Dr.Younes Ghasemi 1

Curriculum Vitae

Dr. Younes Ghasemi

Personal Information:

Younes Ghasemi, Pharm.D., Ph.D.

Professor at Department of Pharmaceutical Biotechnology

Vice-Chancellor for Research and Technology

Shiraz University of Medical Sciences, P.O. Box 71348-14336, Shiraz, Iran.

Telfax: +98-71-32122430

E-mail: ghasemiy@sums.ac.ir

Educations:

2012-2013: Visiting Academic Scholar in Industrial Biotechnology and Bioprocessing,

School of Chemical and Biomolecular Engineering, University of Sydney, Sydney,

Australia.

2002-2003: Fellowship in Molecular Biotechnology, School of Molecular & Microbial

Sciences, University of Queensland, Brisbane, Australia.

1997-2002: Ph. D, Department of Pharmaceutical Biotechnology, Faculty of Pharmacy,

Tehran University of Medical Sciences, Tehran, Iran.

1991-1997: Pharm D, School of Pharmacy, Shiraz University of Medical Sciences, Shiraz,

Iran.

Academic Position:

-Assistant Professor, School of Pharmacy, Shiraz University of Medical Sciences, 2003-

2007.

-Associate Professor, School of Pharmacy, Shiraz University of Medical Sciences, 2007-

2011.

-Professor, School of Pharmacy, Shiraz University of Medical Sciences, 2011-present.

Dr.Younes Ghasemi 2

Research interests:

-Recombinant Proteins

-In Silico Biotechnology

-Nanobiotechnology

-Bioprocess and Fermentation

-Microalgal Biotechnology

-Probiotics

Publications:

Articles:

1) Taghizadeh SM, Lal N, Ebrahiminezhad A, Moeini F, Seifan M, Ghasemi Y, Berenjian

A (2020). Green and economic fabrication of zinc oxide (ZnO) nanorods as a

broadband UV blocker and antimicrobial agent. Nanomaterials. Vol:10(3). 1-10.

2) Zarei M, Rahbar MR, Nezafat N, Negahdaripour M, Morowvat MH, Ghasemi Y*

(2020). Computational analysis of arginine deiminase sequences to provide a

guideline for protein engineering. Current Proteomics. Vol: 17(2), 132-146.

3) Borzouyan Dastjerdi M, Amini A, Nazari M, Cheng C, Benson V, Gholami A, Ghasemi

Y (2020). Novel versatile 3D bio-scaffold made of natural biocompatible hagfish

exudate for tissue growth and organoid modeling View Correspondence.

International Journal of Biological Macromolecules. Vol: 158, 894-902.

4) Vafadar A, Shabaninejad Z, Movahedpour A, Fallahi F, Taghavipour M, Ghasemi Y,

Akbari M, Shafiee A, Hajighadimi S, Moradizarmehri S, Razi E, Savardashtaki A,

Mirzaei H (2020). Quercetin and cancer: New insights into its therapeutic effects on

ovarian cancer cells. Cell and Bioscience. Vol :10(1).

5) Gholami A, Mohammadi F, Ghasemi Y, Omidifar N, Ebrahiminezhad A (2020).

Antibacterial activity of SPIONs versus ferrous and ferric ions under aerobic and

anaerobic conditions: A preliminary mechanism study. IET Nanobiotechnology.

Vol: 14 (2), 155-160.

6) Ranjbari S, Behzadi M, Sepehri S, Dadkhah Aseman M, Jarrahpour A, Mohkam M,

Ghasemi Y, Akbarizadeh AR, Kianpour S, Atioğlu Z, Özdemir N, Akkurt M,

Nabavizadeh MS, Turos, E (2020). Investigations of antiproliferative and

Dr.Younes Ghasemi 3

antioxidant activity of β-lactam morpholino-1,3,5-triazine hybrids. Bioorganic and

Medicinal Chemistry. Vol: 28(8).

7) Gholami A, Emadi F, Nazem M, Aghayi R, Khalvati B, Amini A, Ghasemi Y (2020).

Expression of key apoptotic genes in hepatocellular carcinoma cell line treated with

etoposide-loaded graphene oxide. Journal of Drug Delivery Science and

Technology Vol: 57.

8) Shahryari Z, Fazaelipoor MH, Shaabani MH, Ghasemi Y* (2020). Production of

fungal phytase in an innovative trickle bed bioreactor. Waste and Biomass

Valorization. Vol:11(7), 3273-3280.

9) Ghasemi Y, Ghoshoon M, Taheri M, Negahdaripour M, Nouri F (2020). Cloning,

expression and purification of human PDGF-BB gene in Escherichia coli: New

approach in PDGF-BB protein production. Gene Reports Vol: 19.

10) Mohkam M, Taleban Y, Golkar N, Berenjian A, Dehshahri A, Mobasher MA,

Ghasemi Y (2020). Isolation and identification of novel L-Methioninase

producing bacteria and optimization of its production by experimental design

method. Biocatalysis and Agricultural Biotechnology. Vol: 26.

11) Novin D, van der Wel J, Seifan M, Ebrahiminezhad A, Ghasemi Y, Berenjian A

(2020). A functional dairy product rich in Menaquinone-7 and FeOOH

nanoparticles. LWT Food Science and Technology. Vol: 129.

12) Atapour A, Negahdaripour M, Ghasemi Y, Razmjuee D, Savardashtaki A, Mousavi

SM, Hashemi SA, Aliabadi A, Nezafat N (2020). In silico designing a candidate

vaccine against breast cancer. International Journal of Peptide Research

and Therapeutics. Vol: 26(1), 369-380.

13) Safari F, Sharifi M, Farajnia S, Akbari B, Karimi Baba Ahmadi M, Negahdaripour

M, Ghasemi Y (2020). The interaction of phages and bacteria: the co-

evolutionary arms race. Critical Reviews in Biotechnology. Vol: 40(2), 119-

137.

14) Chahardahcherik M, Ashrafi M, Ghasemi Y, Aminlari M (2020). Effect of chemical

modification with carboxymethyl dextran on kinetic and structural properties of

L-asparaginase. Analytical Biochemistry. Vol: 591.

Dr.Younes Ghasemi 4

15) Mohkam M, Nezafat N, Berenjian A, Zamani M, Dabbagh F, Bigharaz R, Ghasemi

Y* (2020). Multifaceted toxin profile of Bacillus probiotic in newly isolated

Bacillus spp. from soil rhizosphere. Biologia. Vol: 75(2), 309-315.

16) Vakili B, Nezafat N, Zare B, Erfani N, Akbari M, Ghasemi Y*, Rahbar M, Hatam,

GR (2020). A new multi-epitope peptide vaccine induces immune responses and

protection against Leishmania infantum in BALB/c mice. Medical

Microbiology and Immunology. Vol: 209 (1), 69-79.

17) Vafadar A, Taheri-Anganeh M, Movahedpour A, Jamali Z, Irajie C, Ghasemi Y,

Savardashtaki A (2020). In Silico Design and Evaluation of scFv-CdtB as a

Novel Immunotoxin for Breast Cancer Treatment. International Journal of

Cancer Management.Vol: 13(1), 1-9.

18) Ebrahiminezhad A, Taghizadeh SM, Berenjian A, Ghasemi Y (2020).

Immobilization of Cells by Magnetic Nanoparticles. Methods in molecular

biology. 427-435.

19) Mortazavi M, Torkzadeh-Mahani M, Kargar F, Nezafat N , Ghasemi Y* (2020). In

silico analysis of codon usage and rare codon clusters in the halophilic bacteria

L-asparaginase. Biologia. Vol: 75, 151–160.

20) Taghizadeh SM ,Jafari S, Ahmad-Kiadaliri T, Mobasher MA, Lal N, Raee MJ,

Berenjian A, Ghasemi Y, Ebrahiminezhad A (2020). Magnetic immobilisation

as a promising approach against bacteriophage infection. Materials Research

Express. Vol: 6(12).

21) Gholami A, Mousavi SM, Hashemi SA, Ghasemi Y, Chiang WH, Parvin N (2020).

Current trends in chemical modifications of magnetic nanoparticles for targeted

drug delivery in cancer chemotherapy. Drug Metabolism Reviews. Vol: 52(1),

205-224.

22) Morowvat MH, Ghasemi Y (2020). Effects of sulfur starvation on growth rates,

biomass and lipid contents in the green microalga scenedesmus obliquus.

Recent Patents on Biotechnology. Vol: 14(2), 145-153.

23) Mahmoodi S, Nezafat N, Ghasemi Y (2020). Phage display as a bio-technique for

cancer immunotherapy. Letters in Drug Design and Discovery. Vol: 17(4),

377-385.

Dr.Younes Ghasemi 5

24) Khoshneviszadeh M, Zargarnezhad S, Ghasemi Y, Gholami A (2020). Evaluation of

surface-modified superparamagnetic iron oxide nanopar-ticles to optimize

bacterial immobilization for bio-separation with the least inhibitory effect on

microorganism activity. Nanoscience and Nanotechnology – Asia. Vol: 10(2),

166-174.

25) Taghizadeh SM, Zare-Hoseinabadi A, Berenjian A, Ghasemi Y, Ebrahiminezhad A

(2020). Effective parameters in the green synthesis of zero-valent iron

nanoparticles as a fenton-like catalyst. Journal of Environmental Treatment

Techniques. Vol: 8(1), 442-447.

26) Mohammadi A, Niazi A, Ara, F, Hassani F, Ghasemi Y (2020). Transformation of

the L-Asparaginase II Gene to Potato Hairy Roots for Production of

Recombinant Protein. Journal of Crop Science and Biotechnology. Vol: 23(1),

81-88.

27) Naeli P, Yousefi F, Ghasemi Y, Savardashtaki A, Mirzaei H (2020). The role of

microRNAs in lung cancer: Implications for diagnosis and therapy. Current

Molecular Medicine. Vol: 20(2), 90-101.

28) Mortazavi M, Torkzadeh-Mahani M, Kargar F, Nezafat N, Ghasemi, Y* (2020). In

silico analysis of codon usage and rare codon clusters in the halophilic bacteria

L-asparaginase. Biologia. Vol: 75(1), 151-160.

29) Zarei M, Rahbar MR, Negahdaripour M, Morowvat MH, Nezafat N, Ghasemi Y*

(2020). Cell penetrating peptide: Sequence-based computational prediction for

intercellular delivery of arginine deiminase. Current Proteomics. Vol: 17(2),

117-131.

30) Taheri-Anganeh M, Amiri A, Movahedpour A, Khatami SH, Ghasemi Y,

Savardashtaki A, Mostafavi-Pour Z (2020). In silico evaluation of PLAC1-flic as

a chimeric vaccine against breast cancer. Iranian Biomedical Journal. Vol:

24(3), 173-182.

31) Taghizadeh SM, Berenjian A, Chew KW, Show PL, Mohd Zaid HF, Ramezani H,

Ghasemi Y, Raee M, Ebrahiminezhad A (2020). Impact of magnetic

immobilization on the cell physiology of green unicellular algae Chlorella

vulgaris. Bioengineered. Vol: 11(1), 141-153.

Dr.Younes Ghasemi 6

32) Iraji, A, Yazdanpanah S, Alizadeh F, Mirzamohammadi S, Ghasemi Y, Pakshir K,

Yang Y, Zomorodian K (2020). Screening the antifungal activities of

monoterpenes and their isomers against Candida species. Journal of Applied

Microbiology. In press.

33) Kargar F, Savardashtaki A, Mortazavi M, Mahani MT, Amani AM, Ghasemi Y,

Nezafat N (2020). In silico study of 1, 4 alpha glucan branching enzyme and

substrate docking studies. Current Proteomics. Vol: 17(1), 40-50.

34) Negahdaripour M, Nezafat N, Heidari R, Erfani N, Hajighahramani N, Ghoshoon

MB, Shoolian E, Rahbar MR, Najafipour S, Dehshahri A, Morowvat MH,

Ghasemi Y* (2020). Production and preliminary in vivo evaluations of a novel

in silico-designed l2-based potential HPV vaccine. Current Pharmaceutical

Biotechnology. Vol: 21(4), 316-324.

35) Mortazavi M, Nezafat N, Negahdaripour M, Raee M, Torkzadeh-Mahani M, Riahi-

Madvar A, Ghasemi Y* (2020). In silico evaluation of substrate binding site and

rare codons in the structure of CYP152A1. Current Proteomics. Vol: 17(1), 10-

22.

36) Taghizadeh SM, Ebrahiminezhad A, Ghoshoon MB, Dehshahri A, Berenjian A,

Ghasemi, Y (2020). Magnetic immobilization of pichia pastoris cells for the

production of recombinant human serum albumin. Nanomaterials. Vol:10(1).

37) Mousavi P, Morowvat MH, Mostafavi-Pour Z, Aram F, Malekzadeh K, Nezafat N,

Ghasemi Y (2020). Experimental Analysis of E2BB (LTIIb) Signal Peptide in

Secretory Production of Reteplase in Escherichia coli. International Journal of

Peptide Research and Therapeutics.

38) Kianpour S, Ebrahiminezhad A, Heidari A, Khalvati B, Shahbazi M, Negahdaripour

M, Mohkam M, Aghaei R,Berenjian A, Niknejad V, Ghasemi Younes (2020).

Enterobacter sp. Mediated Synthesis of Biocompatible Nanostructured Iron-

Polysaccharide Complexes: a Nutritional Supplement for Iron-Deficiency

Anemia. Biological Trace Element Research. In press.

39) Ranjbari S, Behzadi M, Sepehri S, Dadkhah Aseman M, Jarrahpour A, Mohkam M,

Ghasemi Y, Akbarizadeh A, Kianpour S, Atioğlu Z, Özdemir N, Akkurt M ,

Nabavizadeh M, Turos E (2020). Investigations of Antiproliferative and

Antioxidant Activity of β-Lactam Morpholino-1,3,5-Triazine Hybrids.

Bioorganic & Medicinal Chemistry.Vol: 28 (8), 1-14.

Dr.Younes Ghasemi 7

40) Dorosti H, Eslami M, Nezafat N, Fadaei F, Ghasemi Y* (2019). Designing self-

assembled peptide nanovaccine against Streptococcus pneumoniae: An in silico

strategy. Molecular and Cellular Probes. Vol: 48. 1-12.

41) Hajighahramani N, Eslami M, Negahdaripour M, Ghoshoon MB, Dehshahri A, Erfani

N, Heidari R, Gholami A, Nezafat N, Ghasemi Y* (2019). Computational design

of a chimeric epitope-based vaccine to protect against Staphylococcus aureus

infections. Molecular and Cellular Probes. Vol: 46. 1-12.

42) Mehraban MH, Motovali-Bashi M, Ghasemi Y (2019). MiR-26a and miR-26b

downregulate the expression of sucrase-isomaltase enzyme: A new chapter in

diabetes treatment. Biochemical and Biophysical Research Communications.

Vol: 519(1), 192-197.

43) Bazmandeh AZ, Mirzaei E, Ghasemi Y, Kouhbanani MAJ (2019). Hyaluronic acid

coated electrospun chitosan-based nanofibers prepared by simultaneous

stabilizing and coating. International Journal of Biological Macromolecules.

Vol: 138, 403-411.

44) Mehraban MH, Mansourian M, Ahrari S, HajiEbrahimi A, Odooli S. Motovali-Bashi

M, Yousefi R, Ghasemi Y* (2019). Maltase-glucoamylase inhibition potency and

cytotoxicity of pyrimidine-fused compounds: An in silico and in vitro approach.

Computational Biology and Chemistry. Vol: 82, 25-36.

45) Borazjani N, Sepehri S, Behzadi M, Jarrahpour A, Rad JA, Sasanipour M, Mohkam

M, Ghasemi Y, Akbarizadeh R, Digiorgio C, Brunel JM, Ghanbari MM, Batta G,

Turos E (2019). Three-component synthesis of chromeno β-lactam hybrids for

inflammation and cancer screening. European Journal of Medicinal Chemistry.

Vol: 179, 389-403.

46) Shabaninejad Z, Yousefi F, Movahedpour A, Ghasemi Y, Dokanehiifard S ,RezaeiS,

Aryan R, Savardashtaki A, Mirzaei H (2019). Electrochemical-based biosensors

for microRNA detection: Nanotechnology comes into view. Analytical

Biochemistry. Vol: 581:113349.

47) Ahrari S, Khosravi F, Osouli A, Sakhteman A, Nematollahi A, Ghasemi Y,

Savardashtaki A (2019). MARK4 protein can explore the active-like

Dr.Younes Ghasemi 8

conformations in its non-phosphorylated state. Scientific reports . Vol: 9(1),

12967.

48) Shabaninejad Z, Vafadar A, Movahedpour A, Ghasemi Y, Namdar A, Fathizadeh H,

Pourhanifeh MH, Savardashtaki A, Mirzaei H (2019). Circular RNAs in cancer:

New insights into functions and implications in ovarian cancer (Review). Journal

of Ovarian Research.Vol: 12(1), 1-12.

49) Kheshtzar R, Berenjian A, Ganji N, Taghizadeh SM , Maleki M, Taghizadeh S,

Ghasemi Y, Ebrahiminezhad A (2019). Response surface methodology and

reaction optimization to product zero-valent iron nanoparticles for organic

pollutant remediation. Biocatalysis and Agricultural Biotechnology. Vol: 21, 1-

8.

50) Ebrahimi N, Nezafat N, Esmaeilzadeh H, Ghasemi Y, Nabavizadeh, SH, Alyasin S

(2019). In silico prediction of B-cell epitopes for twenty-five mite allergens: The

therapeutic potentials for immunotherapy. Molecular and Cellular Probes. Vol:

46, 1-8.

51) Safari F, Zare K, Negahdaripour M, Barekati-Mowahed M, Ghasemi Y (2019).

CRISPR Cpf1 proteins: Structure, function and implications for genome editing.

(review). Cell and Bioscience.Vol: 9(1), 1-21.

52) Arvin A, Hosseini M, Amin MM, Najafpour Darzi G, Ghasemi Y (2019). Efficient

methane production from petrochemical wastewater in a single membrane-less

microbial electrolysis cell: The effect of the operational parameters in batch and

continuous mode on bioenergy recovery. Journal of Environmental Health

Science and Engineering. Vol: 17(1), 305-317.

53) Kheshtzar R, Berenjian A, Taghizadeh SM, Ghasemi Y, Asad AG, Ebrahiminezhad A

(2019). Optimization of reaction parameters for the green synthesis of zero valent

iron nanoparticles using pine tree needles. Green Processing and Synthesis. Vol:

8(1), 846-855.

54) Mousavi SM, Hashemi SA, Ghasemi Y, Amani AM, Babapoor A, Arjmand O (2019).

Applications of graphene oxide in case of nanomedicines and nanocarriers for

biomolecules: review study. Drug Metabolism Reviews. Vol: 51(1), 12-41.

Dr.Younes Ghasemi 9

55) Mousavi SM, Soroshnia S, Hashemi A, Babapoor A, Ghasemi Y, Savardashtaki A,

Amani AM (2019). Graphene nano-ribbon based high potential and efficiency for

DNA, cancer therapy and drug delivery applications. Drug Metabolism Reviews.

Vol: 51(1), 91-104.

56) Javdani N, Rahpeyma Sh, Ghasemi Y, Raheb J (2019). Effect of superparamagnetic

nanoparticles coated with various electric charges on α-synuclein and β-amyloid

proteins fibrillation process. International Journal of Nanomedicine. Vol: 14,

6733-6734.

57) Niknezhad V, Najafpour Gh, Kianpour S, Jafarzadeh S, Mohammadi H, Ghasemi Y,

Heidari R, Shahbazi MA (2019). Bacteria assisted biogreen synthesis of radical

scavenging exopolysaccharide-Iron complex: An oral nano-sized nutritional

supplement with high in vivo compatibility. Journal of Materials Chemistry.

Vol: 14;7(34), 5211-5221.

58) Zamani M, Eslami M, Nezafat N, Hosseini SV, Ghasemi Y* (2019). Evaluating the

effect of BDNF Val66Met polymorphism on complex formation with HAP1 and

Sortilin1 via structural modeling. Computational Biology and Chemistry. Vol:

78, 282-289.

59) Taghizadeh M, Berenjian A, Taghizadeh S, Ghasemi Y, Taherpour A, Sarmah A. K,

Ebrahiminezhad A (2019). One-put green synthesis of multifunctional silver iron

core-shell nanostructure with antimicrobial and catalytic properties. Industrial

Crops & Products. Vol: 130, 230–236.

60) Mohammadi F, Nezafat N, Berenjian A, Negahdaripour M, Zamani M, Ghoshoon

MB, Morowvat MH, Hemmati S, Ghasemi Y (2019). Extracellular production

of a potent and chemical resistant nattokinase in immobilized Escherichia coli

using response surface methodology. Current Pharmaceutical Biotechnology.

Vol:19(11), 856-868.

61) Rahbar MR, Zarei M, Jahangiri A, Khalili S, Nezafat N, Negahdaripour M, Fattahian

Y, Ghasemi Y* (2019). Trimeric autotransporter adhesins in Acinetobacter

baumannii, coincidental evolution at work. Infection, Genetics and Evolution.

Vol: 25(71), 116–127.

62) Asadi M, Taheri M, Jamali Z, Khatami H, Irajie c, Savardashtaki A. Ghasemi Y

(2019). In silico analysis of signal peptides for secretory production of a-amylase

Dr.Younes Ghasemi 10

in Bacillus subtilis. Asia-Pacific Journal of Molecular Biology and

Biotechnology. Vol: 27 (3), 113-124.

63) Taheri-Anganeh M, Khatami H, Jamali Z, Savardashtaki A, Ghasemi Y,

Mostafavipour Z (2019). In silico analysis of suitable signal peptides for

secretion of a recombinant alcohol dehydrogenase with a key role in atorvastatin

enzymatic synthesis. Molecular Biology Research Communications. Vol: 8(1),

17-26.

64) Zarei M, Nezafat N, Rahbar MR, Negahdaripour M, Sabetian S, Morowvat MH,

Ghasemi Y* (2019). Decreasing the immunogenicity of arginine deiminase

enzyme via structure‐based computational analysis. Journal of Biomolecular

Structure and Dynamics. Vol: 37(2), 523-536.

65) Javdani N, Rahpayma Sh, Ghasemi Y, Raheb J (2019). Effect of superparamagnetic

nanoparticles coated with various electric charges on α-synuclein and β-amyloid

proteins fibrillation process. International Journal of Nanomedicine.Vol: 14,

799-808.

66) Zarei M, Rahbar MR, Morowvat MH, Nezafat N, Negahdaripour M, Berenjian

A, Ghasemi Y* (2019). Arginine deiminase: current understanding and

applications. Recent Patent on Biotechnology. Vol: 13(2),124-136.

67) Eslami M, Nezafat N, Khajeh S, Mostafavi-pour Z, Bagheri Novir S, Negahdaripour

M, Ghasemi Y*, Razban V (2019). Deep analysis of N-cadherin/ADH-1

interaction: a computational survey. Journal of Biomolecular Structure and

Dynamics. Vol: 37(1), 210-228.

68) Arvin A ,Hosseini, M, Amin MM , Najafpour Darzi G, Ghasemi Y (2019). A

comparative study of the anaerobic baffled reactor and an integrated anaerobic

baffled reactor and microbial electrolysis cell for treatment of petrochemical

wastewater. Biochemical Engineering Journal. Vol: 144, 157-165.

69) Mosaddeghi P, Nezafat N, Negahdaripour M, Eslami M, Ghasemi Y* (2019).

Targeting negative regulators of TRIF-dependent TLR signaling pathway as a

novel therapeutic strategy. Current Signal Transduction Therapy. Vol: 14(1),

1-7.

Dr.Younes Ghasemi 11

70) Borazjani N, Jarrahpour A, Rad JA ,Mohkam M, Behzadi M ,Ghasemi Y, Mirzaeinia

S, Karbalaei-Heidari HR, Ghanbari MM ,Batta G ,Turos E (2019). Design,

synthesis and biological evaluation of some novel diastereoselective β-lactams

bearing 2-mercaptobenzothiazole and benzoquinoline. Medicinal Chemistry

Research. Vol: 28(3): 15, 329-339.

71) Taghizadeh S, Alimardani V, Roudbali PL, Ghasemi Y (2019). Gold nanoparticles

application in liver cancer. Photodiagnosis and Photodynamic Therapy. Vol:

25, 389-400.

72) Rahmatabadi SS, Sadeghian I, Ghasemi Y, Sakhteman A, Hemmati S (2019).

Identification and characterization of a sterically robust phenylalanine ammonia-

lyase among 481 natural isoforms through association of in silico and in vitro

studies. Enzyme and Microbial Technology. Vol: 122, 36-54.

73) Kargar F, Mortazavi M, Savardashtaki A, Hosseinkhani S, Mahan, MT, Ghasemi Y

(2019). Genomic and protein structure analysis of the luciferase from the Iranian

bioluminescent beetle, Calopteron terminale. International Journal of

Biological Macromolecules .Vol: 124, 689-698.

74) Davani-Davari D, Negahdaripour M, Karimzadeh I, Seifan M, Mohkam M, Masoumi

SJ, Berenjian A, Ghasemi Y (2019). Prebiotics: Definition, types, sources,

mechanisms, and clinical applications. Foods. Vol: 8(3), 1-27.

75) Ebrahiminezhad A, Moeeni F, Taghizadeh SM, Seifan M, Bautista C, Novin D,

Ghasemi Y, Berenjian A (2019). Xanthan gum capped ZnO microstars as a

promising dietary zinc supplementation. Foods. Vol: 8(3), 1-10.

76) Shahryari Z, Fazaelipoor MH, Ghasemi Y, Lennartsson PR, Taherzadeh MJ (2019).

Amylase and xylanase from edible fungus neurospora intermedia: production and

characterization. Molecules. Vol: 24(4), 1-14.

77) Mohammadi M, Mowla D, Esmaeilzadeh F, Ghasemi Y (2019). Enhancement of

sulfate removal from the power plant wastewater using cultivation of indigenous

microalgae: Stage-wise operation. Journal of Environmental Chemical

Engineering. Vol: 7(1), 1-7.

Dr.Younes Ghasemi 12

78) Seifan M, Ebrahiminezhad A, Ghasemi Y, Berenjian A (2019). Microbial calcium

carbonate precipitation with high affinity to fill the concrete pore space:

nanobiotechnological approach. Bioprocess and Biosystems Engineering. Vol:

42(1), 37-46.

79) Baghban R, Farajnia S, Rajabibazl M, Ghasemi Y, Mafi AA, Hoseinpoor R,

Rahbarnia L , Aria M (2019). Yeast expression systems: overview and recent

advances. Molecular Biotechnology. Vol: 61(5) , 365–384.

80) Lohrasbi S, Jadidi Kouhbanani MA, Beheshtkhoo N, Ghasemi Y, Amani AM,

Taghizadeh S (2019). Green synthesis of iron nanoparticles using plantago major

leaf extract and their application as a catalyst for the decolorization of azo dye.

BioNanoScience. Vol: 9(2) , 317–322.

81) Dorosti H, Eslami M, Negahdaripour M, Ghoshoon MB, Gholami A, Heidari R,

Dehshahri A , Erfani N, Nezafat N, Ghasemi Y* (2019). Vaccinomics approach

for developing multi-epitope peptide pneumococcal vaccine. Journal of

Biomolecular Structure and Dynamics. Vol: 37(13), 3524-3535.

82) Eslami M, Nezafat N, Negahdaripour M, Ghasemi Y* (2019). Computational approach

to suggest a new multi-target-directed ligand as a potential medication for

Alzheimer’s disease. Journal of biomolecular Structure & Dynamics. Vol:

37(18), 4825-4839.

83) Zarei M, Nezafat N, Morowvat MH, Ektefaie M, Ghasemi Y* (2019). In silico analysis

of different signal peptides for secretory production of arginine deiminase in

Escherichia coli. Recent Patents on Biotechnology. Vol: 13(3), 217-227.

84) Kianpour S, Ebrahiminezhad A, Deyhimi M, Negahdaripour M, Raee M J, Mohkam

M, Rezaee H, Irajie C, Berenjian A (2019). Structural characterization of

polysaccharide-coated iron oxide nanoparticles produced by Staphylococcus

warneri, isolated from a thermal spring. Journal of Basic Microbiology. Vol:

59(6), 569-578.

85) Sabetian S, Nezafat N, Dorosti H, Zarei M, Ghasemi Y* (2019). Exploring dengue

proteome to design an effective epitope-based vaccine against dengue virus.

Journal of Biomolecular Structure and Dynamics. Vol: 37(10), 2546-2563.

Dr.Younes Ghasemi 13

86) Safari F, Zare K, Negahdaripour M, Barekati-Mowahed M, Ghasemi, Y* (2019).

CRISPR Cpf1 proteins: Structure, function and implications for genome editing.

Cell and Bioscience. Vol: 9(36).

87) Rahbar MR, Zarei M, Jahangiri A, Khalili S, Nezafat N, Negahdaripour M, Fattahian

Y, Ghasemi Y* (2019). Pierce into the native structure of Ata, a trimeric

autotransporter of acinetobacter baumannii ATCC 17978. International Journal

of Peptide Research and Therapeutics. (https://doi.org/10.1007/s10989-019-

09920-5).

88) Negahdaripour M, Owji H, Eslami M, Zamani M,Vakili B, Sabetian S, Nezafat N,

Ghasemi Y* (2019) Selected application of peptide molecules as pharmaceutical

agents and in cosmeceuticals. Expert Opinion on Biological Therapy. Vol:

19(12), 1275-1287.

89) Gholami A, Mohammadi F, Ghasemi Y, Omidifar N, Ebrahiminezhad (2019).

Antibacterial activity of superparamagnetic iron oxide nanoparticles versus

ferrous and ferric ions under aerobic and anaerobic conditions: A preliminary

mechanism study. IET Nanobiotechnology. Vol: 14(2):155 – 160.

90) Rahbar MR, Zarei M, Nezafat N, Negahdaripour M, Ghasemi Y* (2019). Repeat

containing proteins in the Acinetobacter baumannii proteome. Current Chemical

Biology. Vol: 13(2).

91) Akbarian M, Ghasemi Y, Uversky VN, Yousefi R (2018). Chemical modifications of

insulin: Finding a compromise between stability and pharmaceutical performance.

International Journal of Pharmaceutics. Vol: 25(547), 450-468.

92) Ghorbani A, Rahimpour MR, Ghasemi Y, Raeissi S (2018). Experimental

Investigation on the Integration of Raceway Pond and Airlift Pump for

Microalgal Cultivation. International Journal of Renewable Energy Research.

Vol : 8(3).

93) Emadi F, Amini A, Ghasemi Y, Gholami A (2018). Graphene: recent advances in

engineering, medical and biological sciences, and future prospective. Trends in

Pharmaceutical Sciences. Vol: 4(3), 131-138.

Dr.Younes Ghasemi 14

94) Morowvat MH, Ghasemi Y (2018). Maximizing Biomass and Lipid Production in

Heterotrophic Culture of Chlorella vulgaris: Techno-Economic Assessment.

Journal Recent patents on food, nutrition & agriculture.

95) Mohammadi F, Nezafat N, Negahdaripour M, Dabbagh F, Haghghi A, Kianpour S,

Banihashemi M, Ghasemi Y (2018). Neuroprotective Effects of Heat Shock

Protein70. CNS & Neurological Disorders-Drug Targets Vol: 17(10), 736-742.

96) Amani AM, Motaghedifard MH,Honarmand E, Motmaen M, Ghasemi Y,

Savardashtaki A, Monfared A (2018). Sensitive measurement of trace amounts of

promethazine hydrochloride at MWCNT-COOH nanostructures modified pencil

graphite electrode based on charge transfer complex formation. Indian Journal

of Chemistry. Vol: 57. 770-777.

97) Gholami A, Ebrahiminezhad A, Abootalebi N, Ghasemi Y (2018). Synergistic

evaluation of functionalized magnetic nanoparticles and antibiotics against

Staphylococcus aureus and Escherichia coli. Pharmaceutical Nanotechnology

Vol: 6(1), 1-10.

98) Mousavi SM, Hashemi SA, Ghasemi Y, Atapour A, Amani AM, Savar Dashtaki

A, Babapoor A, Arjmand O (2018). Green synthesis of silver nanoparticles

toward bio and medical applications: review study. Artificial Cells,

Nanomedicine and Biotechnology. Vol: 46(sup3): S855-S872.

99) Shokri D, Rabbani Khorasgani M, Mohkam M, Fatemi M, Ghasemi Y, Taheri-

Kafrani A (2018). The inhibition effect of lactobacilli against growth and

biofilm formation of Pseudomonas aeruginosa. Probiotics and Antimicrobial

Proteins. Vol: 10(1), 34-42.

100) Niknezhad SV, Najafpour-Darzi G, Morowvat MH, Ghasemi Y* (2018).

Eexopolysaccharide production of Pantoea sp. BCCS 001 GH: Physical

characterizations, emulsification, and antioxidant activities. International Journal

of Biological Macromolecules. Vol: 15(118), 1103-1111.

101) Mousavi, SM, Hashemi SA, Amani AM, Esmaeili H, Ghasemi Y, Babapoor A,

Mojoudi F, Arjomand O (2018). Pb(II) removal from synthetic wastewater using

Kombucha Scoby and graphene oxide/Fe34. Physical Chemistry Research. Vol:

6(4), 759-771.

Dr.Younes Ghasemi 15

102) Mohammadi SH, Mostafavi-Pour Z, Ghasemi Y, Barazesh M, Kavousi Pour S,

Atapour A, Mokarram , Morowvat MH (2018). In silico Analysis of Different

Signal Peptides for the Excretory Production of Recombinant NS3-GP96 Fusion

Protein in Escherichia coli. International Journal of Peptide Research and

Therapeutics.

103) Javdani N, Rahpayma Sh, Ghasemi Y, Raheb J (2018). Dataset on the relation of

synthetic super para magnetic nanoparticles coated with various electric charges

and fibrillation of albumin protein. Data in Brief. Vol: 21, 1853-1857.

104) Negahdaripour M, Nezafat N, Eslami M, Ghoshoon MB, Shoolian E, Najafipour S,

Morowvat MH, Dehshahri A, Erfani N, Ghasemi Y* (2018). Structural

vaccinology considerations for in silico designing of a multiepitope vaccine.

Infection, Genetics and Evolution. Vol: 58, 96-109.

105) Vakili B, Nezafat N, Hatam GR, Zare B, Erfani N, Ghasemi Y* (2018). Proteome-

scale identification of Leishmania infantum for novel vaccine candidates: A

hierarchical subtractive approach. Computational Biology and Chemistry.

Vol: 72, 16–25.

106) Ebrahiminezhad A, Zare‑Hoseinabad A, Sarmah AK, Taghizadeh S, Ghasemi Y,

Berenjian A (2018). Plant‑Mediated synthesis and applications of iron

nanoparticles. Molecular Biotechnology. Vol: 60(2), 154-168.

107) Siavashpour A , Ghasemi Y, Khalvati B , Jeivad F , Azarpira N, Niknahad H

(2018). Diazinon interrupts ovarian steroidogenic acute regulatory (StAR) gene

transcription in gonadotropin-stimulated rat model. Iranian Journal of

Pharmaceutical Research. Vol: 17(2), 535-542.

108) Baghban R, Farajnia S, Ghasemi Y , Mortazavi M , Zarghami N, Samadi N (2018).

New developments in Pichia pastoris expression system, review and update.

Current Pharmaceutical Biotechnolog. Vol: 19, 451-467.

109) Seifan M, Sarmah AK, Ebrahiminezhad A, Ghasemi Y, Khajeh Samani A,

Berenjian A (2018). Bio-reinforced self-healing concrete using magnetic iron

oxide nanoparticles. Applied Microbiology and Biotechnology. Vol: 102(5),

2167–2178.

110) Sajadian SF, Morowvat MH, Ghasemi Y (2018). Investigation of autotrophic,

heterotrophic, and mixotrophic modes of cultivation on lipid and biomass

Dr.Younes Ghasemi 16

production in Chlorella vulgaris. National Journal of Physiology, Pharmacy

and Pharmacology. Vol: 8 (4), 1-6.

111) Seifan M, Ebrahiminezhad A, Ghasemi Y, Khajeh Samani A, Berenjian A (2018).

Amine-modified magnetic iron oxide nanoparticle as a promising carrier for

application in bio self-healing concrete. Applied Microbiology and

Biotechnology. Vol: 102(1), 175-184.

112) Ebrahiminezhad A, Zare M, Kiyanpour S, Berenjian A, Niknezhad SV, Ghasemi

Y* (2018). Biosynthesis of xanthangum-coated INPs by usingXanthomonas

campestris. IET Nanobiotechnology. Vol: 12(3), 254 – 258.

113) Ranmadugala D, Ebrahiminezhad A, Manley-Harris M, Ghasemi Y, Berenjian A

(2018). Magnetic immobilization of bacteria using iron oxide nanoparticles.

Biotechnology Letters. Vol: 40(2), 237-248.

114) Akbariana M , Ghasemi Y, Uversky VN, Yousefi R (2018). Chemical modifications

of insulin: Finding a compromise between stability and pharmaceutical

performance. International Journal of Pharmaceutics. Vol: 547, 450–468.

115) Sadeghian I, Khalvati B, Ghasemi Y, Hemmati SH (2018). TAT-mediated

intracellular delivery of carboxypeptidase G2 protects against methotrexate-

induced cell death in HepG2 cells. Toxicology and Applied Pharmacology.

Vol: 346, 9-18.

116) Seifan M, Ebrahiminezhad A, Ghasemi Y, Khajeh Samani A, Berenjian A (2018).

The role of magnetic iron oxide nanoparticles in the bacterially induced calcium

carbonate precipitation. Applied Microbiology and Biotechnology. Vol:

102(8). 3595-3606.

117) Mohammadi M, Mowla D, Esmaeilzadeh F, Ghasemi Y (2018). Cultivation of

microalgae in a power plant wastewater for sulfate removal and biomass

production: A batch study. Journal of Environmental Chemical Engineering.

Vol : 6(2), 2812-2820.

Dr.Younes Ghasemi 17

118) Ghorbani A, Rahimpour MR, Ghasemi Y, Raeissi S (2018). The Biodiesel of

Microalgae as a Solution for Diesel Demand in Iran. Energies. Vol: 11(4), 950.

119) Ranmadugala D, Ebrahiminezhad A, Manley-Harris M, Ghasemi Y, Berenjian A

(2018). High level of menaquinone-7 by milking with biocompatible organic

solvents. Current Pharmaceutical Biotechnology. Vol: 19(3), 232-239.

120) Niknezhad V, Najafpour-Darzi Gh, Morowvat MH, Ghasemi Y* (2018).

Eexopolysaccharide production of Pantoea sp. BCCS 001 GH: Physical

characterizations, emulsification, and antioxidant activities .International

Journal of Biological Macromolecules. Vol: 118, 1103-1111.

121) Zarrini G, Rahmani R, Negahdaripour M, Mohkam M, Ghasemi Y (2018). Isolation

and identification of culturable aerobic halophilic archaea associated with salt

crystals from Urmia Lake. Trends in Pharmaceutical Sciences. Vol: 4(2), 109-

112.

122) Ebrahiminezhad A, Taghizadeh S, Ghasemi Y, Berenjian A (2018). Green

synthesized nanoclusters of ultra-small zero valent iron nanoparticles as a novel

dye removing material. Science of the Total Environment. Vol: 15(621),

1527-1532.

123) Raee MJ, Ebrahiminezhad A, Gholami A, Ghoshoon MB, Ghasemi Y* (2018).

Magnetic immobilization of recombinant E. coli producing extracellular

asparaginase: An effective way to intensify downstream process. Separation

Science and Technology.Vol: 53(9), 1397–1404.

124) Morowvat MH, Ghasemi Y (2018). Studying the Effects of Different Phosphorous

Concentrations on Biomass and β-carotene Production in Nitrogen Starved

Dunaliella salina. Research Journal of Pharmacy and Technology. Vol:

11(2), 494-498.

125) Jalali S, Zarrinhaghighi A, Sadraei S, Ghasemi Y, Sakhteman A, Faridi P (2018). A

System Pharmacology Study for Deciphering Anti Depression Activity of

Nardostachys jatamansi. Current drug metabolism.Vol:19(5), 469-476.

Dr.Younes Ghasemi 18

126) Mohammadi M, Mowla D, Esmaeilzadeh F, Ghasemi Y (2018). The effect of power

plant wastewater concentration on microalgae performance to remove sulfate

pollutant: A batch study. Biointerface Research In Applied Chemistry. Vol:

8(2), 3126-3129.

127) Sazegari S, Niazi A, Shahriari-Ahmadi F, Moshtaghi N, Ghasemi Y (2018).

'CrMYC1'transcription factor overexpression promotes the production of low

abundance terpenoid indole alkaloids in'Catharanthus roseus. Plant Omics. Vol:

11(01), 30-36.

128) Jafari SH, Mobasher MA, Najafipour S, Ghasemi Y, Mohkam M, Ebrahimi MA,

Mobasher N (2018). Antibacterial Potential of Chlorella vulgaris and Dunaliella

salina Extracts Against Streptococcus Mutans. Jundishapur Journal of

Natural Pharmaceutical Products. Vol: 13(2), 1-7.

129) Odooli S, Khalvati B, Safari A, Mehraban MH, Kargar M, Ghasemi Y* (2018).

Comparison of tuf gene-based qPCR assay and selective plate count for

Bifidobacterium 1 animalis subsp. lactis BB-12 quantification in commercial

probiotic yogurts. International Food Research Journal. Vol: 25(4), 1708-

1719.

130) Morowvat MH, Ghasemi Y (2018). Cell Growth, Lipid Production and Productivity

in Photosynthetic Microalga Chlorella vulgaris under Different Nitrogen

Concentrations and Culture Media Replacem. Recent patents on food,

nutrition & agriculture. Vol: 9(2), 1-10.

131) Vakili B, Eslami M, Hatam GH, Zare B, Erfani N, Nezafat N, Ghasemi Y*(2018).

Immunoinformatics-aided design of a potential multi-epitope peptide vaccine

against Leishmania Infantum. International Journal of Biological

Macromolecules. Vol: 120, 1127–1139.

132) Owji H, Nezafat N, Negahdaripour M, Hajiebrahimi A, Ghasem Y*(2018). A

comprehensive review of signal peptides: Structure, roles, and applications.

European Journal of Cell Biology. Vol: 97, 422–441.

Dr.Younes Ghasemi 19

133) Seifan M, Sarmah AK, Samani AK, Ebrahiminezhad A, Ghasemi Y, Berenjian A

(2018). Mechanical properties of bio self-healing concrete containing

immobilized bacteria with iron oxide nanoparticles. Applied Microbiology and

Biotechnology. Vol: 102(10), 4489–4498.

134) Niknezhad V, Morowvat MH, Najafpour Darzi GH, Iraji A, Ghasemi Y* (2018).

Exopolysaccharide from Pantoea sp. BCCS 001 GH isolated from nectarine

fruit: production in submerged culture and preliminary physicochemical

characterizations. Food Science and Biotechnology. Vol: 27 (6),1735-1746.

135) Kianpour S, Ebrahiminezhad A, Negahdaripour M, Mohkam M, Mohammadi F,

Niknezhad V, Ghasemi Y* (2018). Characterization of biogenic Fe (III) ‐binding

exopolysaccharide nanoparticles produced by Ralstonia sp. SK03.

Biotechnology Progress. Vol: 34(5),1167-1176.

136) Mohkam M, Roshanfard F, Nezafat N, Gholami A, Ghasemi Y* (2018). Y G.

Medium optimization, characterization and in-vitro evaluation of probiotic

properties of Lactobacillus reuteri PTCC 1655 for supplementary purpose.

Journal of Applied Pharmaceutical Science.

137) Ghavidel F, Zarshenas MM, Sakhteman A, Gholami A, Ghasemi Y, Faridi P (2018).

The effect of different extraction methods on chemical composition profile and

pharmacological activities of essential oils and hydrosols. Planta Medica.

138) Montazeri-Najafabady N, Ghasemi Y, Dabbaghmanesh MH, Talezadeh P,

Koohpeyma F, Gholami A (2018). Supportive role of probiotic strains in

protecting rats from ovariectomy-iInduced cortical bone loss. Probiotics and

Antimicrobial Proteins. 1-10.

139) Atapour A, Mokarram P, MostafaviPour Z, Hosseini Y, Ghasemi Y, Mohammadi

SH, Nezafat N (2018). Designing a fusion protein vaccine against HCV: An in

silico approach. International Journal of Peptide Research and

Therapeutics. Vol: 25(3), 861-872.

140) Shahryari Z, Fazaelipoor MH, Setoodeh P, Nair RB, Taherzadeh MJ, Ghasemi Y

(2018). Utilization of wheat straw for fungal phytase production. International

Journal of Recycling of Organic Waste in Agriculture. Vol: 7(4), 345-355.

Dr.Younes Ghasemi 20

141) Zarei M, Nezafat N, Morowvat MH, Dehshahri A, Ghoshoon MB, Berenjian A,

Ghasemi Y* (2017). Medium optimization for recombinant soluble arginine

deiminase expression in Escherichia coli using response surface methodology.

Current Pharmaceutical Biotechnology. Vol: 18(11), 935-941.

142) Taghizadeh S-M, Ghasemi Y, Ebrahiminezhad A (2017). Chemical and biological

approaches for the synthesis of iron based nanoparticles. Trends in

Pharmaceutical Sciences. Vol: 3(4), 237-44.

143) Ebrahiminezhad A, Zare-Hoseinabadi A, Berenjian A, Ghasemi Y (2017). Green

synthesis and characterization of zero-valent iron nanoparticles using stinging

nettle (Urtica dioica) leaf extract. Green Processing and Synthesis. Vol: 6(5),

469-75.

144) Ranmadugala D, Ebrahiminezhad A, Manley-Harris M, Ghasemi Y, Berenjian A

(2017). Reduced biofilm formation in Menaquinone-7 production process by

optimizing the composition of the cultivation medium. Trends in

Pharmaceutical Sciences.Vol: 3(4), 245-254.

145) Morowvat MH, Ghasemi Y (2017). Cell Growth, Lipid Production and Productivity

in Photosynthetic Microalga Chlorella vulgaris under Different Nitrogen

Concentrations and Culture Media Replacement. Recent Patents on Food,

Nutrition & Agriculture. Vol: 9(2), 1-10.

146) Zarei M, Nezafat N, Morowvat MH, Dehshahri A, Ghoshoon MB, Berenjian A,

Ghasemi Y* (2017). Medium optimization for recombinant soluble arginine

deiminase expression in escherichia coli using response surface methodology.

Current Pharmaceutical Biotechnology. Vol: 18(11), 935-41.

147) Gholami A, Abootalebi N, Nazem M, Shirkosh EH, Ghasemi Y* (2017). A new cost-

effective method to evaluate collagenase activity using nano-graphene oxide.

Trends in Pharmaceutical Sciences. Vol: 3(4), 287-292.

Dr.Younes Ghasemi 21

148) Abbaszadegan A, Gholami A, Abbaszadegan S, Aleyasin ZS, Ghahramani Y,

Dorostkar S, Hemmateenejad B, Ghasemi Y, Sharghi H (2017). The Effects of

Different Ionic Liquid Coatings and the Length of Alkyl Chain on

Antimicrobial and Cytotoxic Properties of Silver Nanoparticles. Iranian

Endodontic Journal Vol: 12(4), 481-487.

149) Vakili B, Nezafat N, Negahdaripour M, Yari M, Zare B, Ghasemi Y* (2017).

Staphylokinase enzyme: an overview of structure, function and engineered

forms. Current Pharmaceutical Biotechnology. Vol: 18(13), 1026-1037.

150) Negahdaripour M, Golkar N, Hajighahramani N, Kianpour S, Nezafat N, Ghasemi

Y* (2017). Harnessing self-Assembled peptide nanoparticles in epitope vaccine

design. Biotechnology Advances. Vol: 35(5), 575–596.

151) Safari F, Farajnia S, Ghasemi Y, Zarghami N (2017). New Developments in

CRISPR Technology: Improvements in Specificity and Efficiency. Current

Pharmaceutical Biotechnology. Vol: 18(13), 1038-1054.

152) Emadi F, Amini A, Gholami A, Ghasemi Y* (2017). Functionalized graphene oxide

with chitosan for protein nanocarriers to protect against enzymatic cleavage and

retain the collagenase activity. Scientific Reports. Vol: 7, 1-13.

153) Ebrahiminezhad A, Taghizadeh S, Ghasemi Y* (2017). Green synthesis of silver

nanoparticles using mediterranean cypress (Cupressus sempervirens) leaf

extract. American Journal of Biochemistry and Biotechnology. Vol: 13(1), 1-

6.

154) Adibi M, Mobasher N, Ghasemi Y, Mohkam M, Jokar J, Mobasher MA (2017).

Isolation, purification and identification of E.coli O157 phage for medical

purposes. Trends in Pharmaceutical Sciences. Vol: 3(1), 43-48.

155) Negahdaripour M, Nezafat N, Hajighahramani N, Rahmatabadi S, Ghasemi Y*

(2017). Investigating CRISPR-Cas systems in Clostridium botulinum via

bioinformatics tools. Infection, Genetics and Evolution. Vol: 54, 355-373.

156) Ranmadugala D, Ebrahiminezhad A, Manley-Harris M, Ghasemi Y, Berenjian A

(2017). Iron oxide nanoparticles in modern microbiology and biotechnology.

Critical Reviews in Microbiology. Vol: 43(3), 493–507.

Dr.Younes Ghasemi 22

157) Ranmadugala D, Ebrahiminezhad A , Manley-Harris M , Ghasemi Y , Berenjian A

(2017). Impact of 3–aminopropyltriethoxysilane-coated iron oxide nanoparticles

on menaquinone-7 production using B. subtilis. Nanomaterials. Vol: 7(11), 1-

10.

158) Nabavizadeh M, Abbaszadegan A, Gholami A, Kadkhoda Z, Mirhadi H, Ghasemi Y,

Safari A, Hemmateenejad B, Dorostkar S , Sharghi H (2017). Antibiofilm

efficacy of positively charged imidazolium-based silver nanoparticles in

Enterococcus faecalis using quantitative real-time PCR. Jundishapur Journal

of Microbiology.Vol: 10(10), 1-7.

159) Negahdaripour M, Eslami M, Nezafat N, Hajighahramani N, Ghoshoon M.B,

Shoolian S, Dehshahri A, Erfani N, Morowvat M.H, Ghasemi Y* (2017). A

novel HPV prophylactic peptide vaccine, designed by immunoinformatics and

structural vaccinology approache. Infection, Genetics and Evolution. Vol: 54,

402-416.

160) Rahmatabadi S, Sadeghian I, Nezafat N, Negahdaripour M, Hajighahramani N,

hemmati SH, Ghasemi Y* (2017). In silico investigation of pullulanase enzymes

from various Bacillus species. Current Proteomics. Vol: 14(3), 175-185.

161) Ranmadugala D, Ebrahiminezhad A, Manley-Harris M, Ghasemi Y, Berenjian A

(2017). The effect of iron oxide nanoparticles on Bacillus subtilis biofilm,

growth and viability. Process Biochemistry. vol: 62. 231-240.

162) Morowvat MH. Ghasemi Y (2017). Impacts of nitrogen starvation on expression

profiles of involving genes in triacylglycerol biosynthesis in Chlamydomonas

reinhardtii: towards microalgal systems biotechnology. Journal of Young

Pharmacists. Vol: 9(4), 496-501.

163) Hajighahramani N, Nezafat N, Eslami M, Negahdaripour M, Rahmatabadi S

Ghasemi Y* (2017). Immunoinformatics analysis and in silico designing of a

novel multi-epitope peptide vacine against Staphylococcus aureus. Infection,

Genetics and Evolution. Vol: 48, 83-94.

Dr.Younes Ghasemi 23

164) Yari M, Ghoshoon M.B, Vakili B, Ghasemi Y* (2017). Therapeutic enzyms:

application and approaches to pharmacological improvement. Current

Pharmaceutical Biotechnology. Vol: 18(7), 531-540.

165) Negahdaripour M, Nezafat N, Hajighahramani N, Rahmatabadi S, Morowvat MH,

Ghasemi Y (2017). In silico study of different signal peptides for secretory

production of interleukin-11 in Escherichia coli. Current Proteomics. Vol: 14,

112-121.

166) Nezafat N, Eslami M, Negahdaripour M, Rahbar MR, Ghasemi Y*(2017).

Designing an efficient multi-epitope oral vaccine against Helicobacter pylori

using immunoinformatics and structural vaccinology approaches. Molecular

BioSystems. Vol: 13(4), 699-713.

167) Adibi M, Soltani Hekmat A, Mobasher N, Ghasemi Y, Mohkam M, Jafari SH,

Mobasher MA (2017). The effects of HPMC concentration as a new

pharmaceutical dosage form on phage release pattern from gels. Trends in

Pharmaceutical Sciences. Vol: 3(1), 19-24.

168) Irajie C, Mohkam M, Nezafat N, Mohammadi F, Ghasemi Y (2017). In silico

analysis of nattokinase from Bacillus subtilis sp natto. International Journal of

Pharmaceutical and Clinical Research. Vol: 9(4), 286-292.

169) Mousavi P, Mostafavi-Pour Z, Morowvat MH, Nezafat N, Zamani M, Berenjian A,

Ghasemi Y* (2017). In silico analysis of several signal peptides for the excretory

production of reteplase in Escherichia coli. Current Proteomics. Vol: 14(4).

326-335.

170) Shaker S, Morowvat MH, Ghasemi Y (2017). Effects of sulfur, Iron and Manganese

starvation on growth, β-carotene production and lipid profile of Dunaliella

salina. Journal of Young Pharmacists. Vol: 9(1), 43-46.

171) Ebrahiminezhad A, Manafi Z, Berenjian A, Kianpour S, Ghasemi Y* (2017). Iron-

reducing bacteria and Iron nanostructures. Journal of Advanced Medical

Sciences and Applied Technologies. Vol: 3(1), 9-16.

172) Gholami A, Khabnadideh S, Ghasemi Y , Mirjalili F, Shahmoradi R, Zamani L

(2017). TiCl4/nano-sawdust as an efficient biocatalyst for the synthesis of highly

substituted dihydro- 2-oxopyrroles as antimicrobial agents. British Journal of

Pharmaceutical Research. Vol: 16(2), 1-14.

Dr.Younes Ghasemi 24

173) Ebrahiminezhad A, Taghizadeh M, Taghizadeh S, Ghasemi Y (2017). Chemical and

biological approaches for the synthesis of silver nanoparticles; A mini Review.

Trends in Pharmaceutical Sciences. Vol: 3(2), 55-62.

174) Banihashemi M, Safari A, Nezafat N, Tahamtan M, Negahdaripour M, Azarpira N,

Ghasemi Y* (2017). Effect of fibrin packing on managing hepatic hemorrhage

and liver wound healing in a model of liver stab wound in rat. Journal of

Bulletin of Emergency and Trauma. Vol: 5(1), 18-23.

175) Gholami A, Ghoshoon M.B, Ghafari P, Ghasemi Y* (2017). The effect of different

positively charged silver nanoparticles against bacteria, fungi and mammalian

cell line. Trends in Pharmaceutical Sciences. Vol: 3(2), 135-142.

176) Kianpour S , Ebrahiminezhad A, Mohkam M, Tamaddon AM, Dehshahri A,

Heidari R, Ghasemi Y (2017). Physicochemical and biological characteristics of

the nanostructured polysaccharide-iron hydrogel produced by microorganism

Klebsiella oxytoca. Journal of Basic Microbiology. Vol: 57(2).132-140.

177) Raee MJ, Ghasemian A, Maghami S, Ghoshoon MB, Ghasemi Y* (2017).

Cloning, purification and enzymatic assay of streptokinase gene from

Streptococcus pyogenes in Escherichia coli. Minerva Biotecnologica. Vol:

29(1), 8-13.

178) Mahmoodi Sh, Nezafat N, Sarmadi S, Zarghami N, Ghasemi Y* (2017). Expression

and purification of a novel multi-epitope peptide vaccine for breast cancer

immunotherapy. Minerva Biotecnologica. Vol: 29(1), 1-7.

179) Ebrahiminezhad A, Barzegar Y, Ghasemi Y, Berenjian A (2017). Green synthesis

and characterization of silver nanoparticles using Alcea rosea flower extract as

new generation of antimicrobials. Chemical Industry and Chemical

Engineering Quartely. Vol: 23(1), 31-37.

180) Mehraban MH, Odooli S, Yousefi R, roghanian R, Motovali-Bashi M, Moosavi-

Movahedi A, Ghasemi Y* (2017). The interaction of beta-lactoglobulin with

ciprofloxacin and kanamycin; a spectroscopic and molecular modeling

approach. Journal of Biomolecular Structure and Dynamics. Vol: 35(9),

1968–1978.

Dr.Younes Ghasemi 25

181) Mohammadi M, Nejatollahi F, Ghasemi Y, Faraji N (2017). Anti- Metastatic and

Anti-Invasion effects of a specific Anti-MUC18 scFv antibody on breast cancer

cells. Applied Biochemistry and Biotechnology. Vol: 181(1), 379–390.

182) Hajiebrahimi A, Ghasemi Y, Sakhteman A (2017). FLIP: An assisting software in

structure based drug design using fingerprint of protein-ligand interaction

profiles. Journal of Molecular Graphics and Modelling. Vol: 78, 234–244.

183) Ebrahiminezhad A, Taghizadeh S, Berenjian A , Naeini FH, Ghasemi Y (2017).

Green synthesis of silver nanoparticles capped with natural carbohydrates using

ephedra intermedia. Nanoscience and Nanotechnology-Asia. Vol: 7(1), 104-

112.

184) Negahdaripour M, Nezafat N, Ghasemi Y* (2016). A panoramic review and in silico

analysis of IL-11 structure and function. Cytokine and Growth Factor

Reviews. Vol: 32, 41-61.

185) Mohkam M, Nezafat N, Berenjian A, Mobasher MA, Ghasemi Y* (2016).

Identification of Bacillus probiotics isolated from soil rhizosphere using 16S

rRNA, recA, rpoB, gene sequencing and RAPD PCR. Probiotics and

Antimicrobial Proteins. Vol: 8(1), 8-18.

186) Dabbagh F, Ghoshoon MB, Hemmati S, Zamani M, Mohkam M, Ghasemi Y*

(2016). Engineering human urate oxidase: Towards reactivating it as an

important therapeutic enzyme. Current Pharmaceutical Biotechnology. Vol:

17(2), 141-146.

187) Ansari Qeshmi S, Dabbagh F, Borhani Haghighi A, Ghasemi Y* (2016).

Bioinformatics evaluation of the possibility of heat shock proteins as

autoantigens in multiple sclerosis based on molecular mimicry hypothesis.

Journal of Neuroimmunology. Vol: 295-296, 100-121.

188) Rahmatabadi S, Nezafat N, Negahdaripour M, Hajighahramani N, Morowvat MH,

Ghasemi Y* (2016). Studying the features of 57 confirmed CRISPR loci in 29

strains of Escherichia coli. Journal of Basic Microbiology. Vol: 56(1), 1–9.

Dr.Younes Ghasemi 26

189) Morowvat, M.H., Ghasemi, Y (2016). Spray-drying microencapsulation of β-

carotene contents in powdered Dunaliella salina biomass. International

Journal of Pharmaceutical and Clinical Research. Vol: 8(11), 1533-1536.

190) Abbaszadeghan A, Dadolahi S, Gholami A, Moien MR, Hamedani SH, Ghasemi Y,

Abbott PV (2016). Antimicrobial and cytotoxic activity of Cinnamomum

zeylanicum, calcium hydroxide, and triple antibiotic paste as root canal dressing

materials. Journal of Contemporary Dental Practice. Vol: 17(2), 105-113.

191) Montazeri-Najafabady N, Ghasemi Y*, Mobasher MA (2016). Optimization of

culture conditions for expression of human interleukin 11 in using response

surface methodology. BioPharm International. Vol: 29(11), 30-35.

192) Ahrari S, Dabbagh F, Ahrari S, Ghasemi Y*, Mogharrab N, Riazalhosseini Y

(2016). Rational design and engineering of a mutant variant of urate oxidase as a

therapeutic enzyme: a molecular dynamics simulation approach. Current

Computer-Aided Drug Design. Vol: 13(1), 30-38.

193) Ebrahimi N, Rasoul-Amini S, Niazi A, Erfani N, Moghadam A, Ebrahiminezhad A,

Ghasemi Y* (2016). Cytotoxic and apoptotic effects of three types of silver-iron

oxide binary hybrid nanoparticles. Current Pharmaceutical Biotechnology.

Vol: 17(12), 1049-1057.

194) Jafari SH, Mobasher N, Ghasemi Y, Museli S, Bidad S, mobasher MA (2016).

Evaluation and comparison of the toxicity of some iranian native plants and

Microalgae; Using Brine Shrimp Test (BST). Trends in Pharmaceutical

Sciences. Vol: 2(4), 285-290.

195) Odooli S, Safari A, Kargar M, Ghasemi Y* (2016). Selective detection, isolation and

enumeration of Bifidobacterium animalis subsp. lactis BB-12 from Iranian

commercial probiotic yoghurts. Trends in Pharmaceutical Sciences. Vol: 2(4),

265-276.

196) Morowvat MH, Ghasemi Y (2016). Developing a robust method for quantification

of β-carotene in Dunaliella salina biomass using HPLC method. International

Journal of Pharmaceutical and Clinical Research. Vol: 8(10), 1423-1428.

197) Morowvat MH, Ghasemi Y (2016). Medium optimization by artificial neural

networks for maximizing the triglycerides-rich lipids from biomass of Chlorella

Dr.Younes Ghasemi 27

vulgaris. International Journal of Pharmaceutical and Clinical Research.

Vol: 8(10), 1414-1417.

198) Morowvat MH, Ghasemi Y (2016). Evaluation of antioxidant properties of some

naturally isolated microalgae: Identification and characterization of the most

efficient strain. Biocatalysis and Agricultural Biotechnology. Vol: 8, 263–269.

199) Morowvat MH, Ghasemi Y (2016). Rapid determination of lipid accumulation

under sulfur starvation in Chlamydomonas reinhardtii microalga using fourier

transform infrared (FTIR) spectroscopy. International Journal of

Pharmaceutical and Clinical Research. Vol: 8(9), 1356-1360.

200) Mahmoodi Sh, Nezafat N, Barzegar A, Negahdaripour M, Nikanfar AR, Zarghami

N, Ghasemi Y* (2016). Harnessing bioinformatics for designing a novel multi-

epitope peptide vaccine against breast cancer. Current Pharmaceutical

Biotechnology. Vol: 17(12), 1099-1113.

201) Nikbakht M, Gholami A, Morowvat MH, Ghasemi Y, Mohagheghzadeh A (2016).

Analysis of volatiles and 18S rRNA gene of Haplophyllum canaliculatum in in

vitro cultures. Research Journal of Pharmacognosy. Vol: 3(4), 17-25.

202) Morowvat MH, Ghasemi Y (2016). Screening of some naturally isolated microalgal

strains for polyunsaturated fatty acids production. Asian Journal of

Pharmaceutical Research and Health Care. Vol: 8(4), 122-130.

203) Mousavi P, Morowvat MH, Montazeri-Najafabady N, Abolhassanzadeh Z,

Mohagheghzadeh A, Hamidi M, Niazi A, Ghasemi Y* (2016). Investigating the

effects of phytohormones on growth and β-carotene production in a naturally

isolates stain of Dunaliella salina. Journal of Applied Pharmaceutical Science.

Vol: 6(8), 164-171.

204) Nezafat N, Karimi Z, Eslami M, Mohkam M, Zandian S, Ghasemi Y* (2016).

Designing an efficient multi-epitope peptide vaccine against Vibrio cholerae

via combined immunoinformatics and protein interaction based approaches.

Computational Biology and Chemistry. Vol: 62, 82-95.

205) Banihashemi M, safari A, Mohkam M, Shaabani MS, Rasoul-Amini S, Ghasemi Y*

(2016). Statistical medium optimization to increase rhamnolipid production by

pseudomonas Aeruginosa sp. MB2. Minerva Biotechnologica. Vol: 28(4), 193-

200.

Dr.Younes Ghasemi 28

206) Sakhteman A, Khoddami M, Negahdaripour M, Mehdizadeh A, Tatar M, Ghasemi

Y (2016). Exploring 3D structure of human gonadotropin hormone receptor at

antagonist state using homology modeling, molecular dynamic simulation and

cross-docking studies. Journal of Molecular Modeling. Vol: 22(11), 1-11.

207) Morowvat M H, Ghasemi Y (2016). Culture medium optimization for enhanced β-

carotene and biomass production by Dunaliella salina in mixotrophic culture.

Biocatalysis and Agricultural Biotechnology. Vol: 7, 217-223.

208) Irajie C, Mohkam M, Nezafat N, Hosseinzadeh S, Aminlari M, Ghasemi Y* (2016).

In silico analysis of glutaminase from different species of Escherichia and

Bacillus. Iranian Journal of Medical Sciences. Vol: 41(5), 1-9.

209) Zarei M, Mobasher MA, Morowvat MH, Mousavi P, Montazeri-Najafabady N,

Hajighahramani N, Ghasemi Y* (2016). Effects of menthone and piperitone on

growth, chlorophyll a and β-carotene production in Dunaliella salina. Journal of

Applied Pharmaceutical Science. Vol: 6 (09), 215-219.

210) Anbaraki A, Khoshaman K, Ghasemi Y, Yousefi R (2016). Preventive role of lens

antioxidant defense mechanism against riboflavin-mediated sunlight damaging

of lens crystallins. International Journal of Biological Macromolecules. Vol:

91, 895-904.

211) Montazeri-Najafabady N, Negahdaripour M, Salehi MH, Morowvat MH, Shaker S,

Ghasemi Y* (2016). Effects of osmotic shock on production of β-carotene and

glycerol in a naturally isolated strain of Dunaliella salina. Journal of Applied

Pharmaceutical Science. Vol: 6(8), 160-163.

212) Mobasher MA, Montazeri-Najafabady N, Ghasemi Y* (2016). An optimized

condition for vinegar production in fermenter by Gluconobacter oxydans.

Minerva Biotecnologica. Vol: 28(3), 121-125.

213) Ebrahiminezhad A, Taghizadeh S, Berenjian A, Rahia A, Ghasemi Y* (2016).

Synthesis and characterization of silver nanoparticles with natural carbohydrate

capping using Zataria multiflora. Advanced Materials Letters. Vol: 7(6), 100-

150.

Dr.Younes Ghasemi 29

214) Southee R, Haroon S, Ebrahiminezad A, Ghasemi Y, Berenjian A (2016). Novel

functional fermented dairy product rich in menaquinone-7. Biocatalysis and

Agricultural Biotechnology. Vol: 7, 31-35.

215) Mortazavi M, Nezafat N, Negahdaripour M, Gholami A, Torkzadeh-Mahani M,

Lotfi S, Ghasemi Y* (2016). In silico evaluation of rare codons and their

positions in the structure of cytosine deaminase and substrate docking studies.

Trends in Phramaceutical Sciences.Vol: 2(2), 117-130.

216) Shokri D, Rabbani Khorasgani M, Zaghian S, Fatemi M, Mohkam M, Ghasemi Y,

Taheri-Kafrani A (2016). Determination of acquired resistance profiles of

Pseudomonas aeruginosa isolates and characterization of an effective

bacteriocin-like inhibitory Ssubstance (BLIS) against these isolates.

Jundishapur Journal of Microbiology. Vol: 9(8), 1-8.

217) Ebrahimi N, Gharibi S, Ghoshoon MB, Karimi Z, Gholami A,

Nezafat N, Mohkam M, Ghasemi Y* (2016). Selective isolation and

identification of arginine degrading bacteria; the optimized arginine deaminase

production by enterobacter sp. sgn1 as a new source of this potentially anti-

tumor enzyme. Journal of Applied Pharmaceutical Science. Vol: 6(9), 93-

101.

218) Ebrahimi N, Rasoul-Amini S, Ebrahiminezhad A, Ghasemi Y, Gholami A, Seradj H

(2016). Comparative study on characteristics and cytotoxicity of bifunctional

magnetic-silver nanostructures: synthesized using three different reducing

agents. Acta Metallurgica Sinica. Vol: 29(4), 326-334.

219) Montazeri-Najafabady N, Rasoul-Amini S, Mobasher MA, Ghasemi Y* (2016).

Chroococcus disperses: a novel unicellular cyanobacterium for biodiesel

production. Minerva Biotecnologica. Vol: 28(3), 126-130.

220) Ebrahiminezhad A, Raee MJ, Manafi Z, Sotoodeh Jahromi A, Ghasemi Y* (2016).

Ancient and novel forms of silver in medicine and biomedicine. Journal of

Advanced Medical Sciences and Applied Technologies. Vol: 2(1), 122-128.

221) Ghasemian A, Moradpour Z, Baniasad M, Ghasemi Y (2016). Isolation, molecular

identification and characterization of the culture conditions for extracellular

uricase production by a new strain of Pseudomonas sp. Journal of Pure and

Applied Microbiology.Vol: 9(4), 2813-2821.

Dr.Younes Ghasemi 30

222) Ghasemi Y*, Afrasiabi N, Ebrahimi N, Ghoshoon MB, Nezafat N, Zamani M, Raee

MJ (2016). Cloning, expression and characterization of CYP109B1 gene from

Bacillus subtilis. Minerva Biotecnologica. Vol: 28(2), 81-85.

223) Karimi Z, Mobasher MA, Khoubani S, Pakrouh Z, Ghoshoon MB, Montazeri-

Najafabady N, Ghasemi Y* (2016). Cloning and expression of Pseudomonas

aeruginosa superoxide dismutase enzymein Escherichia coli. Minerva

Biotecnologica. Vol: 28(3). 131-135.

224) Mosaviazam B, Ramezani A, Morowvat MH, Niazi A, Mousavi P, Moghadam A,

Zarrini GH, Ghasemi Y* (2016). HSP70 gene expression analysis in Dunaliella

salina under salt stress. International Journal of Pharmacognosy and

Phytochemical Research. Vol: 8(5), 767-770.

225) Shahbazi M, dabbagh F, Ghoshoon MB, Kazemi A, Ghasemi Y* (2016). Gene

cloning, heterologous expression, characterization and optimization of

fermentation conditions of keratinase from Bacillus sp. MKRI. Minerva

Biotecnologica. Vol: 28(3), 136-145.

226) Ragerdi Kashani M, Yousefi R, Akbarian M, Alavianmehr M M, Ghasemi Y

(2016). Structure, chaperone activity, and aggregation of wild-type and R12C

Mutant αB-Crystallins in the Presence of Thermal Stress and Calcium Ion-

iImplications for role of calcium in cataract pathogenesis. Biochemistry. Vol:

81(2), 122-134.

227) Raee MJ , Maghami S , Ghoshoon MB , Mohkam M , Zamani M , Ebrahimi N ,

Ghasemi Y* (2016). Molecular cloning, characterization and bioinformatics

analysis of CYP152A1 gene from Bacillus Sabtilis in Escherchia Coli. Minerva

Biotechnologica. Vol: 28(1), 8-12.

228) Zamani M, Nezafat N, Ghasemi Y* (2016). Evaluation of recombinant human

growth hormone secretion in E. coli using the L-asparaginase II signal Peptide.

Avicenna Journal of Medical Biotechnology. Vol: 8(4), 182-187.

229) Shahbazi M, Haghkhah M, Rahbar MR, Nezafat N ,Ghasemi Y* (2016). In silico

sub-unit hexavalent peptide vaccine against an Staphylococcus aureus biofilm-

related infection. International Journal of Peptide Research and

Therapeutics. Vol: 22(1), 101-117.

Dr.Younes Ghasemi 31

230) Mohkam M, Rasoul-Amini S, Shokri D, Berenjian A, Rahimi F, Sadraeian M ,

Khalvati B, Gholami A, Ghasemi Y* (2016). Characterization and in vitro

probiotic assessment of potential indigenous Bacillus strains isolated from soil

rhizosphere. Minerva Biotecnologica. Vol: 28(1), 19-28.

231) Ebrahiminezhad A, Vikas Varma, Shuyi Yang, Ghasemi Y, Berenjian A (2016).

Synthesise and application of amine functionalized Iron Oxide Nanoparticles on

Menaquinone-7 Fermentation: A Step towards Process Intensification.

Nanomaterials. Vol: 6(1). 1-8.

232) Gholami A, Rasoul-amini S 3, Ebrahiminejad A, Abootalebi N, Niroumand U,

Ebrahimi N, Ghasemi Y ( 2016). Magnetic properties and antimicrobial effect

of amino and lipoamino acid coated iron oxide nanoparticle Minerva

Biotecnologica Vol: 28(4), 177-186.

233) Abbaszadegan A, Gholami A, Ghahramani Y, Ghareghan R, Ghareghan M, Kazemi

A, Iraji A, Ghasemi Y* (2016). Antimicrobial and cytotoxic activity of Cuminum

Cyminum as an intracanal medicament compared to Chlorhexidine gel. Iranian

Endodontic Journal. Vol: 11(1), 44-50.

234) Sedigh-Shams M, Gholami A, Abbaszadegana A, Yazdanparast R, Saberi Nejad M,

Safari A, Nabavizadeh MR , Ghasemi Y (2016). Antimicrobial efficacy and

cytocompatibility of calcium hypochlorite solution as a root canal irrigant: An in

vitro investigation. Iranian Endodontic Journal. Vol: 11(3), 169-174.

235) Ghasemi Y*, Hajighahremani N, Dabbagh F, Ghoshoon MB, Yarahmadi E,

Mobasher MA, Montazeri-Najafabady N (2016). Cloning, expression,

purification and expression condition optimization of α-enolase from

Staphylococcus aureus in Escherichia coli. Minerva Biotecnologica. Vol: 28(1),

33-38.

236) Ebrahiminezhad A, Berenjian A, Ghasemi Y* (2016). Template free synthesis of

natural carbohydrates functionalized fluorescent silver nanoclusters. IET

NanoBiotechnology. Vol: 10 (3), 120-123.

237) Mobasher A, Ghasemi Y*, Montazeri-Najafabady N, Tahzibi A (2016). Expression

of recombinant IFN beta 1-b: a comparison between soluble and insoluble

forms. Minerva Biotecnologica. Vol: 28(1), 39-43.

Dr.Younes Ghasemi 32

238) Ebrahiminezhad A, Bagheri M, Taghizadeh SM, Berenjian A, Ghasemi Y* (2016).

Biomimetic synthesis of silver nanoparticles using microalgal secretory

carbohydrates as a novel anticancer and antimicrobial. Advanced in Natural

Sciences. Nanoscience and Nanotechnology. Vol: 7(1), 1-8.

239) Gholami A, Mohkam M, Rasoul-Amini S, Ghasemi Y* (2016). Industrial

production of polyhydroxyalkanoates by bacteria: opportunities and

challenges. Minerva Biotecnologica. Vol: 28 (1), 59-74.

240) Kazemi A, Lorpour M, Gholami A, Karimi-Ghavamabadolya R, Safari A, Solhjoo

K, Ghasemi Y* (2015). High level amylase production by Pseudomonas stutzeri

ML-18; isolation, identification and media optimization in a fermentation system

using response surface methodology (RSM). Journal of pure and applied

microbiology.Vol: 9, 127- 133.

241) Mehraban M H, Ghasemi Y, Vallian S (2015). A computational comparative study

of α-Glucosidase enzyme divergence. Journal of Applied Bioinformatic &

Computational Biology. Vol: 4 (2), 1-3.

242) Nezafat N, Negahdaripour M, Gholami A, Ghasemi Y* (2015). Computational

analysis of collagenase from different vibrio, clostridium and Bacillus strains to

find new enzyme sources. Trends in Phramaceutical Sciences. Vol: 1(4), 213-

222.

243) Karimi Z, Nezafat N, Negahdaripour M, Berenjian A, Hemmati Sh, Ghasemi Y*

(2015). The effect of rare codons following the ATG starts codon on expression

of human granulocyte-colony stimulating factor in Escherichia coli. Protein

Expression and Purification. Vol: 114, 108-114.

244) Ghoshoon MB, Berenjian A, Hemmati S, Dabbagh F, Karimi Z, Negahdaripour M,

Ghasemi Y* (2015). Extracellular production of recombinant L-Asparaginase II

in Escherichia coli: Medium optimization using response surface

methodology. International Journal of Peptide Research and Therapeutics.

Vol: 21, 487–495.

245) Ebrahiminezhad A, Rasoul-Amini S, Kouhpayeh A, Davaran S, Barar J, Ghasemi

Y (2015). Impacts of Amine Functionalized Iron Oxide Nanoparticles on HepG2

Cell Line. Current Nanoscience. Vol: 11(1).

Dr.Younes Ghasemi 33

246) Gholami A, Shahin S, Mohkam, M Nezafat N, Ghasemi Y* (2015). Cloning,

characterization and bioinformatics analysis of novel cytosine deaminase from

Escherichia coli AGH09. International Journal of Peptide Research and

Therapeutics. Vol: 21, 365–374.

247) Nezafat N, Sadraeian M, Rahbar MR, Mohkam M, Gholami A, Banihashemi M,

Khoshnoud MJ, Ghasemi Y* (2015). Production of a novel multi-epitope peptide

vaccine for cancer immunotherapy in TC-1 tumor-bearing mice. Biologicals.

Vol: 43, 11-17.

248) Zare MH, Mohkam M, Morowvat MH, Nezafat N, Ghasemi Y* (2015). Probiotic

potential of five Lactobacillus strains isolated from traditional Persian yoghurt in

Fars province, Iran: Viewing through the window of phylogenetics. Biosciences

Biotechnology Research Asia. Vol: 12(2), 1265-1272.

249) Farhadi T, Nezafat N, Ghasemi Y*, Karimi Z, Hemmati S, Erfani N (2015).

Designing of complex multi-epitope peptide vaccine based on Omps of

Klebsiella pneumoniae: An in silico approach. International Journal of

Peptide Research and Therapeutics. Vol: 21(3), 325–341.

250) Najafi H, Abolmaali S, Owrangi B, Ghasemi Y, Tamaddon MA (2015). Serum

resistant and enhanced transfection of plasmid DNA by PEG-stabilized polyplex

nanoparticles of L-histidine substituted poly ethyleneimine. Macromolecular

Research. Vol: 23(7), 618-627.

251) Faridi P , Rezaei Z, Mohagheghzadeh A, Hamidpour M, Morowvat MH, Khalaj A,

Ghasemi Y* (2015). Chemical Composition and Antimicrobial, Activity of

Volatile Oil of Phoenix dactylifera Staminate Flower Spikes. International

Journal of Pharmacognosy and Phytochemical Research. Vol: 7(6), 1139-

1141.

252) Shaker S, Nemati A, Montazeri-Najafabady, Mobasher MA, Morowwvat MH,

Ghasemi Y* (2015) Treating urban wastewater: Nutreint removal by using

immobilized green algae in batch cultures. International Journal of

Phytoremediation. Vol: 17(12), 1177-1182.

253) Farhadi T, Karimi Z, Ghasemi Y*, Nezafat N, Hemmati S, Erfani N (2015).

Production of a novel multi-epitope vaccine based on outer membrane proteins

Dr.Younes Ghasemi 34

of Klebsiella pneumoniae. Trends in Pharmaceutical Sciences. Vol: 1(3), 167-

172.

254) Zamani M, Berenjian A, Hemmati S, Nezafat N, Ghoshoon MB, Dabbagh F,

Mohkam M, Ghasemi Y (2015). Cloning, expression, and purification of a

synthetic human growth hormone in Escherichia coli using response surface

methodology. Molecular Biotechnology. Vol: 57(3), 241-250.

255) Lorpour M, Kazemi A, Gholami A, Dabbagh F, Abbaaszadeh S, Safari A, Ghasemi

Y* (2015). Isolation and phylogenetic analysis of some lipase producing bacteria

from a saline lake. Journal of Pure and Applied Microbiology. Vol; 9(1), 497-

502.

256) Banihashemi M, Mohkam M, Safari A, Nezafat N, Negahdaripour M, Mohammadi

F, Kianpour S, Ghasemi Y* (2015). Optimization of three dimensional culturing

of the HepG2 cell line in fibrin scaffold. Hepatitis Monthly. Vol: 15(3).

257) Farhadi T, Nezafat N, Ghasemi Y* (2015). In silico phylogenetic analysis of Vibrio

cholerae isolates based on three housekeeping genes. International Journal of

Computational Biology and Drug Design. Vol: 8(1). 62-74.

258) Ghasemi Y*, Abedtash H, Morowvat MH, Mohagheghzadeh A, Ardeshir-Rouhani-

Fard (2015). Essential oil composition and bioinformatic analysis of Spanish

broom (Spartium junceum L.). Trends in Pharmaceutical Sciences. Vol: 1(2),

97-104.

259) Zamani M, Nezafat N, Negahdaripour M, Dabbagh F, Ghasemi Y* (2015). In silico

evaluation of different signal peptides for the secretory production of human

growth hormone in E.Coli. International Journal of Peptide Research and

Therapeutics. Vol: 21, 261–268.

260) Gholami A, Rasoul-Amini S, Ebrahiminezhad A, Seradj SH, Ghasemi Y* (2015).

Lipoamino Acid Coated Superparamagnetic Iron Oxide Nanoparticles

Concentration and Time Dependently Enhanced Growth of Human

Hepatocarcinoma Cell Line (Hep-G2). Journal of Nanomaterials. Vol: 16(1),

1-9.

261) Abbaszadegan A, Nabavizadeh M, Gholami A, Aleyasin ZS, Dorostkar S,

Saliminasab M, Ghasemi Y, Hemmateenejad B, Sharghi H (2015). Positively

charged imidazolium-based ionic liquid-protected silver nanoparticles: a

Dr.Younes Ghasemi 35

promising disinfectant in root canal treatment. International Endodontic

Journal. Vol: 48(8), 790-800.

262) Dabbagh F, Negahdaripour M, Berenjian A, Behfar A, Mohammadi F, Zamani M,

Irajie C, Ghasemi Y* (2014). Nattokinase: production and application. Applied

Microbiology and Biotechnology. Vol: 98(22), 9199-9206.

263) Dabbagh F, Borhani-Haghighi A, Rasoul-Amini, Ghasemi Y* (2014). Behçet’s

disease: from heat shock proteins to infections. Asian Biomedicine. Vol: 8(2),

139-155.

264) Ghasemi Y*, Yarahmadi E, Ghoshoon MB, Dabbagh F, Hajighahremani N,

Ebrahimi N, Mobasher MA, Montazeri-Najafabadi N (2014). Cloning,

expression and purification of laccase enzyme gene from Bacillus subtilis in

Escherichia coli. Minerva Biotecnologica. Vol: 26(3), 295-300.

265) Nezafat N, Ghasemi Y, Javadi G, Khoshnoud MJ, Omidinia E (2014). A novel

multi-epitope peptide vaccine against cancer: an in silico approach. Journal of

Theoretical Biology. Vol: 349, 121-134.

266) Ebrahiminezhad A, Najafipour S, Kouhpayeh A, Berenjian A, Rasoul-Amini S,

Ghasemi Y* (2014). Facile fabrication of uniform hollow silica microspheres

using a novel biological template. Colloids and Surfaces B: Biointerfaces.

Vol: 118, 249-253.

267) Ghorbani A, Rahimpour MA, Ghasemi Y, Zoughi S, Rahimpour HR (2014). A

review of carbon capture and sequestration in Iran: microalgal biofixation

potential in Iran. Renewable & Sustainable Energy Reviews. Vol: 35, 73-100.

268) Assa F, Jafarizadeh-Malmiri H, Anarjan N, Berenjian A, Ghasemi Y* (2014)

Applications of Chitosan Nanoparticles in Active Biodegradable and Sustainable

Food Packaging, Renewable Energy and Sustainable Development, 1st Edition,

Nova Press, New York.

269) Nabavizadeh M, Abbaszadegan A, Gholami A, Sheikhiani R, Shokouhi M, Shams

MS, Ghasemi Y* (2014). Chemical constituent and antimicrobial effect of

essential oil from Myrtus communis leaves on microorganisms involved in

persistent endodontic infection compared to two common endodontic irrigants:

An in vitro study. Journal of Conservative Dentistry. Vol: 17(5), 449-453.

Dr.Younes Ghasemi 36

270) Deylami E, Nejadsattari T, Ghasemi Y, Shokravi S (2014). Morphological

variability survey of cyanobacterium Anabaena sp. ISC55 in liquid mixotrophe

treatment. Journal of Biodiversity and Environmental Sciences. Vol: 5(2),

77-84.

271) Deylami E, Nejadsattari T, Ghasemi Y, Shokravi S (2014). The analysis of

morphological acclimation of cyanobacterium Leptolyngbya sp. Isc25 to

combined treatment of mixotrophe-red light rays. European Journal of

Experimental Biology. Vol: 4(3), 143-150.

272) Ghasemi Y*, Sadeghi H, Gholami A, Mohkam M, Kargar M (2014). Isolation and

identification of highly xylanase producing bacterium Sphingobacterium sp.

SaH-05 from soil. International Journal of Scientific and Engineering

Research. Vol: 5(3), 205-209.

273) Montazeri-Najafabady N, Ghasemi Y*, Mobasher A, Ghasemian A, Rasoul-Amini

S, Ebrahimi S (2014). Codon optimization, cloning and expression of interleukin

11 in two different E. coli systems. Journal of pure and Applied

Microbiology. Vol: 7(4), 2717-2722.

274) Ebrahiminezhad A, Rasoul-Amini S, Davaran S, Barar J, Ghasemi Y* (2014).

Impacts of Iron Oxide Nanoparticles on the Invasion Power of Listeria

monocytogenesCurrent Nanoscience. Vol: 10, 382-388.

275) Ghasemi Y*, Mohkam M, Ghasemian A, Rasoul-Amini S (2014) Experimental

design of medium optimization for invertase production by Pichia sp. Journal of

Food Sciences and Technology. Vol: 51(2), 265-275.

276) Berenjian A, Mahanama R, Kavanagh J, Dehghani F, Ghasemi Y* (2014).

Nattokinase production: Medium components and feeding strategy studies.

Chemical Industry and Chemical Engineering Quartely. Vol: 20(4), 541-

547.

277) Rasoul-Amini S, Mousavi P, Montazeri-Najafabady N, Mobasher MA, Mousavi S,

Vosough F, Dabbagh F, Ghasemi Y* (2014). Biodiesel properties of native

Strain of Dunaliella Salina. International Journal of Renewable Energy

Research. Vol: 4(1), 39-41.

Dr.Younes Ghasemi 37

278) Ebrahiminezhad A, Rasoul-Amini S, Ghoshoon MB, Ghasemi Y* (2014) Chlorella

vulgaris, a novel microalgal source for L-asparaginase production. Biocatalysis

and Agricultural Biotechnology. Vol: 3, 214-217.

279) Kazemi A, Rasoul-Amini S, Shahbazi M, Safari A, Ghasemi Y* (2014). Isolation,

identification and media optimization of high level cellulase production by

Bacillus sp., in a fermentation system using response surface methodology.

Preparative Biochemistry and Biotechnology. Vol: 44, 107-118.

280) Moradpour Z, Ghasemian A, Nouri F., Ghasemi Y (2014). Increased expression of

recombinant cholesterol oxidase in Escherichia coli by optimization of culture

condition using response surface methodology. Minerva Biotecnologica. Vol:

26(4), 281-286.

281) Rasoul-amini S, Montazeri-Najafabady N, Shaker S, Safari A, Kazemi A, Mousavi

P, Mobasher MA, Ghasemi Y* (2014). Removal of nitrogen and phosphorus

from wastewater using Microalgae free cells in bath culture system. Biocatalysis

and Agricultural Biotechnology. Vol: 3, 126-131.

282) Mobasher A, Ghasemi Y*, Montazeri-Najafabady N, Ghasemian A, Rasoul-Amini

S, Hemmati S, Ebrahimi S (2013). Two step production of optimized interferon

beta 1b; A way to overcome its toxicity. Journal of pure and Applied

Microbiology. Vol: 7(4), 2867-2871.

283) Sadraeian M, Rasoul-Amini S, Khoshnood MJ, Mohkam M, Ghoshoon MB,

Ghasemi Y* (2013). Induction of antitumor immunity against cervical cancer by

protein HPV-16 E7 in fusion with Ricin B chain in tomur-bearing mice.

International Journal of Gynecological Cancer. Vol: 23(5), 809-814.

284) Ashrafi H, Amini M, Mohammadi-Samani S, Ghasemi Y , Azadi A, Tabandeh MR,

Kamali-Sarvestani E, Daneshamouz S (2013). Nanostructure l-asparaginase-

fatty acid bioconjugate: Synthesis, preformulation study and biological

assessment. International Journal of Biological Macromolecules. Vol: 62,

180-187.

285) Sadraeian M, Khoshnood MJ, Mohkam M, Rasoul-Amini S, Hesaraki M, Ghasemi

Y* (2013). Prevention and inhibition of TC-1 cell growth in tumor bearing mice

by HPV16 E7 protein in fusion with shiga toxin B-subunit from Shigella

dysenteriae. Cell Journal. Vol: 15(2), 176-181.

Dr.Younes Ghasemi 38

286) Zomorodian K, Moein MR, Goeini-Lori Z, Ghasemi Y, Rahimi MJ , Bandegani

A, Pakshir K, Bazargani A, Mirzamohammadi S, Abbasi N (2013). Chemical

composition and antimicrobial activities of the essential oil from Myrtus

communis leaves. Journal of Essential Oil Bearing Plants. Vol: 16(1), 76-84.

287) Ghasemi Y, Archin T, Kargar M, Mohkam M (2013) A simple multiplex PCR for

assessing prevalence of extended-spectrum β-lactamases producing Klebsiella

pneumoniae in Intensive Care Units of a referral hospital in Shiraz, Iran. Asian

Pacific Journal of Tropical Medicine. Vol: 6(9), 412-420.

288) Faridi P, Ghasemi Y, Mohagheghzadeh A (2013) Chemical Composition of

Peganum harmala smoke and volatile oil. Journal of Essential Oil-Bearing

Plants. Vol: 16(6), 850-854.

289) Ebrahiminezhad A, Ghasemi Y, Rasoul-Amini S, Barar B, Davaran S. (2013).

Preparation of novel magnetic fluorescent nanoparticles using amino acids.

Colloids and Surfaces B: Biointerfaces. Vol: 102, 534-539.

290) Hosseini-Behbahani M, Ghasemi Y*, Khoshnoud MJ, Faridi P, Moradli G,

Montazeri-Najafabady N (2013). Volatile oil composition and antimicrobial

activity of two Thymus species. Pharmacognosy Journal. Vol: 5, 77-79.

291) Soltani Rad MN, Behrouz S, Movahedian A, Doroodmand MM, Ghasemi Y,

Rasoul-Amini S, Ahmadi-Gandomani A, Rezaie R (2013). Doped nano-sized

copper(I) oxide (Cu2O) on melamine_formaldehyde resin: a highly efficient

heterogeneous nano catalyst for click synthesis of some novel 1H-1,2,3-triazole

derivatives having antibacterial activity. Helvetica Chimica Acta. Vol: 96, 688-

701.

292) Sadraeian M, Ghoshoon MB, Mohkam M, Karimi Z, Rasoul-Amini S, Ghasemi Y*.

(2013). Modification in media composition to obtain secretory production of

STxB-based vaccines using Escherichia coli. Virologica Sinica. Vol: 28(1), 43-

48.

293) Ghasemi Y*, Dehdari Z, Mohkam M, Kargar M (2013). Isolation and optimization

of cultivation conditions for production of chitinase by Aeromonas sp. ZD_05

from the Persian Gulf. Journal of Pure and Applied Microbiology. Vol: 7(2),

913-918.

Dr.Younes Ghasemi 39

294) Aram F, Yarizade A, Niazi A, Ghasemi Y (2013). Determine effective

concentrations of β-lactam antibiotics against three strains of Agrobacterium

tumefaciens and Phytotoxicity on tomato and tobacco. International Journal of

Agronomy and Plant Production. Vol: 4(11), 2919-2925.

295) Moradpour Z, Ghasemian A, Safari A, Mohkam M, Ghasemi Y (2013) Isolation,

molecular identification and statistical optimization of culture condition for a

new extracellular cholesterol oxidase-producing strain using response surface

methodology. Annals of Microbiology. Vol: 63, 941-950

296) Ebrahiminezhad A, Davaran S, Rasoul-Amini S, Barar J, Moghadam M, Ghasemi

Y* (2012). Synthesis, characterization and anti-Listeria monocytogenes effect of

amino acid coated magnetite nanoparticles. Current Nanoscience. Vol: 8, 868-

874.

297) Moein M, Karami F, Tavallali H, Ghasemi Y (2012). Chemical composition of the

essential oil of satureja bachtiarica bunge. from Iran. Iranian Journal of

Pharmaceutical Sciences. Vol: 8(4), 277-281.

298) Yarizadeh A, Aram F, Niazi A, Ghasemi Y (2012). Evaluation of effect of β-lactam

antibiotics on suppression of different strains of Agrobacterium tumefaciens and

on wheat mature embryo culture. Iranian Journal of Pharmaceutical

Sciences.Vol: 8(4), 271-279.

299) Heiat M, Mohkam M, Akbari-Rad S, Yaali-Jahromi A, Eftekharei M, Ghasemi Y,

Sadraeian M (2012). Resuscitation of viable but non-culturable Escherichia coli,

using environmental shocks. European Journal of Experimental Biology.

Vol: 2(6), 2033-2037.

300) Ebrahiminezhad A, Ghasemi Y*, Rasoul-Amini S, Barar J, Davaran S (2012).

Impact of amino-acid coating on the synthesis and characteristics of iron-oxide

nanoparticles (IONs). Bulletin of the Korean Chemical Society. Vol: 33(12),

3957-3962.

301) Heiat M, Mohkam M, Akbari Rad S, Yaali Jahromi A, Eftekharei1 M, Ghasemi Y,

Sadraeian M (2012). Application of extreme environmental conditions to

resuscitation of viable but non culturable E. coli DH5α. European Journal of

Experimental Biology. Vol: 2 (6), 2033-2037.

Dr.Younes Ghasemi 40

302) Ghasemi Y*, Dabbagh F, Rasoul-Amini S, Borhani-Haghighi A, Morowvat MH.

(2012).The possible role of HSPs on Behçet’s disease: a bioinformatic approach.

Computers in Biology and Medicine. Vol: 42, 1079-1085.

303) Farasat A, Sadraeian M, Mohkam M, Akbari Rad S, Ghasemi Y, Esfandiary MA,

Rostamian M (2012). Identification of Candida albicans isolated from Recurrent

Vulvovaginal Candidiasis (RVVC) patients by PCR-RFLP method and its drug

sensitivity to Zataria multiflora extract. European Journal of Experimental

Biology.Vol: 2(6), 2004-2009.

304) Ghasemi Y*, Dabbagh F, Ghasemian A. (2012). Cloning of a fibrinolytic enzyme

(subtilisin) gene from Bacillus subtilis in Escherichia coli. Molecular

Biotechnology. Vol: 52, 1-7.

305) Ghasemi Y*, Shahbazi M, Rasoul-Amini S, Kargar M, Safari A, Kazemi A,

Montazeri-Najafabady N (2012). Identification and characterization of feather

degrading bacteria from keratin rich wastes. Annals of Microbiology. Vol: 62,

737-744.

306) Dabbagh F, Moradpour Z, Ghasemian A, Ghasemi Y (2012). Phylogeny of urate

oxidase producing bacteria: on the basis of gene sequences of 16S rRNA and

uricase protein. Iranian Journal of Pharmaceutical Sciences. Vol: 8(2), 99-

102.

307) Zamani N, Noshadi M, Amin S, Niyazi A, Ghasemi Y* (2012). Effect of alginate

structure and microalgae immobilization method on orthophosphate removal

from wastewater. Journal of Applied Phycology. Vol: 24, 649-656.

308) Khabnadideh S, Rezaei Z, Ghasemi Y, Montazery-Najafabady N (2012).

Antibacterial activity of some new azole compounds. Anti-Infective Agents in

medicinal Chemistry. Vol: 10, 26-33.

309) Ghasemi Y*, Rasoul-Amini S, Naseri AT, Montazery-Najafabady N, Mobasher

AM, Dabbagh F (2012). Microalgae biofuel potentials. Applied Biochemistry

and Microbiology. Vol:48(2), 126–144

310) Ghasemi Y*, Rasoul-Amini S, Morowvat MH (2011) Algae for the Production of

SCP, Bioprocess Sciences and Technology, 1st Edition, Nova Press, New York,

163-184.

Dr.Younes Ghasemi 41

311) Rezaei Z, Khabnadideh S, Ghasemi Y, Fadaei M, Karimi Z (2011) Design and one-

pot synthesis of α-aminophosphonates and antibacterial activity. Journal of

Pharmaceutical Negative Results. Vol: 2(2), 78-86.

312) Ghasemi Y*, Rasoul-Amini S, Ebrahiminezhad A, Kazemi A, Shahbazi M, Talebnia

N. (2011) Screening and isolation of extracellular protease producing bacteria

from the Maharloo salt lake. Iranian Journal of Pharmaceutical Sciences.

Vol: 7 (3), 175-180.

313) Ghasemi Y*, Rasoul-Amini S, Fotooh-Abadi E (2011) The Biotransformation,

biodegradation, and bioremediation of organic compounds by Microalgae.

Journal of Phycology. Vol: 47, 969-980.

314) Ghasemi Y*, Rasoul-Amini S, Kazemi A, Zarrini G, Morowvat MH, Kargar M

(2011) Isolation and Characterization of some moderatly halophilic bacteria with

lipase activity. Microbiology. Vol: 80(4), 483-487.

315) Ebrahiminezhad A, Rasoul-Amini S, Ghasemi Y* (2011) L-asparaginase production

by moderate halophilic bacteria isolated from Maharloo salt lake. Indian

Journal of Microbiology. Vol: 51(3), 307-311.

316) Rasoul-Amini S, Montazeri-Najafabady N, Mobasher MA, Hoseini-Alhashemi S,

Ghasemi Y* (2011) Chlorella sp.: A new strain with highly saturated fatty acids

for biodiesel production in bubble-column photobioreactor. Applied Energy.

Vol: 88, 3354-3356.

317) Zomorodian K, Moein MR, Rahimi MJ, Pakshir K, Ghasemi Y, Abedi S, Sharbatfar

S (2011). Possible application and chemical compositions of Carum copticum

essential oils against food borne and nosocomial pathogens. Middle-East

Journal of Scientific Research. Vol: 9(2),239-245

318) Rasoul-Amini S, Fotooh-Abadi E, Ghasemi Y* (2011). Biotransformation of

monoterpenes by immobilized microalgae. Journal of Applied Phycology. Vol:

23, 975-981.

319) Naseri TA, Rasoul-Amini S, Morowvat MH, Ghasemi Y* (2011). Single cell

protein: Production and process. American Journal of Food Technology. Vol:

6(2), 103-116.

Dr.Younes Ghasemi 42

320) Vahdani M, Faridi F, Zarshenas MM, Javadpour S, Abolhassanzadeh Z, Moradi N,

Bakzadeh Z, Karmostaji A, Mohagheghzadeh A, Ghasemi Y (2011). Major

compounds and antimicrobial activity of essential oils from five Iranian endemic

medicinal plants. Pharmacognosy Journal. Vol: 3(22), 48-53.

321) Ghasemi Y*, Mohagheghzadeh A, Ostovan Z, Moshavash M, Rasoul-Amini S,

Morowvat MH. (2010). Biotransformation of some monoterpenoid ketones by

Chlorella vulgaris MCCS 012. Chemistry of Natural Compounds. Vol: 46 (5),

734-737.

322) Moein MR, Karimi F, Tavallali H, Ghasemi Y (2010). Composition of the essential

oil of Rosa damascena. Iranian Journal of Pharmaceutical Sciences. Vol:

6(1), 59-62.

323) Ghasemi Y, Rasoul-Amini S, Ebrahiminezhad A, Zarrini G, Kazemi A, Mousavi-

Khorshidi S, Ghoshoon MB, Raee MJ (2010). Halotolerant amylase production

by a novel bacterial strain, Rheinheimera aquimaris. Research Journal of

Microbiology. Vol: 5(2), 144-149.

324) Rasoul-amini S, Ghasemi Y*, Morowvat MH, Ghoshoon MB, Raee MJ, Moasavi-

Azam MB, Shokravi S, Montazeri-Najafabady N, Nouri F, Parvizi R, Negintaji

N, Khoubani S (2010). Characterization of hydrocortisone bioconversion and

16S rRNA gene in Synechococcus nidulans cultures. Applied Biochemistry

and Microbiology.Vol: 46(2), 191-197.

325) Moein MR, Ghasemi Y, Moein S, Nejati M (2010). Analysis of antimicrobial,

antifungal and antioxidant activities of Juniperus excelsa essential oil.

Pharmacognosy Research. Vol: 2(3), 128-131.

326) Slessor KE, Stok JE, Cavaignac SM, Hawkes DB, Ghasemi Y, De Voss JJ (2010).

Cineole biodegredation: Molecular cloning, expression and characterisation of

(S)-6 beta hydroxycineole dehydrogenase from Citrobacter braakii. Bioorganic

Chemistry. Vol: 38, 81-86.

327) Mohaghegheghzadeh A, Faridi P, Ghasemi Y* (2010). Analysis of Mount Atlas

mastic smoke: A potential food preservative. Fitoterapia. Vol: 81, 577-580.

328) Morowvat MH, Rasoul-Amini S, Ghasemi Y* (2010). Chlamydomonas as a new

organism for biodisel production. Bioresource Technology. Vol: 101, 2059-

2062.

Dr.Younes Ghasemi 43

329) Ghasemi Y*, Rasoul-amini S, Morowvat MH, , Ghoshoon MB, Raee MJ, Khoubani

S, Negintaji N, Nouri F, Parvizi R (2009). C-20 Ketone Reduction of

Hydrocortisone by a rice field microalga Chlorella vulgaris MCCS 013.

Chemistry of Natural Compounds. Vol: 45(6), 824-828.

330) Ghasemi Y*, Peymani P, Afifi S (2009). Quantum dot: magic nanoparticle for

imaging, detection and targeting. Acta Biomedica. Vol: 80, 156-165.

331) Ghasemi Y*, Mohagheghzadeh A, Moshavash M, Ostovan Z, Rasoul-Amini S,

Morowvat MH, Ghoshoon MB, Raee MJ, Mosavi-Azam SB (2009).

Biotransformation of monoterpens by Oocystis pusilla. World Journal of

Microbiology and Biotechnology. Vol: 25, 1301-1304.

332) Rasoul-Amini S, Ghasemi Y*, Morowvat MH, Mohagheghzadeh A (2009). PCR

amplification of 18S rRNA, Single Cell Protein production and fatty acid

evaluation of some naturally isolated microalgae. Food Chemistry. Vol: 116,

129-136.

333) Ghasemi Y*, Ebrahiminezhad A, Rasoul-Amini S, Zarrini G, Ghoshoon MB, Raee

MJ, Morowvat MH, Kafilzadeh F, Kazemi A (2008). An optimized medium for

screening of L-asparaginase prodution by Escherichia coli. American Journal

of Biochemistry and Biotechnology. Vol: 4(4): 422-424.

334) Ghasemi Y*, Khalaj A, Mohagheghzadeh A, Khosravi A (2008). Composition and

in vitro antimicrobial activity of the essential oil of Achillea eriophora.

Chemistry of Natural Compounds.Vol: 44 (5): 663-665.

335) Ghasemi Y*, Rasoul-amini S, Morowvat MH, , Ghoshoon MB, Raee MJ, Nouri F,

Negintaji N, Parvizi R, Mosavi-Azam SB (2008). Characterization of

hydrocortisone biometabolites and 18S rRNA gene in Chlamydomonas

reinhardtii cultures. Molecules.Vol: 13 (10): 2416-2425.

336) Faridi P, Ghasemi Y*, Gholami A, Mehregan I, Mohagheghzadeh A (2008).

Antimicrobial essential oil from Smyrniopsis aucheri. Chemistry of Natural

Compounds. Vol: 44 (1): 116-118.

337) Ghasemi Y*, Rasoul-amini S, Morowvat MH, Moasavi-Azam SB, Shokravi S,

Mohagheghzadeh A, Ghoshoon MB, Raee MJ (2008). Bioconversion of

Dr.Younes Ghasemi 44

hydrocrtisone by unicellular microalga Oocystis pusilla. Biotechnology. Vol: 7

(2): 293-298.

338) Ghasemi Y*, Faramarzi MA, Arjmand M, Mohagheghzadeh A, Shokravi S,

Morowvat MH, (2007). Side-chain cleavage and C-20 ketone reduction of

hydrocortisone by a natural isolate of Chroococcus dispersus. Annals of

Microbilogy. Vol: 57 (4): 577-581.

339) Ghasemi Y*, Khalaj A, Mohagheghzadeh A, Khosravi A Morowvat MH (2007).

Composition and antimicrobial activity of the essential oil and extract of

Hypericum elongatum . Journal Applied Sciences. Vol: 7 (18): 2671-2675.

340) Soltani N, Zarrini G, Ghasemi Y*, Shokravi S (2007). Characterization of a soil

cyanobacterium Fischerella sp. FS18 under NaCl stress. Journal of Biological

Sciences. Vol: 7(6): 931-936.

341) Ghasemi Y*, Moradian A, Mohagheghzadeh A, Shokravi S, Morowvat MH. (2007).

Antifungal and antibacterial of the microalgae collected form paddy fields of

Iran: chracterization of antimicrobaial activity of Chroococcus dispersus.

Journal of Biological Sciences. Vol: 7(6): 904-910.

342) Mohagheghzadeh A, Faridi P, Ghasemi Y*, (2007). Carum copticum, essential oil

chemotypes. Food chemistry. Vol: 100: 1217-1219.

343) Mohagheghzadeh A, Fraridi P, Shams-Ardakani M, Ghasemi Y* (2006). Medicinal

smokes. Journal of Ethnopharmacology. Vol: 108(2): 161-184.

344) Faramarzi MA, Tabatabaei Yazdi M, Ghasemi Y*, Ghostinroudi H, Amini

M,Jahandar H, (2006). Nostoc muscorum: a regioselective biocatalyst for 17-

carbonyl reduction of androst-4-en-3,17-dione and androst-1,4-dien-3,17-dione.

Annals of Microbilogy. Vol: 56(3): 253-256.

345) Ghasemi Y*, Tabatabaei Yazdi M, Dehshahri A, Niknahad H, Shokravi S, Amini

M, Ghasemian A, Faramarzi MA (2006). Algal transformation of hydrocortisone

by the cyanobacterium Nostoc ellipsosporum. Chemistry of Natural

Compounds. Vol: 42 (6): 702-705.

346) Moradpour Z, Torshabi M, Faramarzi MA, Tabatabaei Yazdi M, Ghasemi Y*,

Jahandar H, Zolfaghari N, Zarrini G (2006). Microbial transformation of

Dr.Younes Ghasemi 45

androst-4-en-3,17-dione by Nostoc ellipsosporum. Research Journal of

Microbiology. Vol: 1 (3): 289-293.

347) Tabatabaei Yazdi M, Ghasemi Y*, Ghasemian A, Shokravi S, Niknahad H, Amini

M, Faramarzi MA (2005). Bioconversion of hydrocortisone by cyanobacterium

Fischerella ambigua PTCC 1635. World Journal of Microbiology and

Biotechnology. Vol: 21, 811-814.

348) Ghasemi Y*, Faridi P, Mehregan I, Mohagheghzadeh A (2005). Ferula gummosa

fruits; an aromatic antimicrobial agent.Chemistry of Natural Compounds. Vol:

41(3), 311-314.

349) Tabatabaei Yazdi M, Arabi H, Faramarzi MA, Ghasemi Y*, Amini M, Shokravi S,

Aziz Mohseni F (2004). Biotransformation of hydrocortisone by a natural isolate

of Nostoc muscorum. Phytochemistry. Vol: 65, 2205-2209

350) Ghasemi Y*,Tabatabaei Yazdi M, Shafiee A, Amini M, Shokravi S, Zarrini G.

(2004). Parsiguine, A novel antimicrobial substance from Fischerella ambigua

PTCC 1635. Pharmaceutical Biology. Vol: 42(4-5), 318-322.

351) Ghasemi Y*, Tabatabaei Yazdi M, Shokravi S, Soltani N, Zarrini G (2003).

Antifungal and antibacterial activity of paddy-fields cyanobacteria from the

north of Iran. Journal of Sciences. Vol: 14(3), 203-209.

Conference presentations/Abstracts : 275

Genes and Nucleotide sequences: 360 genes published at Pubmed (NCBI)

Book:

1- Faramarzi MA, Ghasemi Y, Zarrini G, Mohagheghzadeh A, Nafissi-Varcheh N (2007)

Biotechnology and its application in pharmacy (Translated in Persian). Rahekamal

Publisher, 1st Edition, Tehran, Iran.

Dr.Younes Ghasemi 46

2- Zarrini G, Ghasemi Y, Karimzadeh I, Rahimi HR, Namvaran MM (2014) Molecular

Farming (Translated in Persian). Tabriz University Press, 1st Edition, Tabriz, Iran.

3- Mohkam M, Nezafat N, Berenjian A ,Negahdaripour M, Behfar A, Ghasemi Y*

(2017). Role of Bacillus Genus in the production of value-added

compounds. Bacilli and Agrobiotechnology, 1-33, 1st Edition, Springer,

Netherlands.