Dataiku - hadoop ecosystem - @Epitech Paris - janvier 2014

How do ElephantMake Babies

Florian DouetteauCEO, Dataiku

Agenda

• Part #1 Big Data

• Part #2 Why Hadoop, How, and When

• Part #3 Overview of the Coding EcosystemPig / Hive / Cascading

• Part #4 Overview of the Machine Learning EcosystemMahout

• Part #5 Overview of the Extended Ecosystem

Dataiku 1/8/14

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PART #1BIG

DATA

Dataiku

Collocation

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Big AppleBig MamaBig Data

A familiar grouping of words, especially words that habitually appear together and thereby convey meaning by association.

Collocation:

Dataiku

“Big” Data in 1999

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struct Element { Key key; void* stat_data ;}….

C Optimized Data structuresPerfect HashingHP-UNIX Servers – 4GB Ram100 GB dataWeb Crawler – Socket reuse HTTP 0.9

1 Month

Dataiku

Hadoop Java / Pig / Hive / Scala / Closure / … A Dozen NoSQL data store MPP Databases Real-Time

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Big Data in 2013

1 Hour

To Hadoop

1 TB? $

Social Gaming2011Web Search

1999

Logistics2004

Online Advertising2012

1 TB100M $

E-Commerce2013Banking

CRM2008

1 TB1B $

Web Search2010

100 TB? $

10 TB10M $

1000TB500M $

50TB1B$

SQL OR AD HOC SQL + HADOOP

Dataiku - Data Tuesday

Meet Hal Alowne

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Big Guys• 10B$+ Revenue• 100M+ customers• 100+ Data Scientist

Hal AlowneBI ManagerDim’s Private Showroom

Hey Hal ! We need a big data platform

like the big guys.Let’s just do as they do!

‟”European E-commerce Web

site• 100M$ Revenue• 1 Million customer• 1 Data Analyst (Hal Himself)

Dim SumCEO & Founder Dim’s Private Showroom

Big DataCopy Cat Project

QUESTION #1IS IT EASY OR

NOT ?

SUBTLE PATTERNS

"MORE BUSINESS"

BUTTONS

QUESTION #2WHO TO HIRE ?

DATA SCIENTISTAT NIGHT

DATA CLEANERTHE DAY

PARADOX #3

WHERE ?

MY DATAIS WORTH MILLIONS

I SEND IT TO THE MARKETING CLOUD

QUERSTION #4IS IT BIG OR

NOT ?

WE ALL LIVE IN A BIG DATA

LAKE

ALL MY DATAPROBABLY FITS IN HERE

QUESTION #5 (at last)

HUMAN OR NOT ?

MACHINELEARNINGWILL SAVEUS ALL

I JUST WANT MORE

REPORTS

Dataiku

MERIT = TIME + ROI

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Targeted Newsletter

RecommenderSystems

Adapted Product/ Promotions

TIME : 6 MONTHS

ROI : APPS

Build a lab in 6 months

(rather than 18 months)

Find the right people

(6 months?)

Choose the technology(6 months?)

Make it work (6 months?)

Build the lab (6 months)

Deploy apps that actually deliver value

2013 2014

2013

• Train People• Reuse working

patterns

Dataiku

Statistics and Machine Learning is complex !

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Try to understand myself

Dataiku

(Some Book you might want to read)

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Dataiku - Pig, Hive and Cascading

CHOOSE TECHNOLOGY

HadoopCeph

Sphere

Cassandra

Kafka Flume

Spark Storm

Scikit-Learn GraphLAB prediction.io jubatusMahout

WEKAMLBase LibSVM

SASRapidMiner

SPSS Panda

QlickViewTableau

KibanaSpotFire D3

InfiniDB DrillVertica

GreenPlumImpalaNetezza

ElasticSearch

SOLR

MongoDBRiak CouchBase

Pig Cascading

Talend

Machine Learning Mystery Land

Scalability CentralNoSQL-Slavia

SQL Colunnar Republic

Vizualization County Data Clean

Wasteland

Statistician Old House

R Real-time island

Dataiku

Business Intelligence Stack as Scalability and maintenance issues

Backoffice implements business rules that are challenged

Existing infrastructure cannot cope with per-user information

Main Pain Point:23 hours 52 minutes to compute Business Intelligence aggregates for one day.

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Big Data Use Case #1Manage Volumes

Dataiku - Data Tuesday

• Relieve their current DWH and

accelerate production of some aggregates/KPIs

• Be the backbone for new personalized user experience on their website: more recommendations, more profiling, etc.,

• Train existing people around machine learning and segmentation experience

1h12 to perform the aggregate, available every morning

New home page personalization deployed in a few weeks

Hadoop Cluster (24 cores)Google Compute EnginePython + R + Vertica12 TB dataset6 weeks projects

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Big Data Use Case #1Manage Volumes

Dataiku

A very large community

Some mid-size communities

Lots of small clusters mostly 2 players)

Correlation◦ between community size and

engagement / virality

Meaningul patterns◦ 2 players / Family / Group

What is the minimum number of friends to have in the application to get additional engagement ?

Big Data Use Case #2Find Patterns

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How do I (pre)process data?

Implicit User Data(Views, Searches…)

Content Data(Title, Categories, Price, …)

Explicit User Data(Click, Buy, …)

User Information(Location, Graph…)

500TB

50TB

1TB

200GB

Transformation Matrix

Transformation Predictor

Per User Stats

Per Content Stats

User Similarity

Rank Predictor

Content Similarity

A/B Test Data

Predictor Runtime

Online User Information

Always the same

Pour Data In

Compute Something

Smart About It

Make Available

The Questions

Pour Data In

Compute Something

Smart About It

Make Available

How often ? What kind of interaction? How much ?

How complex ? Do you need all data at once ? How incremental ?

Interaction ? Random Access ?

PART #2AT THE

BEGINNING

WAS THE ELEPHANT

The Text Use Case

Pour Data In

Compute Something

Smart About It

Make Available

Large Volume 1TBTextual Like Data(Logs, Docs,….)

Massive Global TransformationThen Aggregation(Counting, Invert Index, ….)

Every Day

What’s Difficult (back in 2000)

• Large Data won’t fit in one server

• Large computation (a few hours) are bound to fail one time or another

• Data is so big that my memory is too big to perform full aggregations

• Parallelization with threading is error-prone

• Data is so big that my Ethernet cable is not that big

What’s Difficult (back in 2000)

• Large Data won’t fit in one server

• Large computation (a few hours) are bound to fail one time or another

• Data is so big that my memory is too big to perform full aggregations

• Parallelization with threading is error-prone

• Data is so big that my Ethernet cable is not that big

HDFS

JOB TRACKER

MAP REDUCE

MapReduceHow to count works in many many boxes

MapReducePREREQUESITES

41

GROUPS CAN BE DETERMINED

AT THE ROW LEVEL

AGGREGATION OPERATION IS IDEMPOTENT

Questions ?

PART #3CODING HADOOP


Yahoo Research in 2006 Inspired from Sawzall, a Google Paper from

2003 2007 as an Apache Project

Initial motivation◦ Search Log Analytics: how long is the average user

session ? how many links does a user click ? on before leaving a website ? how do click patterns vary in the course of a day/week/month ? …

Pig History

words = LOAD '/training/hadoop-wordcount/output‘ USING PigStorage(‘\t’)

AS (word:chararray, count:int);

sorted_words = ORDER words BY count DESC;first_words = LIMIT sorted_words 10;

DUMP first_words;


Developed by Facebook in January 2007

Open source in August 2008

Initial Motivation◦ Provide a SQL like abstraction to perform statistics on

status updates

Hive History

create external table wordcounts ( word string, count int) row format delimited fields terminated by '\t' location '/training/hadoop-wordcount/output';

select * from wordcounts order by count desc limit 10;

select SUM(count) from wordcounts where word like ‘th%’;


Authored by Chris Wensel 2008

Associated Projects◦ Cascalog : Cascading in Closure◦ Scalding : Cascading in Scala (Twitter in 2012)◦ Lingual ( to be released soon): SQL layer on

top of cascading

Cascading History

Dataiku - Innovation Services

Pig & HiveMapping to Mapreduce jobs

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excluded

events = LOAD ‘/events’ USING PigStorage(‘\t’) AS (type:chararray, user:chararray, price:int, timestamp:int);

events_filtered = FILTER events BY type;

by_user = GROUP events_filtered BY user;

price_by_user = FOREACH by_user GENERATE type, SUM(price) AS total_price, MAX(timestamp) as max_ts;

high_pbu = FILTER price_by_user BY total_price > 1000;

Job 1 : Mapper Job 1 : Reducer1

LOAD FILTER GROUP FOREACH FILTERShuffle and sort by user


Pig & HiveMapping to Mapreduce jobs

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events = LOAD ‘/events’ USING PigStorage(‘\t’) AS (type:chararray, user:chararray, price:int, timestamp:int);

events_filtered = FILTER events BY type;

by_user = GROUP events_filtered BY user;

price_by_user = FOREACH by_user GENERATE type, SUM(price) AS total_price, MAX(timestamp) as max_ts;

high_pbu = FILTER price_by_user BY total_price > 1000;

recent_high = ORDER high_pbu BY max_ts DESC;

STORE recent_high INTO ‘/output’;

Job 1: Mapper Job 1 :Reducer

LOAD FILTER GROUP FOREACH FILTERShuffle and sort by user

Job 2: Mapper Job 2: Reducer

LOAD(from tmp)

STOREShuffle and sort by max_ts


Pig How does it work

Data Execution Plan compiled into 10 map reduce jobs executed in parallel (or not)


Reducer 2Mappers output

Reducer 1

Hive JoinsHow to join with MapReduce ?

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tbl_idx uid name

1 1 Dupont

1 2 Durand

tbl_idx uid type

2 1 Type1

2 1 Type2

2 2 Type1

Shuffle by uidSort by (uid,

tbl_idx)

Uid Tbl_idx Name Type

1 1 Dupont

1 2 Type1

1 2 Type2

Uid Tbl_idx Name Type

2 1 Durand

2 2 Type1

Uid Name Type

1 Dupont Type1

1 Dupont Type2

Uid Name Type

2 Durand Type1

WHAT IS THE BEST TOOL ?


Philosophy◦ Procedural Vs Declarative◦ Data Model and Schema

Productivity◦ Headachability ◦ Checkpointing◦ Testing and environment

Integration◦ Partitioning◦ Formats Integration◦ External Code Integration

Performance and optimization

Comparing without Comparable


Transformation as a sequence of operations

Transformation as a set of formulas

Procedural Vs Declarative

insert into ValuableClicksPerDMA select dma, count(*)from geoinfo join (

select name, ipaddr from users join clicks on (users.name = clicks.user)

where value > 0;) using ipaddr

group by dma;

Users = load 'users' as (name, age, ipaddr);Clicks = load 'clicks' as (user, url, value);ValuableClicks = filter Clicks by value > 0;UserClicks = join Users by name, ValuableClicks by user;Geoinfo = load 'geoinfo' as (ipaddr, dma);UserGeo = join UserClicks by ipaddr, Geoinfo by ipaddr;ByDMA = group UserGeo by dma;ValuableClicksPerDMA = foreach ByDMA generate group, COUNT(UserGeo);store ValuableClicksPerDMA into 'ValuableClicksPerDMA';


All three Extend basic data model with extended data types ◦ array-like [ event1, event2, event3] ◦ map-like { type1:value1, type2:value2, …}

Different approach◦ Resilient Schema ◦ Static Typing ◦ No Static Typing

Data type and ModelRationale

Dataiku Training – Hadoop for Data Science

HiveData Type and Schema

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Simple type Details

TINYINT, SMALLINT, INT, BIGINT 1, 2, 4 and 8 bytes

FLOAT, DOUBLE 4 and 8 bytes

BOOLEAN

STRING Arbitrary-length, replaces VARCHAR

TIMESTAMP

Complex type Details

ARRAY Array of typed items (0-indexed)

MAP Associative map

STRUCT Complex class-like objects

CREATE TABLE visit (user_name STRING,user_id INT,user_details STRUCT<age:INT, zipcode:INT>

);


rel = LOAD '/folder/path/'USING PigStorage(‘\t’)AS (col:type, col:type, col:type);

Data types and SchemaPig

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Simple type Details

int, long, float, double

32 and 64 bits, signed

chararray A string

bytearray An array of … bytes

boolean A boolean


tuple a tuple is an ordered fieldname:value map

bag a bag is a set of tuples


Support for Any Java Types, provided they can be serialized in Hadoop

No support for Typing

Data Type and Schema Cascading

Simple type Details

Int, Long, Float, Double

32 and 64 bits, signed

String A string

byte[] An array of … bytes

Boolean A boolean


Object Object must be « Hadoop serializable »


Style Summary

Style Typing Data Model Metadata store

Pig Procedural Static + Dynamic

scalar + tuple+ bag

(fully recursive)

No (HCatalog)

Hive Declarative Static + Dynamic,

enforced at execution

time

scalar+ list + map

Integrated

Cascading Procedural Weak scalar+ java objects

No



Productivity◦ Headachability ◦ Checkpointing◦ Testing, error management and environment

Integration◦ Partitioning◦ Formats Integration◦ External Code Integration




Does debugging the tool lead to bad headaches ?

HeadachilityMotivation


Out Of Memory Error (Reducer)

Exception in Building /

Extended Functions

(handling of null)

Null vs “”

Nested Foreach and scoping

Date Management (pig 0.10)

Field implicit ordering

HeadachesPig


A Pig Error


Out of Memory Errors in

Reducers

Few Debugging Options

Null / “”

No builtin “first”

HeadachesHive


Weak Typing Errors (comparing

Int and String … )

Illegal Operation Sequence

(Group after group …)

Field Implicit Ordering

HeadachesCascading


How to perform unit tests ? How to have different versions of the same script

(parameter) ?

TestingMotivation


System Variables Comment to test No Meta Programming pig –x local to execute on local files

TestingPig


Junit Tests are possible Ability to use code to actually comment out some

variables

Testing / Environment Cascading


Lots of iteration while developing on Hadoop Sometime jobs fail Sometimes need to restart from the start …

Checkpointing Motivation

Page User Correlation

OutputFilteringParse Logs

Per Page Stats

FAIL

FIX and relaunch


STORE Command to manually

store files

PigManual Checkpointing



Per Page Stats

// COMMENT Beginning of script and relaunch


Ability to re-run a flow automatically from the last saved checkpoint

Cascading Automated Checkpointing

addCheckpoint(…)


Check each file intermediate timestamp Execute only if more recent

Cascading Topological Scheduler



Per Page Stats


Productivity Summary

Headaches Checkpointing/Replay

Testing / Metaprogrammation

Pig Lots Manual Save Difficult Meta programming, easy

local testing

Hive Few, but without

debugging options

None (That’s SQL) None (That’s SQL)

Cascading Weak TypingComplexity

Checkpointing Partial Updates

Possible




Integration◦ Formats Integration◦ Partitioning◦ External Code Integration




Ability to integrate different file formats◦ Text Delimited◦ Sequence File (Binary Hadoop format)◦ Avro, Thrift ..

Ability to integrate with external data sources or sink ( MongoDB, ElasticSearch, Database. …)

Formats IntegrationMotivation

Format Size on Disk (GB) HIVE Processing time (24 cores)

Text File, uncompressed 18.7 1m32s

1 Text File, Gzipped 3.89 6m23s (no parallelization)

JSON compressed 7.89 2m42s

multiple text file gzipped 4.02 43s

Sequence File, Block, Gzip 5.32 1m18s

Text File, LZO Indexed 7.03 1m22s

Format impact on size and performance


Hive: Serde (Serialize-Deserializer) Pig : Storage Cascading: Tap

Format Integration


No support for “UPDATE” patterns, any increment is performed by adding or deleting a partition

Common partition schemas on Hadoop◦ By Date /apache_logs/dt=2013-01-23◦ By Data center /apache_logs/dc=redbus01/…◦ By Country◦ …◦ Or any combination of the above

PartitionsMotivation


Hive PartitioningPartitioned tables

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CREATE TABLE event (user_id INT,type STRING,message STRING)

PARTITIONED BY (day STRING, server_id STRING);

Disk structure

/hive/event/day=2013-01-27/server_id=s1/file0/hive/event/day=2013-01-27/server_id=s1/file1/hive/event/day=2013-01-27/server_id=s2/file0/hive/event/day=2013-01-27/server_id=s2/file1…/hive/event/day=2013-01-28/server_id=s2/file0/hive/event/day=2013-01-28/server_id=s2/file1

INSERT OVERWRITE TABLE event PARTITION(ds='2013-01-27', server_id=‘s1’)SELECT * FROM event_tmp;


No Direct support for partition Support for “Glob” Tap, to build read from files using patterns

➔ You can code your own custom or virtual partition schemes

Cascading Partition

Florian Douetteau

TODO


External Code IntegrationSimple UDF

Pig Hive

Cascading


Hive Complex UDF(Aggregators)


Cascading Direct Code Evaluation

Uses Janino, a very cool project: http://docs.codehaus.org/display/JANINO


IntegrationSummary

Partition/Incremental Updates

External Code Format Integration

Pig No Direct Support

Simple Doable and rich community

Hive Fully integrated, SQL Like

Very simple, but complex dev setup

Doable and existing community

Cascading With Coding Complex UDFS but regular, and Java Expression

embeddable

Doable and growing

commuinty

Florian Douetteau

Compare different version




Integration◦ Formats Integration◦ Partitioning◦ External Code Integration




Several Common Map Reduce Optimization Patterns◦ Combiners◦ MapJoin◦ Job Fusion◦ Job Parallelism◦ Reducer Parallelism

Different support per framework◦ Fully Automatic◦ Pragma / Directives / Options◦ Coding style / Code to write

Optimization


SELECT date, COUNT(*) FROM product GROUP BY date

CombinerPerform Partial Aggregate at Mapper Stage

Map

Reduce2012-02-14 4354

…

2012-02-15 21we2

2012-02-14 qa334

…

2012-02-15 23aq2

2012-02-14 20

2012-02-15 35

2012-02-16 1

2012-02-14 4354

…

2012-02-15 21we2

2012-02-14 qa334

…

2012-02-15 23aq2


SELECT date, COUNT(*) FROM product GROUP BY date

CombinerPerform Partial Aggregate at Mapper Stage

Map

Reduce2012-02-14 4354

…

2012-02-15 21we2

2012-02-14 qa334

…

2012-02-15 23aq2

2012-02-14 12

2012-02-15 23

2012-02-16 1

2012-02-14 8

2012-02-15 12

2012-02-14 20

2012-02-15 35

2012-02-16 1

Reduced network bandwith. Better parallelism


Join OptimizationMap Join

set hive.auto.convert.join = true;

Hive

Pig

Cascading

( no aggregation support after HashJoin)


Critical for performance

Estimated per the size of input file◦ Hive

divide size per hive.exec.reducers.bytes.per.reducer (default 1GB)◦ Pig

divide size pig.exec.reducers.bytes.per.reducer (default 1GB)

Number of Reducers


CombinerOptimization

JoinOptimization

Number of reducers optimization

Pig Automatic Option Estimate or DIY

Cascading DIY HashJoin DIY

Hive PartialDIY

Automatic(Map Join)

Estimate or DIY

Performance & Optimization Summary

Questions ?

PART #4QUICK

MAHOUT

Clustering

c

Revenue

Age

Clustering

c

Revenue

Age

One Cluster

Centroid== Center

of the cluster

clustering applications

• Fraud: Detect Outliers

• CRM : Mine for customer segments

• Image Processing : Similar Images

• Search : Similar documents

• Search : Allocate Topics

K-Means

Guess an initial placement for centroids

Assign each point to closest Center

Reposition Center

MAP

REDUCE

clustering challenges

• Curse of Dimensionality

• Choice of distance / number of parameters

• Performance

• Choice # of clusters

Mahout Clustering Challenges

• No Integrated Feature Engineering Stack:Get ready to write data processing in Java

• Hadoop SequenceFile required as an input

• Iterations as Map/Reduce read and write to disks: Relatively slow compared to in-memory processing

Data Processing

Data ProcessingVectorized

Data

Image

Voice

Log / DB

Mahout K-Means on Text Workflow

mahoutseqdirectory

mahoutseq2parse

mahoutkmeans

Text Files

Mahout Sequence Files

Tfidf Vectors

Clusters

Mahout K-Means on Database Extract Worflow

org.apache.mahout.clustering.conversion.InputDriver

mahoutkmeans

Database Dump (CSV)

Mahout Vectors

Clusters

Convert a CSV File to Mahout Vector

• Real Code would have

• Converting Categorical variables to dimensions

• Variable Rescaling

• Dropping IDs (name, forname …)

Mahout AlgorithmsParameters Implicit Assumption Ouput

K-MeansK (number of clusters)

ConvergenceCircles Point -> ClusterId

Fuzzy K-MeansK (number of clusters)

ConvergenceCircles

Point -> ClusterId * , Probability

Expectation Maximization

K (Number of clusterS)Convergence

Gaussian distributionPoint -> ClusterId*,

Probability

Mean-Shift Clustering

Distance boundaries, Convergence

Gradient like distribution Point -> Cluster ID

Top Down Clustering

Two Clustering Algorithns HierarchyPoint -> Large ClusterId,

Small ClusterId

Dirichlet Process

Model DistributionPoints are a mixture of

distributionPoint -> ClusterId,

Probability

Spectral Clustering

- - Point -> ClusterId

MinHash Clustering

Number of hash / keysHash Type

High Dimension Point -> Hash*

Comparing ClusteringKMean

sDirichl

etFuzzy

KMeans

MeanShift

Questions ?

PART #5

ELEPHANT MAKE BABIES

What if ?

Pour Data In

Compute Something

Smart About It

Make Available

Data Comes continously ?

Aggregation patterns are not “hashable”

Human Interaction requires results fast or incrementally available ?

After Hadoop

Massive BatchMap Reduce Over

HDFS

Random Access

Faster in Memory Computation

In Memory MultiCore Machine Learning

Real-Time Distributed Computation

Faster SQL Analytics Queries

HBase• Started by Powerset (now in Bing) in 2007

• Provide a key-value store on top of Hadoop

GRAPHLAB• High-Perfomance, distributed computing framework, in C++

• Started in 2009, Carneggie-Mellon

• Main application in Machine Learning Tasks: Topic Modeling, Collaborative Filtering, Computer Vision

• Can read data in HDFS

SPARK• Developped in 2010 at UC Berkeley

• Provide a distributed memory abstraction for efficient sequence of map/filter/join applications.

• Can Read/Store to HDFS or file

STORM• Developped in 2011 by Nathan Marz at

BackType (then Twitter)

• Provide a framework for distributed real-time fault tolerant computation

• Not a message queuing system, a complex event processing system

STORM WITH HADOOP

IMPALA• Started by Cloudera in 2012

• Provide real-time answers to SQL Queries on top of HDFS

BENCHMARK

Questions ?

Dataiku - hadoop ecosystem - @Epitech Paris - janvier 2014

Technology

Transcript of Dataiku - hadoop ecosystem - @Epitech Paris - janvier 2014