Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual...

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Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous, Melania Ru’aini, Philip Winter, Matthew Hamilton, Pierre Boulanger, Andriy Kovalenko, Michael J. Ellison Biophysical Journal Volume 94, Issue 10, Pages 3748-3759 (May 2008) DOI: 10.1529/biophysj.107.116053 Copyright © 2008 The Biophysical Society Terms and Conditions

Transcript of Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual...

Page 1: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm 

Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous, Melania Ru’aini, Philip Winter, Matthew Hamilton, Pierre Boulanger, Andriy Kovalenko, Michael J. Ellison 

Biophysical Journal Volume 94, Issue 10, Pages 3748-3759 (May 2008)

DOI: 10.1529/biophysj.107.116053

Copyright © 2008 The Biophysical Society Terms and Conditions

Page 2: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 1

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 3: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 2

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 4: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 3

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 5: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 4

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 6: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 5

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 7: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 6

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions

Page 8: Coarse-Grained Molecular Simulation of Diffusion and Reaction Kinetics in a Crowded Virtual Cytoplasm Douglas Ridgway, Gordon Broderick, Ana Lopez-Campistrous,

Figure 7

Biophysical Journal 2008 94, 3748-3759DOI: (10.1529/biophysj.107.116053) Copyright © 2008 The Biophysical Society Terms and Conditions