Delay-Differential Equations. Tools for Epidemics Modelling

62
Delay-Differential Equations. Tools for Epidemics Modelling

Transcript of Delay-Differential Equations. Tools for Epidemics Modelling

Page 1: Delay-Differential Equations. Tools for Epidemics Modelling

Delay-Differential Equations. Tools for

Epidemics Modelling

𝑏𝑦 𝐼𝑔𝑛𝑎𝑠𝑖𝐺𝑟𝑜𝑠

Page 2: Delay-Differential Equations. Tools for Epidemics Modelling

Contents

Delay-Differential Equations

• Differential Equations• Example• Stability• Initial Conditions

• Delay-Differential Equations• Solution• Behaviour of Solutions• Stability

Model Types with Example

• SIR Model• Incubation Period Considered

• With Delay-Differential Equations• By Compartments (SEIR Model)

• Symptoms Considered (SEAIR Model)• Space Spread

Conclusions

Page 3: Delay-Differential Equations. Tools for Epidemics Modelling

Delay-Differential Equations

• Differential Equations• Example• Stability• Initial Conditions

• Delay-Differential Equations• Solution• Behaviour of Solutions• Stability

Page 4: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

The PendulumDifferential Equations

https://en.wikipedia.org/wiki/Rheonomous

Page 5: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

The PendulumDifferential Equations (Stability)

https://en.wikipedia.org/wiki/Rheonomous

Equilibrium Points:• º• º

Page 6: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

The PendulumDifferential Equations (Stability)

https://en.wikipedia.org/wiki/Rheonomous

Equilibrium Points:• º Stable• º Unstable

Page 7: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential Equation:Differential-Delay Equations (Initial Conditions)

Page 8: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential Equation:With one initial value, it’s enough!

Differential-Delay Equations (Initial Conditions)

Page 9: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential Equation:With one initial value, it’s enough!At time ,

Differential-Delay Equations (Initial Conditions)

Page 10: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential Equation:With one initial value, it’s enough!At time , So And the function can be “constructed”

Differential-Delay Equations (Initial Conditions)

Page 11: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:Differential-Delay Equations

Page 12: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:If at , ,

Differential-Delay Equations (Initial Conditions)

Page 13: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:If at , , then

Differential-Delay Equations (Initial Conditions)

Page 14: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:If at , , thenSo we cannot “construct” our function. And if we specify

Differential-Delay Equations (Initial Conditions)

Page 15: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:If at , , thenSo we cannot “construct” our function. And if we specify Still not enough, because we can “construct” just a little and then we don’t know .

Differential-Delay Equations (Initial Conditions)

Page 16: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:If at , , thenSo we cannot “construct” our function. And if we specify Still not enough, because we can “construct” just a little and then we don’t know .We need all values of for between -1 and 0. (Infinite Values)

Differential-Delay Equations (Initial Conditions)

Page 17: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try ,

Differential-Delay Equations (Solution)

Page 18: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try , and we find

Differential-Delay Equations (Solution)

Page 19: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try , and we findHence

Differential-Delay Equations (Solution)

Page 20: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try , and we findHenceWith infinite complex solutions.

Differential-Delay Equations (Solution)

Page 21: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try , and we findHenceWith infinite complex solutions. A solution will be a linear combination, for example:

Differential-Delay Equations (Solution)

Page 22: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:To solve it, we try , and we findHenceWith infinite complex solutions. A solution will be a linear combination, for example:Or

Differential-Delay Equations (Solution)

Page 23: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider one posible solution:

Differential-Delay Equations (Behaviour of Solutions)

Page 24: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.

Differential-Delay Equations (Behaviour of Solutions)

Page 25: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 26: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 27: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 28: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 29: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 30: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,Whereas if and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 31: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,Whereas if and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 32: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation and its Characteristic Equation:Let’s consider an example:And let

.If for example and ,Whereas if and ,

Differential-Delay Equations (Behaviour of Solutions)

Page 33: Delay-Differential Equations. Tools for Epidemics Modelling

Differential-Delay Equations

A Differential-Delay Equation:Let’s consider an example:And let

.If for example and ,Whereas if and ,

Differential-Delay Equations (Stability)

Page 34: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types with Example

• SIR Model• Incubation Period Considered

• With Delay-Differential Equations• By Compartments (SEIR Model)

• Symptoms Considered (SEAIR Model)• Space Spread

Page 35: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

In this model population is divided in 3 classes:SIR Model

Page 36: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

In this model population is divided in 3 classes: Susceptibles: People who are not infected but susceptible of being infected. Infecteds: People infected by the disease who can transmit it. Recovereds: People once infected, but now recovered and not susceptible of becoming infected again.

SIR Model

Page 37: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

In this model population is divided in 3 classes: Susceptibles: People who are not infected but susceptible of being infected. Infecteds: People infected by the disease who can transmit it. Recovereds: People once infected, but now recovered and not susceptible of becoming infected again.The Model is described by the following system:

SIR Model

Page 38: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

In this model population is divided in 3 classes: Susceptibles: People who are not infected but susceptible of being infected. Infecteds: People infected by the disease who can transmit it. Recovereds: People once infected, but now recovered and not susceptible of becoming infected again.The Model is described by the following system:for some , which are called the contagion and recovery parameters, respectively.

SIR Model

Susceptibles Infecteds

Recovereds

Page 39: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. SIR Model with Incubation Period

Page 40: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .

SIR Model with Incubation Period

Page 41: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .At the same time, we consider that in the incubation period they cannot recover.

SIR Model with Incubation Period

Page 42: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .At the same time, we consider that in the incubation period they cannot recover.The SIR Model was:for some .

SIR Model with Incubation Period

Page 43: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .At the same time, we consider that in the incubation period they cannot recover.SIR when adding infectiousness delayed:for some .

SIR Model with Incubation Period

Page 44: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .At the same time, we consider that in the incubation period they cannot recover.SIR when adding recovery delayed:for some .

SIR Model with Incubation Period

Page 45: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

This time we consider that the infected individuals don’t become infectious until a time of seconds passes. Therefore the infectious individuals are those infecteds seconds before, minus the ones that have recovered in this period. To substract these, we add a factor of .At the same time, we consider that in the incubation period they cannot recover.SIR Model with Incubation Period Considered:for some .

SIR Model with Incubation Period

Page 46: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

We consider again incubation period but by just introducing a new class: The Exposed. SEIR Model

Page 47: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

We consider again incubation period but by just introducing a new class: The Exposed. They are infected but not infectious, and they canot recover.

SEIR Model

Page 48: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

We consider again incubation period but by just introducing a new class: The Exposed. They are infected but not infectious, and they canot recover.SIR Model was:for some

SEIR Model

Susceptibles Infecteds

Recovereds

Page 49: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

We consider again incubation period but by just introducing a new class: The Exposed. They are infected but not infectious, and they canot recover.The Model consists on the following system:for some

SEIR Model

Susceptibles

Exposed

Infected

Recovered

Page 50: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Now, following our last model, for some

SEAIR Model

Susceptibles

Exposed

Infected

Recovered

Page 51: Delay-Differential Equations. Tools for Epidemics Modelling

Susceptibles

Exposed

Asymptomatic

Infected

Recovered

Model Types

Now, following our last model, we introduce the class of the Asymptomatics.for some

SEAIR Model

Page 52: Delay-Differential Equations. Tools for Epidemics Modelling

Susceptibles

Exposed

Asymptomatic

Infected

Recovered

Model Types

Following our last model, we introduce the class of the Asymptomatics. They are infectious but with a different rate of contagion because they don’t have symptoms.The Model consists on the following system:for some

SEAIR Model

Page 53: Delay-Differential Equations. Tools for Epidemics Modelling

Susceptibles

Exposed

Asymptomatic

Infected

Recovered

Model Types

Following our last model, we introduce the class of the Asymptomatics. They are infectious but with a different rate of contagion because they don’t have symptoms. And they recover at a different rate, as their infection is unknown.The Model consists on the following system:for some

SEAIR Model

Page 54: Delay-Differential Equations. Tools for Epidemics Modelling

Susceptibles

Exposed

Asymptomatic

Infected

Recovered

Model Types

Following our last model, we introduce the class of the Asymptomatics. They are infectious but with a different rate of contagion because they don’t have symptoms. And they recover at a different rate, as their infection is unknown. There’s probability of getting symptoms.The Model consists on the following system:for some

SEAIR Model

Page 55: Delay-Differential Equations. Tools for Epidemics Modelling

Susceptibles

Exposed

Asymptomatic

Infected

Recovered

Model Types

Following our last model, we introduce the class of the Asymptomatics. They are infectious but with a different rate of contagion because they don’t have symptoms. And they recover at a different rate, as their infection is unknown. There’s probability of getting symptoms. And we define as the rate at which asymptomatic develop symptoms.The Model consists on the following system:for some

SEAIR Model

Page 56: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor.Space Spread

Page 57: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places.Space Spread

Page 58: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places. And a disease (Let’s say Ebola).Space Spread

Page 59: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places. And a disease (Let’s say Ebola).Space Spread

Barcelona Sierra Leone

Page 60: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places. And a disease (Let’s say Ebola).We have travel between both places and disease is spread from place 1 to place 2, and viceversa.

Space Spread

Barcelona Sierra Leone

Page 61: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places. And a disease (Let’s say Ebola).We have travel between both places and disease is spread from place 1 to place 2, and viceversa. Disease is spread inside the planes (or the cars, or the trains, etc.) as well.

Space Spread

Barcelona Sierra Leone

Page 62: Delay-Differential Equations. Tools for Epidemics Modelling

Model Types

Our last model is the simplest model that considers space as a factor. We have 2 places. And a disease (Let’s say Ebola).We have travel between both places and disease is spread from place 1 to place 2, and vice-versa. Disease is spread inside the planes (or the cars, or the trains, etc.) as well. We have an SEAIR system in every region and in every plane, with interaction between them.

Space Spread

Barcelona Sierra Leone

(𝑆𝐸𝐴𝐼𝑅)𝐵 (𝑆𝐸𝐴𝐼𝑅)𝑆𝐿

(𝑠𝑒𝑎𝑖𝑟 )𝑆𝐿→𝐵

(𝑠𝑒𝑎𝑖𝑟 )𝐵→𝑆𝐿