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Data Mining Association Analysis
Introduction to Data Miningby
Tan, Steinbach, Kumar
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 1
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 2
Association Rule Mining
Given a set of transactions, find rules that will predict the occurrence of an item based on the occurrences of other items in the transaction
Market-Basket transactions
TID Items
1 Bread, Milk
2 Bread, Diaper, Beer, Eggs
3 Milk, Diaper, Beer, Coke
4 Bread, Milk, Diaper, Beer
5 Bread, Milk, Diaper, Coke
Example of Association Rules
{Diaper} {Beer},{Milk, Bread} {Eggs,Coke},{Beer, Bread} {Milk},
Implication means co-occurrence, not causality!
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 3
Definition: Frequent Itemset
Itemset– A collection of one or more items
Example: {Milk, Bread, Diaper}
– k-itemset An itemset that contains k items
Support count ()– Frequency of occurrence of an itemset
– E.g. ({Milk, Bread,Diaper}) = 2
Support– Fraction of transactions that contain an
itemset
– E.g. s({Milk, Bread, Diaper}) = 2/5
Frequent Itemset– An itemset whose support is greater
than or equal to a minsup threshold
TID Items
1 Bread, Milk
2 Bread, Diaper, Beer, Eggs
3 Milk, Diaper, Beer, Coke
4 Bread, Milk, Diaper, Beer
5 Bread, Milk, Diaper, Coke
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 4
Definition: Association Rule
Example:Beer}Diaper,Milk{
4.052
|T|)BeerDiaper,,Milk(
s
67.032
)Diaper,Milk()BeerDiaper,Milk,(
c
Association Rule– An implication expression of the form
X Y, where X and Y are itemsets
– Example: {Milk, Diaper} {Beer}
Rule Evaluation Metrics– Support (s)
Fraction of transactions that contain both X and Y
– Confidence (c) Measures how often items in Y
appear in transactions thatcontain X
TID Items
1 Bread, Milk
2 Bread, Diaper, Beer, Eggs
3 Milk, Diaper, Beer, Coke
4 Bread, Milk, Diaper, Beer
5 Bread, Milk, Diaper, Coke
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 5
Association Rule Mining Task
Given a set of transactions T, the goal of association rule mining is to find all rules having – support ≥ minsup threshold
– confidence ≥ minconf threshold
Brute-force approach:– List all possible association rules
– Compute the support and confidence for each rule
– Prune rules that fail the minsup and minconf thresholds
Computationally prohibitive!
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 6
Mining Association Rules
Example of Rules:
{Milk,Diaper} {Beer} (s=0.4, c=0.67){Milk,Beer} {Diaper} (s=0.4, c=1.0){Diaper,Beer} {Milk} (s=0.4, c=0.67){Beer} {Milk,Diaper} (s=0.4, c=0.67) {Diaper} {Milk,Beer} (s=0.4, c=0.5) {Milk} {Diaper,Beer} (s=0.4, c=0.5)
TID Items
1 Bread, Milk
2 Bread, Diaper, Beer, Eggs
3 Milk, Diaper, Beer, Coke
4 Bread, Milk, Diaper, Beer
5 Bread, Milk, Diaper, Coke
Observations:
• All the above rules are binary partitions of the same itemset: {Milk, Diaper, Beer}
• Rules originating from the same itemset have identical support but can have different confidence
• Thus, we may decouple the support and confidence requirements
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 7
Mining Association Rules
Two-step approach: 1. Frequent Itemset Generation
– Generate all itemsets whose support minsup
2. Rule Generation– Generate high confidence rules from each frequent itemset,
where each rule is a binary partitioning of a frequent itemset
Frequent itemset generation is still computationally expensive
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 8
Frequent Itemset Generation
null
AB AC AD AE BC BD BE CD CE DE
A B C D E
ABC ABD ABE ACD ACE ADE BCD BCE BDE CDE
ABCD ABCE ABDE ACDE BCDE
ABCDE
Given d items, there are 2d possible candidate itemsets
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 9
Frequent Itemset Generation
Brute-force approach: – Each itemset in the lattice is a candidate frequent itemset
– Count the support of each candidate by scanning the database
– Match each transaction against every candidate
– Complexity ~ O(NMw) => Expensive since M = 2d !!!
TID Items 1 Bread, Milk 2 Bread, Diaper, Beer, Eggs 3 Milk, Diaper, Beer, Coke 4 Bread, Milk, Diaper, Beer 5 Bread, Milk, Diaper, Coke
N
Transactions List ofCandidates
M
w
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 10
Computational Complexity
Given d unique items:– Total number of itemsets = 2d
– Total number of possible association rules:
123 1
1
1 1
dd
d
k
kd
j j
kd
k
dR
If d=6, R = 602 rules
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 11
Frequent Itemset Generation Strategies
Reduce the number of candidates (M)– Complete search: M=2d
– Use pruning techniques to reduce M
Reduce the number of transactions (N)– Reduce size of N as the size of itemset increases– Used by DHP and vertical-based mining algorithms
Reduce the number of comparisons (NM)– Use efficient data structures to store the candidates or
transactions– No need to match every candidate against every
transaction
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 12
Reducing Number of Candidates
Apriori principle:– If an itemset is frequent, then all of its subsets must also
be frequent
Apriori principle holds due to the following property of the support measure:
– Support of an itemset never exceeds the support of its subsets
– This is known as the anti-monotone property of support
)()()(:, YsXsYXYX
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 13
Found to be Infrequent
null
AB AC AD AE BC BD BE CD CE DE
A B C D E
ABC ABD ABE ACD ACE ADE BCD BCE BDE CDE
ABCD ABCE ABDE ACDE BCDE
ABCDE
Illustrating Apriori Principle
null
AB AC AD AE BC BD BE CD CE DE
A B C D E
ABC ABD ABE ACD ACE ADE BCD BCE BDE CDE
ABCD ABCE ABDE ACDE BCDE
ABCDEPruned supersets
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 14
Illustrating Apriori Principle
Item CountBread 4Coke 2Milk 4Beer 3Diaper 4Eggs 1
Itemset Count{Bread,Milk} 3{Bread,Beer} 2{Bread,Diaper} 3{Milk,Beer} 2{Milk,Diaper} 3{Beer,Diaper} 3
Itemset Count {Bread,Milk,Diaper} 3
Items (1-itemsets)
Pairs (2-itemsets)
(No need to generatecandidates involving Cokeor Eggs)
Triplets (3-itemsets)Minimum Support = 3
If every subset is considered, 6C1 + 6C2 + 6C3 = 41
With support-based pruning,6 + 6 + 1 = 13
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 15
Apriori Algorithm
Method:
– Let k=1– Generate frequent itemsets of length 1– Repeat until no new frequent itemsets are identified
Generate length (k+1) candidate itemsets from length k frequent itemsets
Prune candidate itemsets containing subsets of length k that are infrequent
Count the support of each candidate by scanning the DB Eliminate candidates that are infrequent, leaving only those
that are frequent
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 16
Reducing Number of Comparisons
Candidate counting:– Scan the database of transactions to determine the
support of each candidate itemset– To reduce the number of comparisons, store the
candidates in a hash structure Instead of matching each transaction against every candidate, match it against candidates contained in the hashed buckets
TID Items 1 Bread, Milk 2 Bread, Diaper, Beer, Eggs 3 Milk, Diaper, Beer, Coke 4 Bread, Milk, Diaper, Beer 5 Bread, Milk, Diaper, Coke
N
Transactions Hash Structure
k
Buckets
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 17
Generate Hash Tree
2 3 45 6 7
1 4 51 3 6
1 2 44 5 7 1 2 5
4 5 81 5 9
3 4 5 3 5 63 5 76 8 9
3 6 73 6 8
1,4,7
2,5,8
3,6,9Hash function
Suppose you have 15 candidate itemsets of length 3:
{1 4 5}, {1 2 4}, {4 5 7}, {1 2 5}, {4 5 8}, {1 5 9}, {1 3 6}, {2 3 4}, {5 6 7}, {3 4 5}, {3 5 6}, {3 5 7}, {6 8 9}, {3 6 7}, {3 6 8}
You need:
• Hash function
• Max leaf size: max number of itemsets stored in a leaf node (if number of candidate itemsets exceeds max leaf size, split the node)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 18
Association Rule Discovery: Hash tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1,4,7
2,5,8
3,6,9
Hash Function Candidate Hash Tree
Hash on 1, 4 or 7
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 19
Association Rule Discovery: Hash tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1,4,7
2,5,8
3,6,9
Hash Function Candidate Hash Tree
Hash on 2, 5 or 8
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 20
Association Rule Discovery: Hash tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1,4,7
2,5,8
3,6,9
Hash Function Candidate Hash Tree
Hash on 3, 6 or 9
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 21
Subset Operation
1 2 3 5 6
Transaction, t
2 3 5 61 3 5 62
5 61 33 5 61 2 61 5 5 62 3 62 5
5 63
1 2 31 2 51 2 6
1 3 51 3 6
1 5 62 3 52 3 6
2 5 6 3 5 6
Subsets of 3 items
Level 1
Level 2
Level 3
63 5
Given a transaction t, what are the possible subsets of size 3?
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 22
Subset Operation Using Hash Tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1 2 3 5 6
1 + 2 3 5 63 5 62 +
5 63 +
1,4,7
2,5,8
3,6,9
Hash Functiontransaction
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 23
Subset Operation Using Hash Tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1,4,7
2,5,8
3,6,9
Hash Function1 2 3 5 6
3 5 61 2 +
5 61 3 +
61 5 +
3 5 62 +
5 63 +
1 + 2 3 5 6
transaction
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 24
Subset Operation Using Hash Tree
1 5 9
1 4 5 1 3 63 4 5 3 6 7
3 6 8
3 5 6
3 5 7
6 8 9
2 3 4
5 6 7
1 2 4
4 5 71 2 5
4 5 8
1,4,7
2,5,8
3,6,9
Hash Function1 2 3 5 6
3 5 61 2 +
5 61 3 +
61 5 +
3 5 62 +
5 63 +
1 + 2 3 5 6
transaction
Match transaction against 11 out of 15 candidates
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 25
Projected Database
TID Items1 {A,B}2 {B,C,D}3 {A,C,D,E}4 {A,D,E}5 {A,B,C}6 {A,B,C,D}7 {B,C}8 {A,B,C}9 {A,B,D}10 {B,C,E}
TID Items1 {B}2 {}3 {C,D,E}4 {D,E}5 {B,C}6 {B,C,D}7 {}8 {B,C}9 {B,D}10 {}
Original Database:Projected Database for node A:
For each transaction T, projected transaction at node A is T E(A)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 26
ECLAT
For each item, store a list of transaction ids (tids)
TID Items1 A,B,E2 B,C,D3 C,E4 A,C,D5 A,B,C,D6 A,E7 A,B8 A,B,C9 A,C,D
10 B
HorizontalData Layout
A B C D E1 1 2 2 14 2 3 4 35 5 4 5 66 7 8 97 8 98 109
Vertical Data Layout
TID-list
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 27
ECLAT
Determine support of any k-itemset by intersecting tid-lists of two of its (k-1) subsets.
3 traversal approaches: – top-down, bottom-up and hybrid
Advantage: very fast support counting Disadvantage: intermediate tid-lists may become too large
for memory
A1456789
B1257810
AB1578
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 28
Rule Generation
Given a frequent itemset L, find all non-empty subsets f L such that f L – f satisfies the minimum confidence requirement– If {A,B,C,D} is a frequent itemset, candidate rules:
ABC D, ABD C, ACD B, BCD A, A BCD, B ACD, C ABD, D ABCAB CD, AC BD, AD BC, BC AD, BD AC, CD AB,
If |L| = k, then there are 2k – 2 candidate association rules (ignoring L and L)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 29
Sequence Data
10 15 20 25 30 35
235
61
1
Timeline
Object A:
Object B:
Object C:
456
2 7812
16
178
Object Timestamp EventsA 10 2, 3, 5A 20 6, 1A 23 1B 11 4, 5, 6B 17 2B 21 7, 8, 1, 2B 28 1, 6C 14 1, 8, 7
Sequence Database:
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 30
Examples of Sequence Data
Sequence Database
Sequence Element (Transaction)
Event(Item)
Customer Purchase history of a given customer
A set of items bought by a customer at time t
Books, diary products, CDs, etc
Web Data Browsing activity of a particular Web visitor
A collection of files viewed by a Web visitor after a single mouse click
Home page, index page, contact info, etc
Event data History of events generated by a given sensor
Events triggered by a sensor at time t
Types of alarms generated by sensors
Genome sequences
DNA sequence of a particular species
An element of the DNA sequence
Bases A,T,G,C
Sequence
E1E2
E1E3
E2E3E4E2
Element (Transaction
)
Event (Item)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 31
Formal Definition of a Sequence
A sequence is an ordered list of elements (transactions)
s = < e1 e2 e3 … >
– Each element contains a collection of events (items)
ei = {i1, i2, …, ik}
– Each element is attributed to a specific time or location
Length of a sequence, |s|, is given by the number of elements of the sequence
A k-sequence is a sequence that contains k events (items)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 32
Examples of Sequence
Web sequence:
< {Homepage} {Electronics} {Digital Cameras} {Canon Digital Camera} {Shopping Cart} {Order Confirmation} {Return to Shopping} >
Sequence of initiating events causing the nuclear accident at 3-mile Island:(http://stellar-one.com/nuclear/staff_reports/summary_SOE_the_initiating_event.htm)
< {clogged resin} {outlet valve closure} {loss of feedwater} {condenser polisher outlet valve shut} {booster pumps trip} {main waterpump trips} {main turbine trips} {reactor pressure increases}>
Sequence of books checked out at a library:<{Fellowship of the Ring} {The Two Towers} {Return of the King}>
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 33
Formal Definition of a Subsequence
A sequence <a1 a2 … an> is contained in another sequence <b1 b2 … bm> (m ≥ n) if there exist integers i1 < i2 < … < in such that a1 bi1 , a2 bi1, …, an bin
The support of a subsequence w is defined as the fraction of data sequences that contain w
A sequential pattern is a frequent subsequence (i.e., a subsequence whose support is ≥ minsup)
Data sequence Subsequence Contain?
< {2,4} {3,5,6} {8} > < {2} {3,5} > Yes
< {1,2} {3,4} > < {1} {2} > No
< {2,4} {2,4} {2,5} > < {2} {4} > Yes
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 34
Sequential Pattern Mining: Definition
Given: – a database of sequences
– a user-specified minimum support threshold, minsup
Task:– Find all subsequences with support ≥ minsup
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 35
Sequential Pattern Mining: Challenge
Given a sequence: <{a b} {c d e} {f} {g h i}>– Examples of subsequences:
<{a} {c d} {f} {g} >, < {c d e} >, < {b} {g} >, etc.
How many k-subsequences can be extracted from a given n-sequence?
<{a b} {c d e} {f} {g h i}> n = 9
k=4: Y _ _ Y Y _ _ _ Y
<{a} {d e} {i}>
1264
9
:Answer
k
n
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 36
Sequential Pattern Mining: Example
Minsup = 50%
Examples of Frequent Subsequences:
< {1,2} > s=60%< {2,3} > s=60%< {2,4}> s=80%< {3} {5}> s=80%< {1} {2} > s=80%< {2} {2} > s=60%< {1} {2,3} > s=60%< {2} {2,3} > s=60%< {1,2} {2,3} > s=60%
Object Timestamp EventsA 1 1,2,4A 2 2,3A 3 5B 1 1,2B 2 2,3,4C 1 1, 2C 2 2,3,4C 3 2,4,5D 1 2D 2 3, 4D 3 4, 5E 1 1, 3E 2 2, 4, 5
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 37
Extracting Sequential Patterns
Given n events: i1, i2, i3, …, in
Candidate 1-subsequences: <{i1}>, <{i2}>, <{i3}>, …, <{in}>
Candidate 2-subsequences:<{i1, i2}>, <{i1, i3}>, …, <{i1} {i1}>, <{i1} {i2}>, …, <{in-1} {in}>
Candidate 3-subsequences:<{i1, i2 , i3}>, <{i1, i2 , i4}>, …, <{i1, i2} {i1}>, <{i1, i2} {i2}>, …,
<{i1} {i1 , i2}>, <{i1} {i1 , i3}>, …, <{i1} {i1} {i1}>, <{i1} {i1} {i2}>, …
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 38
Generalized Sequential Pattern (GSP)
Step 1: – Make the first pass over the sequence database D to yield all the 1-
element frequent sequences
Step 2:
Repeat until no new frequent sequences are found– Candidate Generation:
Merge pairs of frequent subsequences found in the (k-1)th pass to generate candidate sequences that contain k items
– Candidate Pruning: Prune candidate k-sequences that contain infrequent (k-1)-subsequences
– Support Counting: Make a new pass over the sequence database D to find the support for these
candidate sequences
– Candidate Elimination: Eliminate candidate k-sequences whose actual support is less than minsup
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 39
Candidate Generation
Base case (k=2): – Merging two frequent 1-sequences <{i1}> and <{i2}> will produce two
candidate 2-sequences: <{i1} {i2}> and <{i1 i2}>
General case (k>2):– A frequent (k-1)-sequence w1 is merged with another frequent
(k-1)-sequence w2 to produce a candidate k-sequence if the subsequence obtained by removing the first event in w1 is the same as the subsequence obtained by removing the last event in w2
The resulting candidate after merging is given by the sequence w1 extended with the last event of w2.
– If the last two events in w2 belong to the same element, then the last event in w2 becomes part of the last element in w1
– Otherwise, the last event in w2 becomes a separate element appended to the end of w1
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 40
Candidate Generation Examples
Merging the sequences w1=<{1} {2 3} {4}> and w2 =<{2 3} {4 5}> will produce the candidate sequence < {1} {2 3} {4 5}> because the last two events in w2 (4 and 5) belong to the same element
Merging the sequences w1=<{1} {2 3} {4}> and w2 =<{2 3} {4} {5}> will produce the candidate sequence < {1} {2 3} {4} {5}> because the last two events in w2 (4 and 5) do not belong to the same element
We do not have to merge the sequences w1 =<{1} {2 6} {4}> and w2 =<{1} {2} {4 5}> to produce the candidate < {1} {2 6} {4 5}> because if the latter is a viable candidate, then it can be obtained by merging w1 with < {1} {2 6} {5}>
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 41
GSP Example
< {1} {2} {3} >< {1} {2 5} >< {1} {5} {3} >< {2} {3} {4} >< {2 5} {3} >< {3} {4} {5} >< {5} {3 4} >
< {1} {2} {3} {4} >< {1} {2 5} {3} >< {1} {5} {3 4} >< {2} {3} {4} {5} >< {2 5} {3 4} >
< {1} {2 5} {3} >
Frequent3-sequences
CandidateGeneration
CandidatePruning
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 42
Timing Constraints (I)
{A B} {C} {D E}
<= ms
<= xg >ng
xg: max-gap
ng: min-gap
ms: maximum span
Data sequence Subsequence Contain?
< {2,4} {3,5,6} {4,7} {4,5} {8} > < {6} {5} > Yes
< {1} {2} {3} {4} {5}> < {1} {4} > No
< {1} {2,3} {3,4} {4,5}> < {2} {3} {5} > Yes
< {1,2} {3} {2,3} {3,4} {2,4} {4,5}> < {1,2} {5} > No
xg = 2, ng = 0, ms= 4
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 43
Mining Sequential Patterns with Timing
Constraints
Approach 1:– Mine sequential patterns without timing constraints
– Postprocess the discovered patterns
Approach 2:– Modify GSP to directly prune candidates that violate
timing constraints
– Question: Does Apriori principle still hold?
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 44
Apriori Principle for Sequence Data
Object Timestamp EventsA 1 1,2,4A 2 2,3A 3 5B 1 1,2B 2 2,3,4C 1 1, 2C 2 2,3,4C 3 2,4,5D 1 2D 2 3, 4D 3 4, 5E 1 1, 3E 2 2, 4, 5
Suppose:
xg = 1 (max-gap)
ng = 0 (min-gap)
ms = 5 (maximum span)
minsup = 60%
<{2} {5}> support = 40%
but
<{2} {3} {5}> support = 60%
Problem exists because of max-gap constraint
No such problem if max-gap is infinite
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 45
Contiguous Subsequences
s is a contiguous subsequence of w = <e1>< e2>…< ek>
if any of the following conditions hold:1. s is obtained from w by deleting an item from either e1 or ek
2. s is obtained from w by deleting an item from any element ei that contains more than 2 items
3. s is a contiguous subsequence of s’ and s’ is a contiguous subsequence of w (recursive definition)
Examples: s = < {1} {2} > – is a contiguous subsequence of
< {1} {2 3}>, < {1 2} {2} {3}>, and < {3 4} {1 2} {2 3} {4} >
– is not a contiguous subsequence of < {1} {3} {2}> and < {2} {1} {3} {2}>
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 46
Modified Candidate Pruning Step
Without maxgap constraint:– A candidate k-sequence is pruned if at least one of its
(k-1)-subsequences is infrequent
With maxgap constraint:– A candidate k-sequence is pruned if at least one of its
contiguous (k-1)-subsequences is infrequent
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 47
Timing Constraints (II)
{A B} {C} {D E}
<= ms
<= xg >ng <= ws
xg: max-gap
ng: min-gap
ws: window size
ms: maximum span
Data sequence Subsequence Contain?
< {2,4} {3,5,6} {4,7} {4,6} {8} > < {3} {5} > No
< {1} {2} {3} {4} {5}> < {1,2} {3} > Yes
< {1,2} {2,3} {3,4} {4,5}> < {1,2} {3,4} > Yes
xg = 2, ng = 0, ws = 1, ms= 5
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 48
Modified Support Counting Step
Given a candidate pattern: <{a, c}>– Any data sequences that contain
<… {a c} … >,<… {a} … {c}…> ( where time({c}) – time({a}) ≤ ws) <…{c} … {a} …> (where time({a}) – time({c}) ≤ ws)
will contribute to the support count of candidate pattern
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 49
Other Formulation
In some domains, we may have only one very long time series– Example:
monitoring network traffic events for attacks monitoring telecommunication alarm signals
Goal is to find frequent sequences of events in the time series– This problem is also known as frequent episode mining
E1
E2
E1
E2
E1
E2
E3
E4 E3 E4
E1
E2
E2 E4
E3 E5
E2
E3 E5
E1
E2 E3 E1
Pattern: <E1> <E3>
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 50
General Support Counting Schemes
p
Object's TimelineSequence: (p) (q)
Method Support Count
COBJ 1
1
CWIN 6
CMINWIN 4
p qp
q qp
qqp
2 3 4 5 6 7
CDIST_O 8
CDIST 5
Assume:
xg = 2 (max-gap)
ng = 0 (min-gap)
ws = 0 (window size)
ms = 2 (maximum span)
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 51
Frequent Subgraph Mining
Extend association rule mining to finding frequent subgraphs
Useful for Web Mining, computational chemistry, bioinformatics, spatial data sets, etc
Databases
Homepage
Research
ArtificialIntelligence
Data Mining
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 52
Graph Definitions
a
b a
c c
b
(a) Labeled Graph
pq
p
p
rs
tr
t
qp
a
a
c
b
(b) Subgraph
p
s
t
p
a
a
c
b
(c) Induced Subgraph
p
rs
tr
p
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 53
Challenges
Node may contain duplicate labels Support and confidence
– How to define them?
Additional constraints imposed by pattern structure– Support and confidence are not the only constraints
– Assumption: frequent subgraphs must be connected
Apriori-like approach: – Use frequent k-subgraphs to generate frequent (k+1)
subgraphsWhat is k?
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 54
Challenges…
Support: – number of graphs that contain a particular subgraph
Apriori principle still holds
Level-wise (Apriori-like) approach:– Vertex growing:
k is the number of vertices
– Edge growing: k is the number of edges
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 55
Vertex Growing
a
a
e
a
p
q
r
p
a
a
a
p
rr
d
G1 G2
p
000
00
00
0
1
q
rp
rp
qpp
MG
000
0
00
00
2
r
rrp
rp
pp
MG
a
a
a
p
q
r
ep
0000
0000
00
000
00
3
q
r
rrp
rp
qpp
MG
G3 = join(G1,G2)
dr+
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 56
Edge Growing
a
a
f
a
p
q
r
p
a
a
a
p
rr
f
G1 G2
p
a
a
a
p
q
r
fp
G3 = join(G1,G2)
r+
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 57
Apriori-like Algorithm
Find frequent 1-subgraphs Repeat
– Candidate generation Use frequent (k-1)-subgraphs to generate candidate k-subgraph
– Candidate pruning Prune candidate subgraphs that contain infrequent (k-1)-subgraphs
– Support counting Count the support of each remaining candidate
– Eliminate candidate k-subgraphs that are infrequent
In practice, it is not as easy. There are many other issues
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 58
Example: Dataset
a
b
e
c
p
q
rp
a
b
d
p
r
G1 G2
q
e
c
a
p q
r
b
p
G3
d
rd
r
(a,b,p) (a,b,q) (a,b,r) (b,c,p) (b,c,q) (b,c,r) … (d,e,r)G1 1 0 0 0 0 1 … 0G2 1 0 0 0 0 0 … 0G3 0 0 1 1 0 0 … 0G4 0 0 0 0 0 0 … 0
a eq
c
d
p p
p
G4
r
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 59
Example
p
a b c d ek=1FrequentSubgraphs
a b
pc d
pc e
qa e
rb d
pa b
d
r
pd c
e
p
(Pruned candidate)
Minimum support count = 2
k=2FrequentSubgraphs
k=3CandidateSubgraphs
© Tan,Steinbach, Kumar Introduction to Data Mining 4/18/2004 60
Candidate Generation
In Apriori:– Merging two frequent k-itemsets will produce a
candidate (k+1)-itemset
In frequent subgraph mining (vertex/edge growing)– Merging two frequent k-subgraphs may produce more
than one candidate (k+1)-subgraph