CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS · IV session: Methodology of genomics ......

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Tartu, Estonia, May 16-17, 2018 Venue: Institute of Molecular and Cell Biology, University of Tartu, Omicum building, Riia 23b/2, auditorium 105 Workshop of H2020-TWINN-2015 WIDENLIFE project (Grant No 692065) and ePerMed project (Grant No 692145) Wednesday, May 16, 2018 10:00-10:30 Welcome coffee 10:30 Opening words, Professor Ants Kurg, University of Tartu I session: Population genetics 10:40-11:25 Anna-Sapfo Malaspinas , PhD, University of Lausanne “Inferring demographic history with multidimensional scaling” 11:25-12:10 Margus Tiru , Msc, Positium LBS Llc “Use of location big data from telecom operators for spatiotemporal behavior research” 12:10-12:55 Mait Metspalu , PhD, University of Tartu “Using large scale genomic data to reconstruct demographic history” 12:55-14:15 Lunch break II session: Big data in genomics 14:15-15:00 Cecilia Lindgren , PhD, University of Oxford “Leveraging Big Data to Dissect Common, Complex Metabolic Traits” 15:00-15:45 Andrew Morris , PhD, University of Liverpool “Leveraging large-scale genome-wide association studies in diverse populations to advance understanding of the genetic contribution to type 2 diabetes susceptibility” 15:45-16:05 Coffee break 16:05-16:50 Matti Pirinen , PhD, University of Helsinki “Finemapping” Thursday, May 17, 2018 09:00-09:30 Welcome coffee III session: Imaging analysis 09:30-10:15 Christoffer Nellåker , PhD, University of Oxford “Electronic phenotyping from images - big data biology” 10:15-11:00 Peter Claes , PhD, KU Leuven “Imaging genetics of the human face” 11:00-11:45 Kaur Alasoo , PhD, University of Tartu “Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response“ 11:45-13:00 Lunch break IV session: Methodology of genomics 13:00-13:45 Matthew Robinson , PhD, University of Lausanne “Designing Bayesian learning models for large datasets” 13:45-14:30 Reedik Mägi , PhD, University of Tartu “Multiphenotype analysis” 14:30-14:50 Coffee break V session: Data mining 14:50-15:35 Aiden Doherty , PhD, University of Oxford “Statistical machine learning of physical activity and sleep from sensor data and their genetic determinants” 15:35-16:20 Yves Moreau , PhD, KU Leuven “Large-scale matrix factorization in drug discovery and precision medicine” 16:20-17:05 Sulev Reisberg, MSc, University of Tartu “Electronic health records and data mining” Closing remarks CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS PROGRAMME: Funded by the European Union through the Coordination and Support Action of the H2020 programme under grant agreement No 692065 „Widening the Scientific Excellence for Studies on Women’s and Fetal Health and Wellbe- ing“, No 692145 “Rise of scientific excellence and collaboration for implementing personalised medicine in Estonia” and European Regional Development Fund through University of Tartu ASTRA project PER ASPERA, Graduate School of Biomedicine and Biotechnology (2014-2020.4.01.16-0027) European Union European Regional Development Fund Investing in your future The participation is for free Registration until May 7 and additional information on webpage: https://sisu.ut.ee/widenlife GENERAL CONTACT: Prof. Ants Kurg Institute of Molecular and Cell Biology University of Tartu Riia 23, 51010 Tartu, Estonia [email protected] Phone: +372 7375018 PROGRAMME CONTACT: Dr Reedik Mägi Institute of Genomics University of Tartu Riia 23 b/2, 51010 Tartu, Estonia [email protected] Phone: +372 7374045

Transcript of CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS · IV session: Methodology of genomics ......

Page 1: CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS · IV session: Methodology of genomics ... CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS PROGRAMME: Funded by the European Union

Tartu, Estonia, May 16-17, 2018Venue: Institute of Molecular and Cell Biology, University of Tartu, Omicum building, Riia 23b/2, auditorium 105

Workshop of H2020-TWINN-2015 WIDENLIFE project (Grant No 692065) and ePerMed project (Grant No 692145)

Wednesday, May 16, 2018

10:00-10:30 Welcome coffee

10:30 Opening words, Professor Ants Kurg, University of Tartu

I session: Population genetics10:40-11:25 Anna-Sapfo Malaspinas, PhD, University of Lausanne

“Inferring demographic history with multidimensional scaling”

11:25-12:10 Margus Tiru, Msc, Positium LBS Llc“Use of location big data from telecom operators for spatiotemporal behavior research”

12:10-12:55 Mait Metspalu, PhD, University of Tartu“Using large scale genomic data to reconstruct demographic history”

12:55-14:15 Lunch break

II session: Big data in genomics14:15-15:00 Cecilia Lindgren, PhD, University of Oxford

“Leveraging Big Data to Dissect Common, Complex Metabolic Traits”

15:00-15:45 Andrew Morris, PhD, University of Liverpool“Leveraging large-scale genome-wide association studies in diverse populations to advance understanding of the genetic contribution to type 2 diabetes susceptibility”

15:45-16:05 Coffee break

16:05-16:50 Matti Pirinen, PhD, University of Helsinki “Finemapping”

Thursday, May 17, 2018

09:00-09:30 Welcome coffee

III session: Imaging analysis09:30-10:15 Christoffer Nellåker, PhD, University of Oxford

“Electronic phenotyping from images - big data biology”

10:15-11:00 Peter Claes, PhD, KU Leuven “Imaging genetics of the human face”

11:00-11:45 Kaur Alasoo, PhD, University of Tartu “Shared genetic effects on chromatin and gene expression indicate a role for enhancer priming in immune response“

11:45-13:00 Lunch break

IV session: Methodology of genomics13:00-13:45 Matthew Robinson, PhD, University of Lausanne

“Designing Bayesian learning models for large datasets”

13:45-14:30 Reedik Mägi, PhD, University of Tartu “Multiphenotype analysis”

14:30-14:50 Coffee break

V session: Data mining14:50-15:35 Aiden Doherty, PhD, University of Oxford

“Statistical machine learning of physical activity and sleep from sensor data and their genetic determinants”

15:35-16:20 Yves Moreau, PhD, KU Leuven “Large-scale matrix factorization in drug discovery and precision medicine”

16:20-17:05 Sulev Reisberg, MSc, University of Tartu“Electronic health records and data mining”

Closing remarks

CHALLENGES AND OPPORTUNITIES IN BIG DATA ANALYSIS

PROGRAMME:

Funded by the European Union through the Coordination and Support Action of the H2020 programme under grant agreement No 692065 „Widening the Scientific Excellence for Studies on Women’s and Fetal Health and Wellbe-ing“, No 692145 “Rise of scientific excellence and collaboration for implementing personalised medicine in Estonia” and European Regional Development Fund through University of Tartu ASTRA project PER ASPERA, Graduate School of Biomedicine and Biotechnology (2014-2020.4.01.16-0027)

European UnionEuropean Regional Development Fund

Investingin your future

The participation is for freeRegistration until May 7 and additional information on webpage: https://sisu.ut.ee/widenlife

GENERAL CONTACT:

Prof. Ants Kurg

Institute of Molecular and Cell Biology

University of Tartu

Riia 23, 51010 Tartu, Estonia

[email protected]

Phone: +372 7375018

PROGRAMME CONTACT:

Dr Reedik Mägi

Institute of Genomics

University of Tartu

Riia 23 b/2, 51010 Tartu, Estonia

[email protected]

Phone: +372 7374045