Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic...

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COMMONWEALTH OF AUSTRALIA Copyright regulations 1969 Warning This material has been reproduced and communicated to you by or on behalf of the University of Melbourne pursuant to part VB of the Copyright Act 1968 (the Act). The material in this communication may be subject to copyright under the act. Any further copying or communication of this material by you may be the subject of copyright protection under the act. Do not remove this notice

Transcript of Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic...

Page 1: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

COMMONWEALTH OF AUSTRALIA

Copyright regulations 1969

Warning

This material has been reproduced and communicated to you by or on behalf of the University of Melbourne pursuant to part

VB of the Copyright Act 1968 (the Act).

The material in this communication may be subject to copyright under the act. Any further copying or communication

of this material by you may be the subject of copyright protection under the act.

Do not remove this notice

Page 2: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Opportunistic Infections

Page 3: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Objectives

• To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution of host factors to infection, and (3) the reasons for the increased susceptibility of hospitalised patients to infection

• To illustrate some principles of bacterial pathogenesis and molecular epidemiology, using the opportunistic pathogen, Pseudomonas aeruginosa, as an example.

Page 4: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Microbial pathogenicity vs . Host resistance

colonisation

penetration

multiplication

tissue damage

physical and chemical barriers

inflammatory response phagocytosis

adaptive immune response

disease or protection

Pathogen-Host Relationships

Page 5: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

disease threshold

Microbial Virulence

Host Resistance

How Microbial Virulence and Host Resistance Affect Disease Outcome

Page 6: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• E. coli • Staphylococcus aureus • Klebsiella pneumoniae • Enterococcus spp. • Pseudomonas aeruginosa • Enterobacter spp. • Serratia spp. • Proteus spp. • Clostridium difficile

Frequently Encountered Opportunistic Pathogens: “The Seed”

* may cause nosocomial epidemics

* * * * * *

Page 7: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• Local • anatomical defects

• surgical and other wounds

• burns

• catheterisation (bladder, IV)

• foreign bodies in general

Host Factors: “The Soil”

Page 8: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• Systemic • extremes of age • leucopenia • malignancy • malnutrition • diabetes • liver disease • certain infections • treatment with antimicrobials • primary (congenital) immunodeficiency

Host Factors (cont.)

Page 9: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

AO

Page 10: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• wound infection

• UTI

• intra-abdominal infection

• pneumonia

• septicaemia (sepsis)

• meningitis (esp. neonates)

Types of Infection

Page 11: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• endogenous (own microbiota)

• exogenous

Sources

Page 12: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Culture appropriate specimen: • wound swab

• pus

• urine

• sputum

• blood

• CSF

• etc.

Diagnosis

Page 13: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• Depends on antibiotic susceptibility

• nosocomial strains are often multiresistant

• may need potent bactericidal agents

Treatment

Page 14: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

• Aseptic technique (esp. hand hygiene)

Prevention

Page 15: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Education

Page 16: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Pseudomonas

• G− rod

• Motile

• Aerobes or facultative anaerobes

• Non-fermenting, non-sporing

• Some species, incl. Ps. aeruginosa, produce pigments

• Widespread

• Low nutritional requirements

Page 17: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Morphology of Pseudomonas aeruginosa

Colonies on nutrient agar Gram stain of culture

AO

Page 18: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Classification

• Divided into species according to:

• Biochemical tests

• Ps. aeruginosa subtyped according to:

• Serotype, biotype (seldom used)

For epidemiological studies, generally use

• RFLP or MLST (multilocus sequence typing)

Page 19: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Pulsed-Field Gel Electrophoresis of Genomic DNA of Ps. aeruginosa Isolates from Children with Cystic Fibrosis

1 2 3 4 5 6 7 8 9 10 11 12 kb

500-

400-

300-

200-

100-

50-

AO

Page 20: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Species of Pseudomonas and Related Genera

• Ps. aeruginosa* : ubiquitous saprophyte, important opportunistic pathogen

• Burkholderia cepacia* : opportunistic pathogen

• Stenotrophomonas maltophilia* : opportunistic pathogen

• Burkholderia pseudomallei : causes melioidosis

* These species often colonise the respiratory tract of patients with cystic fibrosis, and are intrinsically resistant to many commonly-used antibiotics

Page 21: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Pseudomonas aeruginosa : overview

• Epidemiology

• Diseases

• Pathogenesis (incl. biofilms and quorum sensing)

• Principles of management

Page 22: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa : epidemiology

• Widespread in nature, esp. in moist environments

• Transiently colonises skin, mucous membranes, git

• A leading nosocomial pathogen:

• previously assoc. with burns, febrile neutropenia

• now mainly pneumonia, UTI, sepsis

• Major problem in patients with cystic fibrosis

Page 23: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa : epidemiology (cont.)

• Infections mostly acquired from environment

• Spread in hospital on hands and fomites

• Some strains spread between patients with CF

• All strains are intrinsically resistant to many antibiotics and weak disinfectants

• Resistance also readily acquired from other bacteria

Page 24: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa : diseases

• Superficial infections: • Skin: wound infection, otitis externa, folliculitis

• Eye: keratitis, corneal ulcer, (also deep infection)

• Deep and systemic infections: • Pulmonary: nosocomial pneumonia, chronic

infection in patients with cystic fibrosis

• Other: UTI, endocarditis, osteomyelitis, septicaemia, etc. in immunocompromised patients

Page 25: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa Pathogenesis (1): Adhesion and Invasion

• Does not invade intact skin unless very large numbers

• Adheres weakly to intact epithelium via flagella, pili, LPS

• As with other bacteria, LPS and flagellin bind to Toll-like receptors: affect cytokine production

• LPS core binds to CFTR (CF transmembr. conductance reg.)

• Once adherent, bacteria tend to produce biofilm

• Capsule assists adherence and biofilm formation

Page 26: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Properties of Ps. aeruginosa in Biofilms

• Non-motile

• More capsule material - mucoid phenotype

• More adherent

• Less invasive

• Shorter LPS (no O-antigen)

• Slowed growth

• Increased resistance to antibiotics

Much of this results from the activation of genes that are regulated by quorum sensing

Page 27: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

response to environmental signals

Bacterial “cross-talk” (= quorum sensing)

Stages in Biofilm Formation

primary-plus.com

Page 28: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

An Example of How Quorum Sensing Works

Broth culture of light- emitting bacteria at

high cell density

B. Bassler

Page 29: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

An Example of How Quorum Sensing Works

low cell

density

autoinducer

LuxR LuxR

LuxI

luxR lux

box luxI luxC D A B E

autoinducer

high cell

density

autoinducer

LuxR LuxR

LuxI

luxR lux box luxI luxC D A B E

autoinducer

LuxR

Light

AO

Page 30: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Properties of Ps. aeruginosa in Biofilms

• Non-motile

• More capsule material - mucoid phenotype

• More adherent

• Less invasive

• Shorter LPS (no O-antigen)

• Slowed growth

• Increased resistance to antibiotics

Page 31: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa Pathogenesis (2): Spread and Multiplication

Spread through tissues and body facilitated by:

• Reduced PMNs

• Flagella

• Exoezymes: proteases, haemolysins, phospholipases, elastase. Act on pulmonary tissue and surfactant

• Exotoxins: exotoxin A; exoenzymes S and U (EXoS, ExoU), etc. Inhibit phagocytosis

• LPS-CFTR-mediated invasion: aggravates corneal damage

Page 32: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

What Happens in Patients with Cystic Fibrosis?

• Defect in CFTR → abnormal ion transport, thickened mucus and impaired mucociliary function

• Pseudomonas and Staph not inhibited by high salt concs.

• Bacteria in biofilms resist mechanical removal and are less visible to the innate immune system

• DNA secreted by bacteria and released from dying cells → thickened mucus

• Type of host antibody response may affect outcome.

Page 33: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa Pathogenesis (3): Tissue Damage

Type III secreted proteins • Exoenzymes S, T, U and Y (=ExoS, ExoT, ExoU, ExoY):

act on various host cell targets to interfere with phagocytosis and enhance cytokine production

Other Exotoxins and Enzymes • Exotoxin A: blocks protein synthesis (≡ diphtheria toxin)

• Elastase: damages connective tissue

• Phospholipase: damages cell membranes, degrades surfactant

Page 34: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa : Control

• Reduce risk of susceptible patients by suitable management of burns, neutropenia, catheters, ventilators

• Be on alert for infection and treat early

• Practice high levels of hand hygiene

• Use contact lenses and solutions appropriately

• Lifelong monitoring and treatment of CF patients

Pseudomonas cannot be eradicated from the environment. Therefore management is directed towards prevention.

Page 35: Copyright regulations 1969 Warning€¦ · Objectives •To appreciate the nature of opportunistic infections by understanding (1) the nature of opportunistic pathogens, (2) the contribution

Ps. aeruginosa : Summary

• Ps. aeruginosa is widespread in the environment

• Its low nutritional requirements and genetic versatility allow it to occupy many different environments

• It is a prototypical opportunistic pathogen and a leading cause of hospital-acquired infections

• In humans, it shows a preference for situations where innate immunity is reduced

• Its intrinsic and acquired resistance to antimicrobials provide a therapeutic challenge

• Prevention is the key to controlling infection