first and last picket. The bottom right corner of a quadrat is lined up with the increment on the rope. The placement of the quadrat is commenced at the shallow end of the transect on the left-hand side and repeated at every 2m increment as marked on the rope.

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Seagrass species

- Visual observation to determine each seagrass species present

- - -

Seagrass shoot density

shoots/0.04m2

Counts of number of seagrass shoots (of each species) within 20cm x 20cm quadrat

- - -

Seagrass shoot height

cm Measurement of maximum seagrass shoot height (of each species) within 20cm x 20cm quadrat

- - -

Depth m - - - -

Videography - The full length of the transect, at approximately 1m above the sediment

- - -

Laboratory: Edith Cowan University – Centre for Ecosystem Management

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Seagrass dry weight>

g/0.01m2

Above ground seagrass biomass in 10cm x 10cm quadrat square is harvested

Sample is dried at 80oC until constant weight (usually 24hrs)

- -

Epiphyte dry weight>

g/0.01m2

Above ground epiphyte biomass (scraped from leaves) in 10cm x 10cm quadrat square is harvested

Sample is dried at 80oC until constant weight (usually 24hrs)

- -

Epiphyte ash free dry weight>

g/0.01m2

Above ground epiphyte biomass (scraped from leaves) in 10cm x 10cm quadrat square is harvested

Sample is dried at 80oC until constant weight, then placed in muffle furnace at 550oC for 1hr, then desiccated until ambient temperature is obtained, then weighed (glucose correction factor sometimes applied)

- -

> These parameters are no longer measured following a review of the program in 2004-05

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COCKBURN SOUND MANAGEMENT COUNCIL

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Environmental Waters Microbiological Monitoring Program

Custodian Department of Health Objective 1. To undertake water quality monitoring in recreational areas within Cockburn

Sound to establish the degree of microbiological contamination.

2. To identify trends in the microbial quality of recreational waters within Cockburn Sound. 3. To provide advice to the public on microbial water quality.

Sampling Fieldwork: Department of Health Site locations (Datum: AGD 84): Site number Site name Area Zone Easting Northing Commenced

EV3/ 753* North Hymus Street High Protection 50H 378610 6428336 8/11/2006

EV3/ 750* Palm Beach (next to jetty) High Protection 50H 379065 6428345 15/12/2003

EV3/ 701* Rockingham Beach High Protection 50H 380192 6428355 13/07/1998

EV3/ 751 Kwinana Beach (on beach) Moderate Protection 50H 382745 6431348 15/12/2003

EV3/ 706 Naval Base Moderate Protection 50H 384366 6438708 13/07/1998

EV3/ 752 Jervoise Bay Beach Moderate Protection 50H 381714 6443717 15/12/2003

EV3/709^ Coogee Beach Owen Anchorage 50H 383134 6446436 13/07/1998

EV3/710^ Robbs Jetty Owen Anchorage 50H 382445, 6448656 13/07/1998

*These sites align with the following City of Rockingham sample sites: EV3/701~ RK3/002; EV3/753~ RK3/005 and EV3/750 ~ RK3/004 and are sampled fortnightly but alternate weeks to each other. ^ These sites align with the following City of Cockburn sample site : EV3/709 ~ CK3/994, EV3/710 ~ CK3/995. Data from these sites were not incorporated into the Cockburn Sound Report Cards for 2006/2007 as they occur in Owen Anchorage.

Site location map (see over):

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COCKBURN SOUND MANAGEMENT COUNCIL

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Map 6: Sample sites of the Department of Health Environmental Waters Microbiological Monitoring Program

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COCKBURN SOUND MANAGEMENT COUNCIL

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Frequency

Program Survey dates

Summer Fortnightly (November – April)

Parameters and methods Samples for laboratory analysis: PathWest - Water Examination Laboratory (NATA accredited

laboratory; Accreditation No. 2858)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Enterococci (confirmed)

MPN/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of sample is aliquoted and the Enterolert reagent powder is added. Once dissolved the contents are added to a Quanti – Tray. This is placed through a sealer, which seals all the liquid in the 49 large and 48 small wells. The Quanti – Tray is then incubated at 41°C for 24 hours. Following incubation the Quanti - Tray is removed from the incubator and examined under ultra-violet light. The number of fluorescent wells is counted and compared to the Quanti - Tray Most Probable Number charts and a final result obtained on the number of Enterococci present in the sample per 100mL. The Enterolert method uses 4-methylumbelliferyl-β-D-glucoside (MUG) as the defined substrate nutrient indicator. This compound, when hydrolysed by Enterococcal- β-glucosidase, releases 4-methylumbelliferone which exhibits fluorescence under UV365 lamp.

- 10MPN/100mL

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COCKBURN SOUND MANAGEMENT COUNCIL

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City of Cockburn Microbiological Monitoring Program

Custodian City of Cockburn Objective 1. To monitor the recreational water quality of Jervoise Bay and ensure

compliance with the ANZECC Australian Water Quality Guidelines for Fresh & Marine Waters 1992.

2. To identify trends in the microbial quality of recreational waters within Cockburn Sound. 3. To provide advice to the public on microbial water quality.

Sampling Fieldwork: City of Cockburn Site locations: (Note: easting and northings obtained from site points hand drawn on a hard copy map)

Site number Site name Area Zone Easting Northing Commenced

CK3/990 Jervoise Bay Boat Ramp Moderate Protection 50H 383332.72 6443488.54 1994

CK3/992 Woodman Point High Protection 50H 382815.16 6443818.61 1994

CK3/999^ John Graham Reserve High Protection 50H 382971 6445122 2006

CK3/944*† Coogee Beach Owen Anchorage 50H 383134 6446436 2006

CK3/996* Jerviose Bay Beach Moderate Protection 50H 381714 6443717 2006

CK3/995*† Robbs Jetty Owen Anchorage 50H 382445, 6448656 2006

^ Data from this site was not included in the Report Cards for 2006/2007. * These sites align with the following Department of Health sample site: CK3/944 ~ EV3/709, CK3/996 ~ EV3/ 752, CK3/995 ~ EV3/710. Data from these site was not included in the Report Cards for 2006/2007. † Data collected from these sites have not been incorporated into the Cockburn Sound Report Cards for 2006-2007 as these sites occur in Owen Anchorage.

Old Site locations:

CK3/991* Jervoise Bay Dog Beach Moderate Protection 50H 383462.49 6443469.03 1994– 2007

CK3/993* Jervoise Bay Boat Club Moderate Protection 50H 383203.94 6443550.06 1994-2007

* Sampling ceased at these site on 12/02/07 due to duplication of data. Site location map (see over):

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COCKBURN SOUND MANAGEMENT COUNCIL

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Map 7: Sampling sites of the City of Cockburn Microbiological Monitoring Program.

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COCKBURN SOUND MANAGEMENT COUNCIL

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Frequency

Program Survey dates

Microbiological monitoring Monthly up to 5/12/06 – Fortnightly from 5/12/06 to coincide with DOH sites sampling routine.

Parameters and methods Samples for laboratory analysis: PathWest - Water Examination Laboratory (NATA accredited

laboratory; Accreditation No. 2858)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Enterococci (confirmed)

MPN/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of sample is aliquoted and the Enterolert reagent powder is added. Once dissolved the contents are added to a Quanti – Tray. This is placed through a sealer, which seals all the liquid in the 49 large and 48 small wells. The Quanti – Tray is then incubated at 41°C for 24 hours. Following incubation the Quanti - Tray is removed from the incubator and examined under ultra-violet light. The number of fluorescent wells is counted and compared to the Quanti - Tray Most Probable Number charts and a final result obtained on the number of Enterococci present in the sample per 100mL. The Enterolert method uses 4-methylumbelliferyl-β-D-glucoside (MUG) as the defined substrate nutrient indicator. This compound, when hydrolysed by Enterococcal- β-glucosidase, releases 4-methylumbelliferone, which0 exhibits fluorescence under UV365 lamp.

- 10MPN/100mL

*Thermotolerant coliforms (presumptive)

cfu/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of the sample is filtered through a membrane filter with a pore size 0.45 µm. The membrane is placed on Membrane Lauryl Sulphate agar (which contains lactose and an acid indicator) and incubated at 30°C for 4 to 6 hours for resuscitation of the bacteria and then at 44°C to 44.5°C for 14 to 16 hours. Colonies, corresponding to the viable organisms, grow on the filter and are counted. All flat lemon yellow colonies, 1 to 2mm in diameter that grow on the filter, are counted as presumptive Thermotolerant Coliform organisms. Results are expressed as colony-forming units present in 100ml of sample.

-

2cfu/100mL

* Only Enterococci measured from 12/02/07 as instructed by the Department of Health

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COCKBURN SOUND MANAGEMENT COUNCIL

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City of Rockingham Microbiological Monitoring Program

Custodian City of Rockingham Objective 1. To undertake water quality monitoring in recreational areas within Cockburn

Sound to establish the degree of microbiological contamination.

2. To identify trends in the microbial quality of recreational waters within Cockburn Sound. 3. To provide advice to stakeholders on microbial water quality. 4. To gather data to assist decision-making on initiatives which will improve the coastal waters for all users.

Sampling Fieldwork: City of Rockingham Site locations: (Note: easting and northings obtained from site points hand- drawn on a hard copy map) Site number Site name Area Zone Easting Northing Commenced

RK3/002* Rockingham Jetty High Protection Area 50H 380192 6428355 20/12/05

RK3/004* Palm Beach High Protection Area 50H 379065 642345 20/12/05

RK3/005* North Hymus Street High Protection Area 50H 378610 6428336 20/12/05

RK3/001^ South CBH High Protection Area 50H 381917 6429982 1986

RK3/006^ Education Department Camp (Point Peron)

High Protection Area 50H 376677 6429079 1986

*These sites were aligned with Department of Health sites in December 05 and are sampled fortnightly but alternate weeks to each other. They align with the following Department of Health sites: RK3/002 ~ EV3/701; RK3/004 ~EV3/700 and RK3/005 ~ EV3/753 ^These sites are sampled approximately every three months and are not used in the development of the Report Cards. Site location map (see over):

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Map 8: Sampling sites of the City of Rockingham Microbiological Monitoring Program.

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Frequency

Program Survey dates

Summer Fortnightly (November – April)

Parameters and methods Samples for laboratory analysis: PathWest - Water Examination Laboratory (NATA accredited

laboratory; Accreditation No. 2858) Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of

Reporting

*Thermotolerant coliforms (presumptive)

cfu/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of the sample is filtered through a membrane filter with a pore size 0.45 µm. The membrane is placed on Membrane Lauryl Sulphate agar (which contains lactose and an acid indicator) and incubated at 30°C for 4 to 6 hours for resuscitation of the bacteria and then at 44°C to 44.5°C for 14 to 16 hours. Colonies, corresponding to the viable organisms, grow on the filter and are counted. All flat lemon yellow colonies, 1 to 2mm in diameter that grow on the filter, are counted as presumptive Thermotolerant Coliform organisms. Results are expressed as colony-forming units present in 100ml of sample.

- 2cfu/100mL

Enterococci (confirmed)

MPN/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of sample is aliquoted and the Enterolert reagent powder is added. Once dissolved the contents are added to a Quanti – Tray. This is placed through a sealer, which seals all the liquid in the 49 large and 48 small wells. The Quanti – Tray is then incubated at 41°C for 24 hours. Following incubation the Quanti - Tray is removed from the incubator and examined under ultra-violet light. The number of fluorescent wells is counted and compared to the Quanti - Tray Most Probable Number charts and a final result obtained on the number of Enterococci present in the sample per 100mL. The Enterolert method uses 4-methylumbelliferyl-β-D-glucoside (MUG) as the defined substrate nutrient indicator. This compound, when hydrolysed by Enterococcal- β-glucosidase, releases 4-methylumbelliferone, which exhibits fluorescence under UV365 lamp.

- 10MPN/100mL

* Only Enterococci measured in 2006-07

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Defence Microbiological Monitoring Program

Custodian Department of Defence together with Department of Health Objective For the protection of people who come into frequent and direct contact with

the water during activities such as swimming (according to ANZECC guidelines for recreational water use (primary)). Sample collection by Department of Defence. Analysis and evaluation is the primary responsibility of the WA Department of Health.

Sampling Fieldwork: MPL Health Safety Environment Site locations (Datum WGS 84):

Site number Site name Area Zone Easting Northing Commenced

EV3/740 Careening Bay Moderate Protection 50H 376763 6433711 12/5/1996

EV3/741 Cliff Head High Protection 50H 375213 6438078 12/5/1996

EV3/742 Pig Trough Bay High Protection 50H 374539 6441028 12/5/1996

EV3/743 Herring Cove N/A 50H 373808 6440825 12/5/1996

Site location map (see over):

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Map 9: Sampling sites of the Department of Defence Microbiological Monitoring Program.

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Frequency

Program Survey dates

Microbiological Monitoring.

All Garden Island sites.

Monthly

Parameters and methods Samples for laboratory analysis: PathCentre - Water Examination Laboratory

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Thermotolerant coliforms

CFU/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of the sample is filtered through a 0.45 µm membrane filter. The membrane is placed on Membrane Lauryl Sulphate agar (which contains lactose and an acid indicator) and incubated at 30°C for 4 to 6 hours for resuscitation of the bacteria and then at 44°C to 44.5°C for 14 to 16 hours. Colonies, corresponding to the viable organisms, grow on the filter and are counted. All flat lemon yellow colonies, 1 to 2mm in diameter that grow on the filter, are counted as presumptive Thermotolerant Coliform organisms

- 2CFU/100mL

Enterococci MPN/100mL Grab samples collected at waist depth from approximately 30cm below the water surface – 250ml sterilised container – stored on ice until analysis

A test portion of sample is aliquoted and the Enterolert reagent powder is added. Once dissolved the contents are added to a Quanti – Tray. This is placed through a sealer, which seals all the liquid in the 49 large and 48 small wells. The Quanti – Tray is then incubated at 41°C for 24 hours. Following incubation the Quanti - Tray is removed from the incubator and examined under ultra-violet light. The number of fluorescent wells is counted and compared to the Quanti - Tray Most Probable Number charts and a final result obtained on the number of Enterococci present in the sample per 100mL.

- 10MPN/100mL

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Defence TBT and Heavy Metals Monitoring Program

Custodian Department of Defence

Objective Long term monitoring of specific areas of potential environmental concern

associated with historical activities, in order to identify trends and possible requirements for management response.

Sampling Fieldwork: Defence (Australian Clearance Dive Team Four). Site locations (Datum: WGS 84):

Site number Site name Area Zone Easting Northing Commenced

1 Beacon Head High Protection 50H 374659 6442658 1989

2 Armaments Wharf High Protection 50H 375567 6439303 1989

3B Colpoys Point High Protection 50H 378101 6433348 1998

5 Parkes Wharf Moderate Protection 50H 376944 6433655 1989

6 Captains Landing Moderate Protection 50H 376780 6433681 1989

6B Diamantina Pier Moderate Protection 50H 376820 6433543 1998

6C Diamantina Pier Moderate Protection 50H 376799 6433524 2004

7 Off Slipway Moderate Protection 50H 376415 6433310 1989

9 Small Ships Harb.1 Moderate Protection 50H 376512 6433317 1989

12 Small Ships Harb.2 Moderate Protection 50H 376362 6433198 1989

11 Magnetic Treatment Facility/South of SS Harbour

Moderate Protection 50H 376611 6433105 1989

13 Causeway High Protection 50H 377683 6431458 1993

14 Careening Bay 1 Moderate Protection 50H 376892 6432413 1998

15 Careening Bay 2 High Protection 50H 377585 6432183 1998

16 Southern Flats 1 High Protection 50H 378366 6432062 1998

17 Southern Flats 2 High Protection 50H 379786 6430675 1998

Site Location Map (see over):

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Map 10: Sampling sites of the Department of Defence TBT and Heavy Metals Monitoring Program.

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Frequency

Program Survey dates

Annually Spring (Once in September, October or November)

Parameters and methods Samples for laboratory analysis: Defence Science & Technology Organisation (DSTO)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

TBT in Mussel Flesh

ng Sn/g wet wt

Collection of mussels from depth of approx 1m on piles or on the lower surface of the buoys. A minimum of 15 mussels with a shell length of approximately 5cm, preferably collected as a clump. Clumps are drained to remove excess water then placed in plastic bags & stored on wet ice for overnight dispatch to DSTO, Melbourne.

At DSTO, 5 mussels/site measured, shucked and frozen pending analysis; 4 analysed, 1 spare.

Analysis: Hydridization, GC-FPD

- -

Samples for laboratory analysis: CSIRO, Centre for Environmental Contaminants Research,

Lucas Heights NSW (Note: due to temporary laboratory closure, 2005 samples were sent to National Measurement Institute, Pymble, NSW).

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of

Reporting

Heavy Metals

Copper

mg Cu/kg, wet wt

Collection of mussels from depth of approx 1m on piles or on the lower surface of the buoys. A minimum of 15 mussels with a shell length of approximately 5cm preferably collected as a clump. Clumps are drained to remove excess water then placed in plastic bags & stored on wet ice for overnight dispatch to DSTO, Melbourne.

At DSTO, 5 mussels/site measured, shucked and frozen pending analysis; 4 sent to CSIRO for analysis, 1 spare.

Preparation: CAAC/P11a Analysis: CAAC/MS5; CAAC/AFS03

-

0.1 mg/kg

Zinc mg Zn/kg As above As for copper - 0.1 mg/kg

Arsenic mg As/kg As above As for copper - 0.1 mg/kg

Cadmium mg Cd/kg As above As for copper - 0.05 mg/kg

Lead mg Pb/kg As above As for copper - 0.01 mg/kg

Mercury mg Hg/kg As above As for copper - 0.005 mg/kg

Tin mg Sn/kg As above As for copper - 0.01 mg/kg

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Western Australian Shellfish Quality Assurance Program (WASQAP)

Custodian Department of Fisheries (DoF) and Department of Health (DoHWA) together

with the W.A. Mussel Producers Association (WAMPA) Objective To ensure compliance with the Western Australian Shellfish Quality Assurance

Program (WASQAP) for the commercial harvest of aquacultured bivalve molluscs. Full details of the program are available in the 2007 WASQAP Operations Manual, available from the DoF.

Sampling Fieldwork: WAMPA personnel, under supervision by DoF Marine and Fisheries Officers.

1. Mussel harvest areas sampled all year (Kwinana Grain Terminal and Southern Flats). Site locations (Datum: GDA94 datum approximates WGS84):

Site number Site name Area Zone Easting Northing Commenced

KGT 1 Kwinana Grain Terminal 1

High Protection 50H 380753 6430675 1994

KGT 2 Kwinana Grain Terminal 2

High Protection 50H 383337 6430036 1994

KGT 3 Kwinana Grain Terminal 3

High Protection 50H 381995 6430703 1994

KGT 4 Kwinana Grain Terminal 4

High Protection 50H 382003 6431588 1994

KGT 5 Kwinana Grain Terminal 5

High Protection 50H 380940 6430217 1994

SF6 Southern Flats 6 High Protection 50H 377643 6429162 2001

SF8 Southern Flats 8 N/A 50H 376232 6430699 2001

SF9 Southern Flats 9 High Protection 50H 378121 6432228 2001

SF10 Southern Flats 10 High Protection 50H 379879 6430711 2001

SF11 Southern Flats 11 High Protection 50H 379446 6432042 2001

MB12 (SF12*) Mangles Bay 12 High protection 50H 378165 6429369 2005

* SF12 was changed to MB12 in 2007 as the site occurs in Mangles Bay not on Southern Flats.

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2. Short term Mussel harvest sites sampled on short term basis in accordance with harvesting regimes (Garden Island and Warnbro Sound)

Site number Site name Area Zone Easting Northing Commenced

GI 1 Garden island 1 N/A 50H 376475 6442297 2004

GI 2 Garden island 2 High Protection 50H 375842 6441365 2004

GI 3 Garden island 3 High Protection 50H 375044 6441042 2004

GI 4 Garden Island 4 N/A 50H 375485 6442285 2004

GI 5 Garden Island 5 High Protection 50H 375663 6441862 2004

WS3 Warnbro Sound 3 N/A 50H 379277 6419930 2004

WS4 Warnbro Sound 4 N/A 50H 378040 6421052 2004

WS6 Warnbro Sound 6 N/A 50H 378670 6418856 2004

WS7 Warnbro Sound 7 N/A 50H 380326 6421074 2004

WS8 Warnbro Sound 8 N/A 50H 379472 6418655 2004

These sites are sampled in accordance with mussel harvesting strategies. These sites are sampled 2-4 weeks prior to the commencement of harvesting to ensure that WASQAP criteria has been met and then weekly until harvesting has ceased.

Modelling sites: Site number Site name Area Zone Easting Northing Commenced

SL1 Shore Line 1 High Protection 50H 381765 6429772 1994

SL2 Shore Line 2 Moderate Protection 50H 382230 6430321 1994

SL3 Shore Line 3 Moderate Protection 50H 382579 6430830 1994

KGTA Kwinana Grain Terminal A Moderate Protection 50H 382200 6430345 1994

KGTB Kwinana Grain Terminal B Moderate Protection 50H 381871 6430526 1994

KGTC Kwinana Grain Terminal C High Protection 50H 381445 6430968 1994

These sites are used for modelling and not for routine analysis. These sites have not been sampled in the previous five years.

Site Location Map (see over):

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Map 11: Sampling sites of the Western Australian Shellfish Quality Assurance Program (WASQAP).

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Map 11a: Garden Island Mussel Harvesting Sites of the Western Australian Shellfish Quality Assurance Program (WASQAP).

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Map 11b: Warnbro Sound Mussel Harvesting Sites of the Western Australian Shellfish

Quality Assurance Program (WASQAP).

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Frequency

Program Survey dates

1a. Phytoplankton in water and algal biotoxins (ASP, PSP and DSP biotoxins) in flesh.

Fortnightly for phytoplankton samples, biotoxin monitoring as required and dependent on phytoplankton levels. Sites KGT3, SF11 and WS3.

1b. Biotoxin Sampling to maintain export access to European Union (ASP, DSP and PSP biotoxins).

Monthly during October to March and once in June. Mussel samples from KGT and SF harvest areas (this program currently suspended).

2. Bacteriological tests in growing waters and mussel flesh.

13 sample times each year randomly generated. Sites KGT1-5, WS1-4, WS6, SF6, and SF8-12.

3. Chemical Testing of Mussel Flesh. Annually in December. Mussel samples from KGT and SF harvest areas.

4. Adverse Sampling Strategy (ASS). Bacteriological tests in growing waters and mussel flesh.

24-48 hours after adverse conditions are deemed to have occurred.

Parameters and methods Samples for laboratory analysis: Dalcon Environmental (phytoplankton) (accredited by National

Proficiency Testing) Cawthron Institute (biotoxins) (accredited under IANZ).

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of

Reporting

Phytoplankton cells/L 10L integrated 5 m water column sample at KGT3, SF11 and GI 5 kept fresh.

Samples are filtered through a 10um phytoplankton net and concentrated to 11mL. The concentrate is then filtered through a 0.8um cellulose nitrate membrane under positive pressure. The material retained on the membrane is resuspended in 10mL of filtered seawater.

A 0.11mL subsample is then placed on a Palmer-Maloney Nanoplankton counter and 4 transects across the diameter of the chamber are scanned and the species identified and enumerated quantitatively

- 74cells/L

Mussel Flesh - Algal Biotoxins

mg/kg For general phytoplankton sampling mussels samples taken concurrently with water samples are stored chilled for 48hrs until counts are known and its is determined if toxin testing is required. The sample is then frozen and stored for a further six months.

Flesh is tested for the relevant biotoxin if phytoplankton levels are double the trigger level or above the threshold on two consecutive sampling dates.

Paralytic Shellfish Toxin Method – AOAC 15th Edition Section 959.08 (Mouse)

Amnesic Shellfish Poisoning – Liquid chromatography/mass spectrometry (LCMS) method

Diarrhoetic Shellfish Poisoning – LCMS method

- -

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Samples for laboratory analysis: Cawthron Institute (algal biotoxins) (accredited under IANZ). Parameter Units Sampling Laboratory Analysis

Method Accuracy Limit of

Reporting

Biotoxin Sampling to maintain EU access.

mg/kg Flesh samples from KGT and SF are analysed monthly from October to March and also in June.

As above - -

Samples for laboratory analysis: PathCentre (NATA accreditation No. 2858)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Water samples

Total coliforms

One 200ml water sample is collected at sites KGT 1-5, SF 6, 8-11 and GI1-5) in accordance with ‘Microbiological Sampling and Monitoring of Environmental Waters’ produced by the Applied Environmental Health section of the Department of Health WA. This guideline incorporates the Australian Standard ASNZF 5667.9-1998 Part 9 Guidance on Sampling from Marine Waters. All sites samples.

AS 4276.5-1995 (MF:coliforms)

- -

Thermotolerant coliforms

‘’ AS 4276.7-1995 (MF: Thermotolerant coliforms and E.coli)

- -

E. coli ‘’ AS 4276.7-1995 (MF: Thermotolerant coliforms and E.coli)

- -

Flesh samples

E. coli

(and Salmonella)

CFU/100mL

Approx 30 mussel shells are collected in each of two sterile bags. One bag is submitted for analysis whilst the other is frozen and held for six months. From the samples, two 100g of mussel tissue are taken and submitted for bacterial sampling from sites KGT North, KGT South, SF and GI. If E.coli is present at levels >2.3cfu.g-1, then samples are also tested for Salmonella.

AS1766.2.3-1992 (MPN: coliforms and E. coli)

Salmonella if E.coli present above threshold levels: AS 1766.2.5-1991 (Salmonella)

- -

Standard Plate Count

As above AS1766.2.1-1991 (Standard Plate Count)

- -

Samples for laboratory analysis: National Measurement Institute (accredited by NATA).

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Mussel Flesh – Inorganic arsenic, copper, zinc, cadmium, lead, mercury. At the discretion of the WASQAP Program Manager shellfish samples may be taken for tributyltin (TBT)

mg/kg One sample from each SF, KGT and GI sites.

AAAS, HPLC-FL, HPLC-UV

- -

Mussel Flesh – organochlorine (OC), organophosphate (OP), pesticides, polychlorinated biphenyls (PCB’s)

mg/kg One sample from each SF, KGT and GI.

HPLC-FL, HPLC-UV

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Perth Seawater Desalinisation Plant Water Quality Monitoring Program

Custodian Water Corporation Objective In compliance with:

Ministerial Condition No. 655: 2 – Water Quality Management Plan with the objective ‘To ensure protection of the water quality of Cockburn Sound’, and Ministerial Condition No. 655: 10- Whole of Effluent Toxicity Testing with the objective ‘To ensure that the discharge complies with the requirements of the Cockburn Sound Environmental Protection Policy and the Revised Environmental Quality Criteria Reference Document (Cockburn Sound)’.

Sampling Fieldwork: Oceanica, MAFRL and Geotechnical Services are undertaking the sampling

program on behalf of Water Corporation Site locations (Datum WGS84):

Site number Site name Area Zone Easting Northing Commenced

Water Quality Monitoring

WC1 West of diffuser – Calista Channel Low Protection 50H 383219 6436947 Feb 2005

WC2 North diffuser – Calista Channel High/Mod Protection 50H 383465 6437515 Feb 2005

WC3 South edge mixing zone - Kwinana Beach

High/Mod Protection 50H 383465 6436810

Feb 2005

WC4 Deep water north High Protection 50H 376829 6441686 Feb 2005

WC5 Deep water south High Protection 50H 379337 6436947 Feb 2005

WC6 Warnbro – north N/a 50H 378141 6421346 Feb 2005

WC7 Warnbro - south N/a 50H 379741 6421498 Feb 2005

WC8 North Garden Island N/a 50H 372954 6443318 Feb 2005

Transect (incl 6 vertical profiles)

WCTR1 Calista Channel Moderate Protection 50H 383397 6436886 Feb 2005

WCTR2 Calista Channel Moderate Protection 50H 383301 6436918 Feb 2005

WCTR3 Calista Channel Moderate Protection 50H 383187 6436658 Feb 2005

WCTR4 Calista/Stirling Channel High/ModProtection 50H 382919 6436254 Feb 2005

WCTR5 Stirling Channel High Protection 50H 382182 6436132 Feb 2005

WCTR6 Stirling Channel Approach High Protection 50H 380799 6436487 Feb 2005

Dissolved Oxygen Sensors

DO1 North Cockburn Sound High Protection 50H 377185 6441562 May 2005

DO2 Central Cockburn Sound High Protection 50H 379350 6436982 May 2005

DO4 Diffuser site –East CS Moderate Protection 50H 383640 6436812 May 2005

DO7 South Cockburn Sound High Protection 50H 380136 6429906 May 2005

Site Location Map:

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Map 13: Sampling sites for the Perth Seawater Desalination Monitoring Program

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Map 13a: Dissolved Oxygen sensors and Transect sites for the Perth Seawater Desalination Monitoring Program

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Map 13b: Comprehensive Macrobenthic Baseline Survey Locations for the Perth Seawater Desalination Monitoring Program. (Map provided by Water Corporation)

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Map 13c: Dissolved Oxygen, Temperature, Conductivity and Wind Real Time Monitoring locations for the Perth Seawater Desalination Monitoring Program. (Map provided by Water

Corporation 2006)

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Frequency

Program Survey dates

Water Quality A total of nine sampling occasions per year. Twice in Summer; Autumn; Winter; Spring and once following a calm period (Feb - June). Sampling started in February 2005. Sites WC1 – WC8 and transect (additional six profiles).

Sediment Habitat (inc. fauna) Comprehensive macrobenthic investigation underway. Pilot study complete in January 2006, comprehensive baseline study field collection completed in April 2006. Annual monitoring for a period of three years. Some 80 sites have been sampled as part of the comprehensive baseline program, comprising 77 sites in Cockburn Sound and three sites in Warnbro Sound.

Whole of Effluent Toxicity (WET)

First sample completed in 2005 from simulated brine (during design phase), second sample in 2006 and third sample after commissioning in 2006/2007. Site No.WC1

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Water Quality Monitoring

Turbidity

NTU

In situ - Vertical profiles at 0.1m intervals or less. Using YSI6600

-

± 5%

0.1

TSS – Total suspended solids

mg/L Filtered in field on preweighed filters Gravimetric APHA 2540D

0.5 mg/L

Conductivity (salinity)

TDS- Total dissolved solids

ppt/psu

mg/L

In situ - Vertical profiles at 0.1m intervals or less. Using YSI6600

Sampled 1m below surface and 0.5m above the bottom using a niskin bottle

-

Gravimetric APHA 2540C

± 0.1psu 0.1ppt

DO mg/L In situ - Vertical profiles at 0.1m intervals or less. Using YSI6600

- ± 0.2mg/L 0.2 mg/L

pH units In situ - Vertical profiles at 0.1m intervals or less. Using YSI6600

- ± 0.2units -

Temperature oC In situ - Vertical profiles at 0.1m intervals or less. Using YSI6600

- ± 0.15 oC -

light (light attenuation and secchi)

micro-einstiens and metres

Light sensors (LI1400) at depths 1m and 7mand secchi disk diameter 200mm

Calculated from the log10 of the irradiance values at both depths.

-

-

Habitat and

Benthos Benthic Macrofauna Sediment Habitat

- -

Fifteen Benthic macrofauna grab samples were collected from each site using a 0.1m2 Van Veen Grab.

Underwater Video imagery collected along 10 haphazardly located replicate transects at least 100m in length.

-

-

- -

- -

Meteorological observations

Wind (direction and speed);

water levels (hrly intervals);

estimated Swan Rv out flow data.

knots

Anemometer located on the northern and southern real time monitoring stations

-

±2knots

-

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Water quality samples for laboratory analysis: MAFRL

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

TN- total nitrogen

µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and transported on ice

Automated flow injection analyser

MAFRL Method 2700

±14% 50µg/L

NO3 – Nitrate µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle. Filtered in field <0.45um and transported on ice

Automated flow injection analyser

MAFRL Method 2100

±14% 2µg/L

NO2 - Nitrite µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle. Filtered in field <0.45um and transported on ice

Automated flow injection analyser

MAFRL Method 2200

±14% 2µg/L

NH3+NH4 – Ammonia

µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle. Filtered in field <0.45um and transported on ice

Automated flow injection analyser

MAFRL Method 2000

±14% 3µg/L

TP- Total Phosphorus

µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and transported on ice

Automated flow injection analyser

MAFRL Method 4700

±14% 5µg/L

PO4- Ortho-Phosphate

µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle. Filtered in field <0.45um and transported on ice

Automated flow injection analyser

MAFRL Method 4100

±14% 2µg/L

TOA – Total organic alcohol

µg/L Not initially undertaken. To be advised when sampling proceeds.

Gas chromatography 0.5µg/L

TOC – Total organic carbon

Mg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and transported on ice in glass containers

Automated combustion analyser (non-purgeable carbon)

MAFRL Method 6000

±14% 0.5 mg/L

COD – Chemical oxygen demand

mg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and transported on ice

Sub-contracted to the chemistry centre

±15% 5mg/L

Metals:

Al

µg/L

Undertake dissolved toxicant sampling at both the surface and bottom depths at each eight sites and filtered in the field <0.45um

ICP-OES (WA Chem Centre method iMET1WCICP)

±14%

5µg/L

As µg/L “ Hydride generated AES-ICP method ICP004

±11% 0.4µg/L

Cd µg/L “ AES-ICP analysis method ICP001

±14% 0.6µg/L

Cr µg/L “ AES-ICP analysis method ICP001

±14% 1µg/L

Cu µg/L “ AES-ICP analysis method ICP001

±14% 1µg/L

Fe µg/L “ AES-ICP analysis method ICP001

±14% 2µg/L

Pb µg/L “ ICP-MS (WA Chem Centre method iMET1WCMS)

±14% 1µg/L

Mn µg/L “ AES-ICP analysis method ICP001

±14% 0.5µg/L

Mo µg/L “ AES-ICP analysis method ICP001

±14% 4µg/L

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Hg µg/L “ Cold vapour generated AES-ICP method ICP006

±9% 0.1µg/L

Ni µg/L “ AES-ICP analysis method ICP001

±14% 4µg/L

Se µg/L “ Hydride generated AES-ICP method ICP004

±9% 0.2µg/L

V µg/L “ AES-ICP analysis method ICP001

±14% 1µg/L

Zn µg/L “ AES-ICP analysis method ICP001

±14% 2µg/L

Chlorophyll a µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and filtered in field and transported on ice

Acetone Extraction

MAFRL Method 3000

±10% 0.1ug/L

Phaeophytin µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and filtered in field and transported on ice

Acetone Extraction

MAFRL Method 3000

±10% 0.1ug/L

Phytoplankton species

cells/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and preserved with Lugols solution

Sub contracted to Dalcon - 222 cells/L

Flourescence (calibrated to Chl.a)

µg/L Sampled 1m below surface and 0.5m above the bottom using a niskin bottle and transported on ice

Turner Designs Fluorometer

±10% 0.1µg/L

Sediment infauna sampling for laboratory analysis: (Oceanica and Dalcon)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Community structure

- 0.1m2 Van Veen Grab. (2 replicates)

0.5 mm sieve. Preserved in Ethanol. Hand Picked.

Taxanomic Identification Dalcon

±5% n/a

Sediment sampling for laboratory analysis: MAFRL

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Particle size

% 0.1m2 Van Veen Grab. Subcontracted to CSIRO - -

Metals:

Al

mg/kg dry wt

0.1m2 Van Veen Grab.

Extractable Aluminium by aqua regia digest and ICPAES MAFRL method ICP002

±26%

20 mg/kg dry wt

As mg/kg dry wt

“ Extractable Arsenic by aqua regia digest and HG-ICP-AES MAFRL method ICP004

±24% 0.05mg/kg dry wt

Cd mg/kg dry wt

“ Extractable Cadmium by aqua regia digest and ICPAES MAFRL method ICP002

±15% 0.06mg/kg dry wt

Cr mg/kg dry wt

“ Extractable Chromium by acid regia digest and ICPAES MAFRL method ICP002

±13% 0.2 mg/kg dry wt

Cu mg/kg dry wt

“ Extractable Copper by aqua regia digest and ICPAES MAFRL method ICP002

±11% 0.2 mg/kg dry wt

Fe mg/kg dry wt

“ Extractable Iron by aqua regia digest and ICPAES MAFRL method ICP002

±15% 5 mg/kg dry wt

Pb mg/kg dry wt

“ Extractable Lead by aqua regia digest and ICPAES

±11% 1mg/kg dry wt

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Mn mg/kg dry wt

“ Extractable Manganese by aqua regia digest and ICPAES MAFRL method ICP002

±9% 0.05mg/kg dry wt

Hg mg/kg dry wt

“ Extractable Mercury by aqua regia digest and CV-ICP-AES MAFRL method ICP007

±13% 0.01mg/kg dry wt

Mo mg/kg dry wt

“ Extractable Molybdenum by aqua regia digest and ICPAES MAFRL method ICP002

±25% 0.5 mg/kg dry wt

Ni mg/kg dry wt

“ Extractable Nickel by aqua regia digest and ICPAES MAFRL method ICP002

±16% 0.4 mg/kg dry wt

Se mg/kg dry wt

“ Extractable Selenium by aqua regia digest and HG-ICP-AES MAFRL method ICP004

±18% 0.02 mg/kg dry wt

V mg/kg dry wt

“ Extractable Vanadium by aqua regia digest and ICPAES MAFRL method ICP002

±19% 0.1 mg/kg dry wt

Zn mg/kg dry wt

“ Extractable Zinc by aqua regia digest and ICPAES MAFRL method ICP002

±12% 0.5 mg/kg dry wt

WET sampling for laboratory analysis: Geotechnical Services on behalf of Water Corporation

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Toxicity testing

TU – toxicity Unit

First sample completed in 2005 from simulated brine (during design phase), second sample in 2006 and third sample after commissioning in 2006/2007. Site No.1

The WET testing data is to be interpreted in terms of acute toxicity end-points (ie LC50 levels). LC50 -–lethal concentration that kills 50% of test organisms in a given time, usually after 96hrs for fish and 48hrs for some invertebrates. EC50 – effects concentration, is usually used when it is difficult to accurately determine mortality. Microtox, unicellular algal growth tests, macroalgae germination tests, copepod reproduction 21 day tests, pink snapper 7 day larval growth test.

N/A N/A

Real Time Monitoring System – telemetered data to the PSDP1. Commenced June 2006

• Dissolved Oxygen – at 0.5m off the bottom and at the midpoint. • Temperature - Measurements at three locations throughout the water column at 1m intervals

to the midpoint and at 2m intervals from the mid-point to the surface. • Conductivity - Measurements at three locations throughout the water column at 1m intervals

to the midpoint and at 2m intervals from the mid-point to the surface.

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Owen Anchorage Water Quality Monitoring Program

Custodian Cockburn Sound Management Council Objective To coordinate monitoring under the State Environmental (Cockburn Sound)

Policy 2005 and implement the Environmental Management Plan for Cockburn Sound and its Catchment 2005 (EMP).

Sampling Fieldwork: Marine and Freshwater Research Laboratory (MAFRL) Site locations (Datum WGS84 (GDA 94)):

Site number Site name Area Zone Easting Northing Commenced

0A1* Owen Anchorage 1 Owen Anchorage 50H 380966 6445329 08/12/2006

OA2* Owen Anchorage 2 Owen Anchorage 50H 373117 6446866 08/12/2006

OA3* Owen Anchorage 3 Owen Anchorage 50H 374151 6443307 08/12/2006

OA4* Owen Anchorage 4 Owen Anchorage 50H 380600 6444617 08/12/2006

OA5* Owen Anchorage 5 Owen Anchorage 50H 378300 6443971 08/12/2006

OA6* Owen Anchorage 6 Owen Anchorage 50H 377053 645032 08/12/2006

OA7* Owen Anchorage 7 Owen Anchorage 50H 380684 6447210 08/12/2006

OA8* Owen Anchorage 8 Owen Anchorage 50H 380210 6450842 08/12/2006

OA9* Owen Anchorage 9 Owen Anchorage 50H 383210 6446474 08/12/2006

OA10* Owen Anchorage 10 Owen Anchorage 50H 377726 6445947 08/12/2006

WSSB Warnbro Sound Safety Bay

Warnbro Sound 50H 378444 6424599 01/01/2001

WS4 Warnbro Sound Warnbro Sound 50H 379741 6421498 01/01/2001

* Data from these sites were not included in the 2006/2007 report cards as they occur in Owen Anchorage.

Site Location Map (see over):

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Map 14: Sampling sites for the Owen Anchorage Water Quality Monitoring Program

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Frequency

Program Survey dates

Water Quality Weekly from 8th December 2006 to 31st March 2007 (no sample was taken 25th Dec 06, Christmas Day or the 1st of Jan 07, New Years Day)

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Temperature oC in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.15 oC -

Salinity psu in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.1psu -

DO mg/L in situ – YSI 6600 multi-parameter sonde, surface and bottom

- ± 0.2mg/L -

Light attenuation

/m in situ – LI1400, irradiance measured at 1m and 7m below surface

Calculated from the logarithim10 of the irradiance values at both depths

-

pH units in situ – YSI multi-parameter sonde, surface and bottom.

- ± 0.2units 0 units

Samples for laboratory analysis: Marine and Freshwater Research Laboratory (MAFRL)

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Chlorophyll a µg/L Niskin collectors – surface, middle and bottom water combined for a single depth-integrated sample – 1.2µm GF/C filters

Method code - 3020 - 0.1µg/L

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Alcoa Nearshore Marine Survey

Custodian Alcoa of Australia Ltd Objective To investigate possible trace metal contamination of nearshore marine waters,

sediments and fauna of Cockburn Sound adjacent to the Alcoa World Alumina Australia refinery at Kwinana. The aim of the sampling is to maintain an ongoing database on background sediment and water quality data.

Sampling Fieldwork: Oceanica Consulting Pty Ltd Site locations (Datum WGS84 (GDA 94)):

Site number Area Zone Easting Northing Commenced

T1_10 Moderate Protection 50H 384485 6437650 1996

T1_40 Moderate Protection 50H 384445 6437645 1996

T2_10 Moderate protection 50H 384453 6437411 1996

T2_40 Moderate Protection 50H 384420 6437416 1996

T3_10 Moderate Protection 50H 384405 6437191 1996

T3_40 Moderate protection 50H 384364 6437233 1996

T4_10 Moderate Protection 50H 384071 6436191 1996

T4_40 Moderate Protection 50H 384033 6436181 1996

T5_10 Moderate protection 50H 384515 6438147 1996

T5_40 Moderate Protection 50H 384475 6438126 1996

T6_10 Moderate Protection 50H 384484 6438645 1996

T6_40 Moderate protection 50H 384459 6438637 1996

T7_10* Owen Anchorage 50H 382493 6448931 1996

T7_40* Owen Anchorage 50H 382443 6448914 1996

* Data from these sites were not included in the 2006/2007 report cards as they occur in Owen Anchorage.

Site Location Map (see over):

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Map 15: Sampling sites for the Alcoa Nearshore Marine Survey

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Frequency

Program Survey dates

Sediments, Water Quality and Fauna

The Nearshore surveys are conducted for Alcoa approximately every five years since 1996. Most recent survey was conducted in November 2006.

Parameters and methods In situ: Oceanica Ltd, Pty

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Water

Temperature oC A YSI probe was used to record water column profiles at each site.

-

-

-

Salinity psu A YSI probe was used to record water column profiles at each site.

- - -

pH units A YSI probe was used to record water column profiles at each site.

- - -

Samples for laboratory analysis: National Measurement Institute (NMI), marine and Freshwater

Research Laboratories (MAFRL) and CSIRO.

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Sediments

Metals and Metalloids

Arsenic (As); Cadmium (Cd); Chromium (Cr); Lead (Pb); Mercury (Hg); Nickel (Ni); Aluminium (Al); Copper(CU); Gallium (Ga); Iron(Fe); Manganese (Mn); Selenium (Se); Strontium (St); Thorium (Th); Molybdenum (Mo); Zinc (Zn)

mg/kg dry wt

EPA (2005) Standard Operating procedures. Five replicate samples were taken at each site. Each replicate sample comprised of a composite from 5 sub – samples of the top 2cm sediment from each of the four corners and centre of a 1m2 quadrate. Sediments were collected as cores.

ICP-MS/AES, ICP-AES low level analysis for Mercury and Selenium.

- 0.5 for majority, 0.01 for Mercury and 0.1 for Selenium

Total Organic Carbon % C Same as above. Dohrmann 190 TOC analyser

- 0.4

Tributyltin (TBT)

mg/kg

Same as above with the exception of one sample taken from each site, which was a composite sample of material from all five replicates.

GC-AED - 0.5

Sediment Grain Size %

Same as above with the exception of one sample taken from each site, which was a composite sample of material from all five replicates.

Laser diffraction and wet sieving

- 0.01%

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Water

Arsenic (As); Cadmium (Cd); Chromium (Cr); Lead (Pb); Mercury (Hg); Nickel (Ni); Aluminium (Al); Copper(CU); Gallium (Ga); Iron(Fe); Manganese (Mn); Selenium (Se); Strontium (St); Thorium (Th); Molybdenum (Mo); Zinc (Zn)

mg/kg dry wt

EPA (2005) Standard Operating procedures. Bottom water samples were taken.

ICP-MS/AES, ICP-AES low level analysis for Mercury and Selenium.

_ 0.5 for majority, 0.01 for Mercury and 0.1 for Selenium

Fauna

Metals and Metalloids

Arsenic (As); Cadmium (Cd); Chromium (Cr); Lead (Pb); Mercury (Hg); Nickel (Ni); Aluminium (Al); Copper(CU); Gallium (Ga); Iron(Fe); Manganese (Mn); Selenium (Se); Strontium (St); Thorium (Th); Molybdenum (Mo); Zinc (Zn)

mg/kg dry wt

EPA (2005) Standard Operating procedures. Seastars were collected from transects and from a control site at Robb Jetty in Owen Anchorage.

ICP-MS/AES, ICP-AES low level analysis for Mercury and Selenium, some analytes required separate digestion.

_ 0.01 to 0.2 mg/kg

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OTHER MONITORING PROGRAMS – Data collected pre 2006-2007

Toxicants in Sediments Survey Monitoring Program

Custodian Cockburn Sound Management Council Objective To gather information on contaminant types in sediments to allow reporting

against the environmental quality criteria set for the maintenance of ecosystem integrity in high and moderate ecological protection areas. This survey follows previous sampling and analysis of sediments undertaken by the Department of Environmental Protection as part of the Southern Metropolitan Coastal Waters Study 1991-1994 (SMCWS). As part of this study, an initial survey was conducted in November 1991 and was followed by further sampling in February 1994 in areas of highest contamination in the 1991 survey. In 1999, the Kwinana Industries Council (KIC) commissioned D.A Lord & Associates Pty Ltd (DAL) to coordinate a survey of contaminant levels in a broad range of sediment types in Perth’s coastal and estuarine waters.

Sampling Fieldwork: Marine and Freshwater Laboratory (MAFRL) Site locations (Datum: GDA 94):

Site number Site name Area Zone Easting Northing Commenced

OA1 Owen Anchorage N/A 50H 375836 6448785 (SMCWS, 1995)

OA2 East of Shipping Channel, Owen Anchorage

N/A 50H 378117 6446866 2004

OA3 South Carnac, Owen Anchorage

N/A 50H 374151 6443307 2004

OA9 Coogee Beach, Owen Anchorage

N/A 50H 383210 6446474 2004

OA11 Catherine Point, Owen Anchorage

N/A 50H 382779 6448030 2004

1310 Cockburn Cement, Owen Anchorage

N/A 50H 382165 6444647 (SMCWS, 1995)

1530 Jervoise Bay Marina, Cockburn Sound

Moderate Protection 50H 383556 6442871 (SMCWS, 1995)

SH Southern Harbour, Cockburn Sound

Moderate Protection 50H 383334 6441409 2006

JBH Jervoise Bay, Cockburn Sound

High Protection 50H 381830 6442256 2006

3000 Cockburn Sound, north basin

High Protection 50H 378828 6438824 (SMCWS, 1995)

3210 Alcoa Jetty, Cockburn Sound

Moderate Protection 50H 384334 6438093 (SMCWS, 1995)

4000 Cockburn Sound, central basin

High Protection 50H 379655 6434861 (SMCWS, 1995)

4010 James Pt, Cockburn Sound

Moderate Protection 50H 382420 6434506 (SMCWS, 1995)

4500 Cockburn Sound, off CBH jetty

High Protection 50H 381759 6432262 (SMCWS, 1995)

KBJ Kwinana Bulk Jetty, Cockburn Sound

Moderate Protection 50H 382495 6432259 2006

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4800 Cockburn Sound, southern basin

High Protection 50H 380440 6430897 (SMCWS, 1995)

5020 Mangles Bay, Cockburn Sound

High Protection 50H 378226 6428801 (SMCWS, 1995)

C430 Careening Bay, Cockburn Sound

Moderate Protection 50H 376472 6433284 (SMCWS, 1995)

OCB Outside Careening Bay, Cockburn Sound

High Protection 50H 377668 6433067 2006

WS12 Warnbro Sound shallows Reference Site 50H 380419 6424429 (SMCWS, 1995)

WS27 Warnbro Sound basin Reference Site 50H 378637 6421922 (SMCWS, 1995)

Site Location Map (see over):

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Map 16: Sampling sites for the Toxicants in Sediments Survey.

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Frequency

Program Survey dates

Toxicants & Sediments Every 3-5 years. Most recently carried out in April 2006. See ‘Characteristics of Sediments in Perth’s Nearshore Coastal Waters’ for previous sample dates.

Parameters and methods Samples for laboratory analysis: National Measurement Institute (NMI) Parameter Units

Sampling

Laboratory Analysis Method Accuracy Limit of Reporting

Water (H20) content

% Sediment samples were collected using a polycarbonate coring device. Cores were taken at each of the four corners and in the centre of a 1m grid. Once at the water surface, the top 2cm of sediment is placed into an appropriate sample container for subsequent sieving and homogenising by the analytical laboratory. Samples were stored on ice or refrigerated.

Oven drying at 105C for 12 hours 1% 0.1%

Metals and Metalloids

Antimony (Sb); Arsenic (As); Cadmium (Cd); Chromium (Cr); Lead (Pb); Mercury (Hg); Nickel (Ni); Silver (Ag); Zinc (Zn)

mg/kg dry wt

Methods as above. Samples were collected using pre-cleaned polycarbonate jars.

USEPA200.8; 3050 and 6010/6020 Digestion by HNO3+HCl over steambath and determination of metals by ICPMS and ICPAES

Recovery 80-110% and MU +/- 12-20% at>5 x LOR

All 0.5mg/kg dry wt Except Hg 0.2mg/kg dry wt

Organometallics

Tributyltin (TBT)

µg Sn/kg dry wt

Method as above. Samples were collected using amber glass jars with Teflon lined cap.

Confidential: In-house based on: Attar, K.M., “Analytical Methods for the Speciation of Organotins in the Environment”, Applied Organometallic Chemistry, 10, 317-337 (1996). Abalos, M., Bayona,J., Compano, R., Grandos, M., Leal, C., Prat, M., “ Analytical Procedures for the determination of organotin compounds in sediment and Biota: a critical review”, Journal of Chromatography A, 788, 1-49 (1997).

Recovery 50-150% MU +/- 25% at 10x LOR

0.5 µg/Sn/kg dry wt

Organics

Total Polycyclic Aromatic Hydrocarbons (PAHs)

µg/kg dry wt

Methods as above. Samples were collected using amber glass jars with Teflon lined cap.

See below against individual PAHs Recovery 50 - 150% MU +/- 15% at 10x LOR

200µg/kg dry wt

Total Organic Carbon

mg/kg Methods as above. Samples were collected using amber glass jars with Teflon lined cap.

APHA5310B Crushed sample weighed into small platinum boat and hydrochloric acid is added to remove inorganic carbon, residue heated 100 C to dryness. Put into Dohrmann 190 TOC analyser, heated to 680C to convert all organic carbon to carbon dioxide. Concentration is determined by an infra-red detector and TOC calculated.

MU estimated ~20% at >5 x LOR

100mg/kg

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Acenaphthene; Acenaphthalene; Anthracene; Fluorene; Naphthalene; Phenanthrene; Low Molecular Weight PAHs; Benzo(a)anthracene; Benzo(a)pyrene; Dibenzo(a,h)anthracene; Chrysene; Fluoranthene; Pyrene;

µg/kg dry wt

Methods as above. Samples were collected using amber glass jars with Teflon lined cap.

For PAHs USEPA 3540 (for sample prep) and detection is based on USEPA 8270. Sediment mixed with anhydrous sodium sulphate. The dried sample extracted with dichloromethane/acetone solvent (1:1). A portion of the extract is con-centrated and cleaned up with silica gel. The final cleaned extract is con-centrated and analysed by GC-MS in SIM mode

Recovery 50 - 150% MU +/- 15% at 10x LOR

10µg/kg dry wt

Total PCBs Total DDT; p.p’-DDE; Chlordane; Dieldrin; Endrin; Lindane

µg/kg dry wt

Methods as above. Samples were collected using amber glass jars with Teflon lined cap.

1µg/kg dry wt

o.p-+p.p’-DDD µg/kg dry wt

Methods as above. Samples were collected using amber glass jars with Teflon lined cap.

PCB and OC residues (DDT etc) USEPA 3550 (for sample prep) and detection is based on USEPA 8081. Sediment matrices are mixed with anhydrous sodium sulphate and tumbled with hexane / acetone using rotating shaker. Extracts are then concentrated then cleaned up with floristic. If required, the extract is cleaned up by Gel Permeation Chromatography (GPC) and/or sulphur removal. The final extract is analysed by GC-ECD and confirmed by GCMS-NC

Recovery 50 - 150% MU +/- 20% at 10x LOR

2µg/kg dry wt

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Background Water Quality Monitoring Program for Perth Metropolitan Waters

Custodian Department of Environment and Conservation, Marine Ecosystems Branch Objective Characterise natural background concentration for a range of chemical

constituents in Perth metropolitan coastal waters and ambient concentrations in Cockburn Sound. Also, to ascertain whether the guideline trigger values in ANZECC & ARMCANZ (2000) were relevant to the region (DoE Technical Series 117, March 2005).

Sampling Fieldwork: DoE, Marine Branch and CSIRO Centre for Advanced Analytical Chemistry

(Sydney) Site Locations: Site number Site name Area Zone Easting Northing Commenced

WS 4 Warnbro Sound Site 4 N/A 50H 379740.8491 6421510.5301 09/04/03

WS 6 Warnbro Sound Site 6 N/A 50H 381283.9446 6419699.7106 09/04/03

OS Offshore site N/A 50H 366263.1099 6422745.1779 09/04/03

CS 8 Cockburn Sound Site 8 High Protection 50H 379336.9538 6436954.2425 09/04/03

CS MB Cockburn Sound Mangles Bay

High Protection 50H 378696.5479 6428775.1350 09/04/03

CS 4 Cockburn Sound Site 4 High Protection 50H 376828.2140 6441691.6614 09/04/03

CS 6A Cockburn Sound Site 6A Moderate Protection 50H 382743.6555 6442648.6897 09/04/03

CS 7 Cockburn Sound Site 7 Moderate Protection 50H 383324.5857 6439975.9582 09/04/03

CS 9 Cockburn Sound Site 9 Moderate Protection 50H 383091.8039 6435630.8712 09/04/03

CS 9A Cockburn Sound Site 9A Moderate Protection 50H 382360.0806 6432351.6515 09/04/03

TR Trigg Island N/A 50H 379406.2431 6472341.3554 09/04/03

QR Quinns Rock N/A 50H 374597.1850 6491778.0472 09/04/03

Site Location Map (see over):

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Map 17: Sampling sites for the Background Water Quality Monitoring Program for Perth Metropolitan Waters.

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Frequency

Program Survey dates

Pilot Program. Once off on 27th February 2003. Sites WS4, Offshore site and CS8.

Toxicants in water. Once off over 9th to 10th April 2003. Metals were measured at all sites, but only 10 of the 12 sites were analysed for organic chemicals (CS7: CS9 surface and bottom; and WS4: WS6A: CS8: CS4: CSMB, CS9A: CS6A and TR at surface only).

CSMC 2002 workshop identified that toxicants in water should be monitored every 3 to 5 years.

Parameters and methods In situ:

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Salinity in situ –meter deployed through water column from surface at sites WS4; OS and CS

- - -

Temperature oC in situ – meter deployed through water column from surface at sites WS4; OS and CS

- ± 0.15 oC -

Samples for laboratory analysis: CSIRO Center for Advanced Analytical Chemistry (Sydney)

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Aluminium ug/l Sample for all metals at the surface (1.0m below the surface) using the DoE Teflon-coated Niskin bottle.

Bottom samples (1.0m above substrate) for all metals taken at WS6 and CS7 and CS9 using the Teflon-coated Niskin bottle.

See DoE report Technical Series.117 pg28-30 2005.

- 1ug/l

Arsenic ug/l “ “ - 0.2ug/l

Cadmium ug/l “ “ - 0.002ug/l

Chromium ug/l “ “ - 0.15 µg/l

Cobalt µg/l “ “ - 0.008ug/l

Copper ug/l “ “ - 0.011ug/l

Lead ug/l “ “ - 0.019ug/l

Mercury ug/l “

Bottom Hg sample also taken at CS9A.

“ - 0.0002ug/l

Silver ug/l “ “ - 0.4ug/l

Zinc ug/l “ “ - 0.018ug/l

Samples for laboratory analysis: AGAL

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Organochlorines (pesticides)

µg/l Surface samples for OC, OP and other organic analyses taken at all sites except offshore and Quinns Rock sites. Bottom samples also taken at CS7 and CS9.

Method NR_19 - 0.01µg/l

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Organophosphates (pesticides)

µg/l “ Method NR_19 - 0.01µg/l

Polyaromatic Hydrocarbons

µg/l “ Method 11.11 - 0.1µg/l

Chlorinated Phenols

µg/l “ Method 11.22 - 0.2µg/l

Phenol µg/l “ Method 11.22 - 0.1µg/l

BTEX µg/l “ Method WL244 - 1µg/l to 5µg/l

Total Petroleum Hydrocarbons

µg/l “ Method WL 244 and WL 203 - 25µg/l to 250µg/l

Other Organics

µg/l “ Method NGCMS_1111 & NGCMS_1122

- 1µg/l

Samples for laboratory analysis: Western Radiation Services

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Radionucleides Bq/L Surface samples taken for radionucleides (gross alpha and beta) at WS4, and WS6, CS8, CS9, CS9A and QR.

Method LTP6 Alpha/Beta – by evaporation and gas proportional counting. The Beta results were corrected for potassium-40 concentrations.

- Alpha = 0.01Bq/l

Beta = 0.01 Bq/l

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Characteristics of Sediment in Perth’s Nearshore Coastal Waters

Custodian Kwinana Industries Council Objective Gather data on contaminant levels in a broad range of sediment types. Sampling Fieldwork: D.A.Lord & Associates Pty Ltd (now Oceanica) and MAFRL Site Locations:

Site number Site name Area Zone Easting Northing Commenced

0401 Owen Anchorage N/A 50H 375698 6448636 (SMCWS, 1995)

1310 Owen Anchorage N/A 50H 382027 6444498 (SMCWS, 1995)

1530 Jervoise Bay Marina Moderate Protection 50H 383418 6442722 (SMCWS, 1995)

3000 Cockburn Sound, north basin

High Protection 50H 378690 6438675 (SMCWS, 1995)

3210 Alcoa Jetty, Cockburn Sound

Moderate Protection 50H 384196 6437944 (SMCWS, 1995)

4000 Cockburn Sound, central basin

High Protection 50H 379517 6434712 (SMCWS, 1995)

4010 James Pt, Cockburn Sound

Moderate Protection 50H 382282 6434357 (SMCWS, 1995)

4500 Cockburn Sound, off CBH jetty

Moderate Protection 50H 381621 6432113 (SMCWS, 1995)

4800 Cockburn Sound, southern basin

High Protection 50H 380302 6430748 (SMCWS, 1995)

5020 Mangles Bay, Cockburn Sound

High Protection 50H 378088 6428652 (SMCWS, 1995)

C430 Careening Bay, Cockburn Sound

Moderate Protection 50H 376334 6433135 (SMCWS, 1995)

WS12 Warnbro Sound shallows

N/A 50H 380419 6424429 (SMCWS, 1995)

WS27 Warnbro Sound basin N/A 50H Lat 115 42.63

Long 32 19.98

(SMCWS, 1995)

Site Location Map (see over):

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Map 18: Sampling sites for the Characteristics of Sediment in Perth’s Nearshore Coastal Waters Monitoring Program.

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Frequency

Program Survey dates

Sediment Program Once off in 1991 and 1994 (EPA: SMCWS, 1995). Once off by KIC in 1999.

CSMC 2002 workshop identified that sediments, particularly in the broader high protection area, should be monitored every 3 to 5 years.

Parameters and methods Samples for laboratory analysis: AGAL, NATA registered laboratory.

Parameter Units Sampling Laboratory Analysis Method

Accuracy Limit of Reporting

Water (H20) content

All sampling equipment was thoroughly washed with clean site water before and after taking samples at each site. Sediment samples were collected using a polycarbonate coring device. Cores were taken at each of the four corners and in the centre of a 1m grid. The coring device was inserted to approx 10cm, capped and withdrawn. On board the cores were extruded and the top 2cm cut off. The top 2cm from each core was combined in a container, thoroughly mixed and subsampled for analysis of metals and PAHs. Samples were then placed in glass containers; any water above the sample was decanted off. Samples were stored on ice or refrigerated.

Refer DALSE report.

- 0.1%

Total Organic Carbon

As above. TOC analysed using a Lego carbon analyser with detection by infra-red, according to USEPA method 9060. Samples area pre-treated with acid prior to determination in order to remove carbonates.

- 0.1-0.2%

Loss on ignition As above. At approx 550 to 1040 degrees Celsius.

- 1.0%

Major Ions:

Calcium (Ca) Magnesium (Mg) Lithium (Li) Sulphur (S)

As above. Refer DALSE report.

-

Heavy Metals:

Silver (Ag); aluminium (Al); arsenic (As); cadmium (Cd); chromium (Cr); copper (Cu); iron (Fe); mercury (Hg); manganese (Mn); nickel (Ni); lead (Pb); selenium (Se); vanadium (V) and zinc (Zn)

As above. USEAP Method 200.8 - analysed after strong acid extraction of DRY sediment.

Ag, As, Cd, Cr, Cu, Hg, Mn, Ni, Pb, Se, V and Zn after extraction of WET sediment by stirring with 1M HCl for one hour.

- *ug/g dry wt

Al (100); As (0.5); Cd (0.1); Cr (0.5); Cu (0.5); Fe (50); Pb (1.0); Hg (0.1); Mn (1.0); Ni (0.5); Se (0.5); Ag (0.1); V (2.0); Zn (0.5);

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Total Polycyclic Aromatic Hydrocarbons (PAHs)

As above. Analysed after solvent extraction of WET samples.

- 0.15

Samples for laboratory analysis: CSIRO Minerals Particle Analysis Service

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Particle size All sampling equipment was thoroughly washed with clean site water before and after taking of samples at each site. At each site approx 1kg of surficial sediment (the top 2cm) was collected using a stainless steel scoop, and placed in a clean plastic screw top container. Samples were stored on ice or refrigerated.

Analysis down to the clay fraction (defined as particle size less than 2 microns). Wet sieving was used for the fractions down to 212u, and laser diffraction for analysis of the fines.

- 0.1%

Samples for laboratory analysis: CSIRO Centre for Advanced Analytical Chemistry

Parameter Units Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Tributyltin (TBT) Samples were collected using pre-cleaned polycarbonate vials (4.2 x 10cm) with polypropylene screw caps. Cores were taken at each of the four corners and in the centre of a 1m grid by pressing the vial into the sediment leaving a 2cm gap at the top of the vial. Samples were stored on ice or refrigerated

Refer DALSE report. - 1 ng/g dry wt

AVS/SEM

(Acid Volatile Sulphur / Simultaneously Extracted Metals)

Great care was taken to ensure samples were kept in a reducing atmosphere, as any contact with oxygen would oxidise the AVS. On board the AVS/SEM samples were placed inside a custom-built perspex box continuously flushed with industrial grade argon gas. Samples were packed in dry ice and sent for analysis.

Refer DALSE report. -

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Seagrass Mapping and Distribution in Cockburn Sound

Custodian Cockburn Sound Management Council

Objective To map the distribution of seagrass meadows in Cockburn Sound for comparison

against historical mapping to show extent of meadows and any incremental loss or gain.

Sampling Fieldwork: D.A. Lord Science and Engineering (now known as Oceanica). Site Locations: Mapping is undertaken throughout vegetated areas of Cockburn Sound using

aerial photography. In 2004 a Ground-truthing Study was undertaken to more accurately map benthic habitats on the eastern foreshore of Cockburn Sound.

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Map 19: Historic Sequence of Seagrass Distribution in Cockburn Sound 1967-1999.

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Map 19a: Distribution of Habitat Types within the Eastern Shelf of Cockburn Sound.

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Frequency

Program Survey dates

Seagrass Mapping Regular surveys undertaken of seagrass meadows in Cockburn Sound showing distribution were undertaken in 1967, 1972, 1981, 1999, 2002 and 2004 (Eastern foreshore only).

The CSMC has identified that seagrass mapping should be undertaken every three to four years.

Parameters and methods In situ:

Parameter Units Sampling Analysis Method Accuracy Limit of Reporting

Seagrass habitat mapping

m2 Visual examination of aerial imagery.

Sidescan sonar (SSS) survey (2004 only).

Towed underwater video to provide groundtruth data and assist in interpretation of the SSS data (2004 only).

Spot dives in selected areas which were identified as having high habitat complexity (2004 only).

Undertaken by consultancy. Refer consultants report.

1:5,000

200m2

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Survey of Metal Body Burden in Edible Fish Species in Perth’s Coastal Waters

Custodian Department of Environment and Conservation – Marine Ecosystems Branch

Objective To establish the background levels of selected heavy metals in the edible

portion of the flesh of a range of recreational and commercially important fin-fish in the coastal waters off Perth, WA.

Sampling Fieldwork: Department of Environment – Marine Ecosystems Branch.

This is a once-off program that is still in progress. The sites north of Cockburn Sound were sampled March - June 2005.

Sample area: A series of sites have been located over sandy substrates along approximately

9 offshore transects between Ocean Reef and Becher Point, including one in Owen Anchorage, two in Cockburn Sound and one in Warnbro Sound. The sites have been located to represent inshore (<200m offshore), lagoonal (200 – 3000m offshore) or offshore (3000 – 8000m offshore) environments. Two sites have also been established in the mid-shelf north and south of Rottnest Island.

Site locations: Indicative site locations shown in site location map. Site Location Map (see over):

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Map 20: Notional survey plan for metal body burden in fish (sketch only and not to scale). Frequency

Program Survey dates

Metal survey in edible fish species

Once off study first undertaken in 2005

Parameters and methods Sampling was targeted for the collection of Sillago sp (Whiting) using lines and baited hooks. Sillago are selected because of their ubiquitous nature, they are commonly targeted by recreational anglers and their diet includes filter-feeding invertebrates such as polychaete worms which inhabit sediments where heavy metals can accumulate. Other fish species were opportunistically sampled in order to obtain samples of species higher up the food chain.

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Samples for laboratory analysis: Chemistry Centre

Parameter Units*

Sampling Laboratory Analysis Method Accuracy Limit of Reporting

Aluminium mg/kg Flesh samples from the edible portions of fish were stored in plastic bags on ice in the field and stored frozen until analysed. Approximately 10 - 20 g of muscle tissue is required for each sample. Five replicate samples were collected from each site wherever possible.

Scaled, unskinned fish fillets.

ICPMS - 0.05

Total arsenic mg/kg “ ICPMS - 0.1

Cadmium mg/kg “ ICPMS - 0.001

Total chromium mg/kg “ ICPMS - 0.05

Copper mg/kg “ ICPMS - 0.05

Lead mg/kg “ ICPMS - 0.01

Manganese mg/kg “ ICPMS - 0.01

Total mercury mg/kg “ ICPMS - 0.005

Selenium mg/kg “ ICPMS - 0.5

Zinc mg/kg “ ICPMS - 0.05

* metal concentrations are mg/kg wet weight.

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DATA MANAGEMENT A data management system is necessary to ensure Environmental Quality Monitoring Program data is stored in a single location, consistent format and with appropriate quality assurance. The CSMC is in the process of investigating a means for coordinating the collation and consolidation of all Cockburn Sound monitoring data into a single database. A contractor will be employed for this purpose. Once this occurs it is proposed that stakeholders, resource managers and the community can access Cockburn Sound monitoring data stored on a single database.

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REPORTING

Report Cards

The Cockburn Sound Report Cards have been developed to provide information on the health of the Cockburn Sound marine environment to stakeholders and the community. As part of the State Environmental (Cockburn Sound) Policy 2005 the Cockburn Sound Management Council is also required to prepare an annual Report on the state of Cockburn Sound. This Report is submitted to the Minister for the Environment and tabled in parliament. A report card for each environmental value in Cockburn Sound has been prepared every year since 2001. Report card maps are also prepared which show site specific information for individual indicators. The Report Cards are available on the Cockburn Sound Management Council website: http://csmc.environment.wa.gov.au/. Benchmarks, known as Environmental Quality Criteria under the State Environmental (Cockburn Sound) Policy have been developed for Cockburn Sound and can be used to determine whether the Environmental Values for Cockburn Sound are being protected. The five environmental values for Cockburn Sound are:

• Ecosystem Health

• Seafood safe for eating

• Aquaculture

• Recreation and aesthetics

• Industrial water supply.

The Cockburn Sound report cards are derived by comparing monitoring data, undertaken by a variety of stakeholders, with the environmental quality criteria following the process defined in the Environmental Quality Criteria Reference Document.

Web Reporting System

The Cockburn Sound Management Council has developed a web reporting system that builds on the existing annual report cards and uses report card maps to indicate specific locations of concern and areas requiring additional monitoring effort. The report card maps for ecosystem health combine the reporting of the high and moderate protection areas. The web reporting system aims to provide clear and jargon-free information on monitoring activities and results to stakeholders and the community. The report card maps have been developed for the main concerns to ecosystem health being:

• tributyltin (TBT) concentrations in the sediments in Jervoise Bay and Careening Bay;

• seagrass health in Mangles Bay and Kwinana; and

• phytoplankton biomass along the eastern foreshore and within Mangles Bay.

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Appendix 1: Contact Details

AGAL (Now National Measurement Institute NMI)

Australian Government Analytical Laboratories (AGAL) National Measurement Institute 3 Clive Road, Cottesloe WA 6011 PO Box 83 Cottesloe WA 6011 Tel: (08) 9384 1511 Fax: (08) 9384 1132 Website: www.measurement.gov.au

Alcoa of Australia, Ltd Alcoa World Alumina Australia Cnr Davy and Marmion Streets Booragoon, Western Australia PO Box 252, Applecross WA 6953 Tel: (61 8) 9316 5111 Fax: (61 8) 9316 5228 Website: www.alcoa.com

Cawthron Institute 98 Halifax Street East, Nelson, New Zealand Private Bag 2 Nelson Tel: (0011 64 3) 548 2839 Toll Free: 0800 50 2525 Website: www.cawthron.org.nz e-mail: [email protected]

Chemistry Centre WA

125 Hay Street East Perth WA 6004 Tel: (08) 9222 3177 Fax: (08) 9325 7767 Toll Free: 1800 666 322 Emergency/After Hours: 1300 665 500 Website: www.ccwa.wa.gov.au e-mail: [email protected]

Cockburn Sound Management Council Shop 1/15 Railway Terrace, Rockingham Beach PO Box 5161, Rockingham Beach WA 6969 Tel: (08) 9591 3837 Fax: (08) 9528 5387 Website: http://csmc.environment.wa.gov.au e-mail: [email protected]

CSIRO, Land and Water Private Bag No.5 Wembley WA 6913 Tel: 9333 6000 Fax: 9333 6211 Website: www.clw.csiro.au

CSIRO, Minerals

Minerals Particle Analysis Services Center for Advanced Analytical Chemistry

Conlon Street, Waterford WA PO Box 90 Bentley WA 6982 Tel: (08) 9334 8000 Fax: (08) 9334 8001 New Illawarra Road, Lucus Heights NSW Private Mail Bag 5, Menai NSW 2234 Tel: (02) 9710 6766 Fax: (02) 9710 6789 Website: www.minerals.csiro.au e-mail: [email protected]

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Department of Environment and Conservation , Marine Ecosystems Branch

Ray Masini, Manager Marine Management and Protection PO Box K822 Perth Western Australia 6842 Tel: (08) 9222 7046 Fax: (08) 9321 5184 Website: www.environment.wa.gov.au e-mail: [email protected]

Department of Water, Phytoplankton Ecology Unit (PEU)

Wasele (Vas) Hosja, Manager Phytoplankton Ecology Unit, Swan Region 7 Ellam St Vic Park WA 6100 Tel: (08) 6250 8060 Fax: (08) 6250 8077 Mobile: 0417 997 379 Website: www.environment.wa.gov.au e-mail: [email protected]

Department of Defence Jacqueline Nichol, Environmental Officer, Department of Defence B 104 HMAS Stirling, Rockingham WA 6958 Tel: (08) 9553 2289 Fax: (08) 9553 3439 Website: www.defence.gov.au e-mail: [email protected]

Defence Science & Technology Organisation

Aeronautical & Maritime Research Laboratory General Enquiries 506 Lorimer St Fishermans Bend VIC 3207 Tel: (03) 9626 7000 Website: www.defence.gov.au

Edith Cowan University Professor Paul Lavery, School of Natural Sciences Edith Cowan University, 100 Joondalup Dve, JOONDALUP WA 6027 Tel: 9400 5687 Fax 9400 5762 Website: www.ecu.edu.au e-mail: [email protected]

Environmental Services (SGS) 52 Murray Road, Welshpool WA 6106 Tel: (08) 9458 7278 Fax: (08) 9451 3505 Suite 1, Enterprise Unit 3, de Laeter Way, Technology Park, Bentley WA 6102 Locked Bag 10, Bentley Delivery Center WA 6983 Tel: (08) 9473 8100 Fax: (08) 9472 5556 Website: www.au.sgs.com/environment

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Fremantle Ports

Emma McCauley, Port Environmental Advisor Fremantle Ports PO Box 95 Fremantle, Western Australia 6959 Tel: (08) 9430 3327 Fax: (08) 9430 3450 Website: www.fremantleport.com.au e-mail: [email protected]

Geotechnical Services Suite 6 Admiralty Towers 35 Howard Street, Brisbane Queensland 4001 Tel: (07) 3832 9700 Fax: (07) 3403 0691

Health Department

Bree Abbott, Scientific Officer Applied Environmental Health Branch Department of Health PO Box 8172, Perth Bussiness Centre, Perth WA 6849 Tel: (08) 9388 4963 Fax: (08) 0388 4905 e-mail: [email protected]

Kwinana Industries Council

Chris Oughton, Director Kwinana Industries Council, PO Box 2195, Rockingham WA 6967. Tel: (08) 94370161 Mob: 0407753610 Website: www.kic.org.au E-mail: [email protected]

LandCorp

John Yates, Business Manager, Landcorp, Level 3 Westfarmers House, 40 The Esplanade Perth WA 6000 Tel: (08) 9482 7459 Website: www.landcorp.com.au e-mail: [email protected]

MPL Health Safety Environment

Dr Neil North PO Box 4223, Burswood WA 6979 Tel: (08) 9355 7100 Fax: (08) 9355 7111 Website: www.mpl.com.au e-mail: [email protected]

Marine and Freshwater Research Laboratories, Murdoch University

Celeste Wilson, Manager MAFRL Murdoch University, South Street Perth WA 6150 Tel: (08) 9360 6907 Fax: (08) 9360 6613 Website: www.murdoch.edu.au e-mail: [email protected]

National Measurement Institute (NMI)

National Measurement Institute Australian Government Analytical Laboratories (AGAL) 3 Clive Road, Cottesloe WA 6011 PO Box 83 Cottesloe WA 6011 Tel: (08) 9384 1511 Fax: (08) 9384 1132 Website: www.measurement.gov.au

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PathCentre

QE II Medical Centre Ground Floor, K Block Hospital Avenue, Nedlands WA 6909 Tel: (08) 9346 2583 – waters Tel: (08) 9346 2167 - foods Fax: (08) 9381 7139 Website: www.pathcentre.com.au

Water Corporation

Mr Gordon Groth, Environmental Branch, Water Corporation, PO Box 100 Leederville WA 6902. Tel: (08) 9420 2796 E-mail: [email protected] Website: www.watercorporation.com.au

W.A. Museum Perth Cultural Center, James Street Perth WA 6000 Tel: (08) 9427 2700 Fax: (08) 9427 2882 Website: www.museum.wa.gov.au

W.A. Mussel Producers Association

C/- ACWA, PO Box 55 Mt Hawthorn WA 6016 Tel: (08) 9492 8888 Website: www.wafic.org.au e-mail: [email protected]

Western Radiation Services Unit 15/ 88 Briggs Street, Welshpool WA 6106 Tel: (08) 9470 3000 Fax: (08) 9470 3001 Website: www.westernradiation.com.au

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Appendix 2: Acronyms

ACWA Aquaculture Council of Western Australia

ANZECC Australian and New Zealand Environment and Conservation Council

CSMC Cockburn Sound Management Council

CSIRO Commonwealth Scientific and Industrial Research Organisation

DoD Department of Defence

DoE Department of Environment

DEC Department of Environment and Conservation

DoF Department of Fisheries

DoH Department of Health Western Australia

DoIR Department of Industry and Resources

DoW Department of Water

EMP Environmental Management Plan for Cockburn Sound and its Catchment 2005

EQC Environmental Quality Criteria Reference Document for Cockburn Sound (2003-2004)

EQMP Environmental Quality Monitoring Program

FP Fremantle Ports

KIC Kwinana Industries Council

LandCorp Western Australian Land Authority

LOR Limit of Reporting

MAFRL Marine and Freshwater Research Laboratory, Murdoch University

SEP State Environmental (Cockburn Sound) Policy 2005

SOP Manual of Standard Operating Procedures for environmental monitoring against the Cockburn Sound environmental quality criteria (2003-2004)

WAFIC Western Australian Fishing Industries Council

WAMPA Western Australian Mussel Producers Association

WC Water Corporation

WIN Water Information Network database (within the Department of Environment)

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REFERENCES Environmental Management Plan for Cockburn Sound and its Catchment, Department of Environment, Perth, 2005. Environmental Quality Criteria Reference Document (Cockburn Sound), Environmental Protection Authority, Perth, 2005. State Environmental (Cockburn Sound) Policy 2005, Environmental Protection Authority, Perth, 2005. Cockburn Sound Management Council website, http://csmc.environment.wa.gov.au/ Department of Environment and Conservation, Perth, 2007. Standard Operating Procedures for Environmental Monitoring against the Cockburn Sound Environmental Quality Criteria, DALSE, Perth, 2005. A Survey of Selected Seagrass Meadows in the Fremantle – Warnbro Sound Region 2006, Edith Cowan University, 2006 Water Quality of Cockburn and Warnbro Sounds (December 2006 to March 2007), Marine and Freshwater Research Laboratory, 2007 Water Quality of Cockburn Sound (November 1996 to March 1997), Marine and Freshwater Research Laboratory, 1997 Australian Marine Complex – Cockburn Sound, Southern Harbour Summer Monitoring Results December 2004 to March 2005, Oceanica, 2005 Australian Marine Complex – Cockburn Sound, Northern Harbour Summer Monitoring Results December 2004 to March 2005, Oceanica, 2005 Jervoise Bay Marine Monitoring Programme, Water Quality Monitoring Annual Report 2006, Oceanica, 2006 Fremantle Port Authority: Marine Quality Monitoring Program, Draft Annual Report August 2004 – July 2005, Department of Environment, 2005 Characteristics of Sediment in Perth’s Nearshore Coastal Waters, Kwinana Industries Council, DA Lord & Associates Pty Ltd, 2000 ANZECC, 2000. Australian and New Zealand Guidelines for Fresh and Marine Water Quality. Southern Metropolitan Coastal Waters Study (SMCWS) 1991-1994, Department of Environmental Protection, Perth WA. Background quality for coastal marine waters of Perth Western Australia, 2005, Technical Series 117, Department of Environment, Perth Oceanica, 2007, Alcoa Nearshore Survey 2006 Data Report, prepared for Alcoa of Australia Ltd by Oceanica Consulting Pty Ltd, Report No. 551/1.