c101 1 lecturenotes chapter1 Foster - California State … ·  · 2013-09-27•Removing the bark...

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9/22/09 1 © 2008 Brooks/Cole 1 Chapter 1: The Nature of Chemistry © 2008 Brooks/Cole 2 Consider the anticancer drug Taxol®. Why Care about Chemistry? © 2008 Brooks/Cole 3 Molecular Medicine Pacific yew bark extract has cancer-fighting properties. Chemists: Isolated the active chemical: Paclitaxel Determined its formula: C 47 H 51 NO 14 . Determined its structure: One of two parts of paclitaxel (Taxol®) Ball-and-stick model Space-filling model © 2008 Brooks/Cole 4 Molecular Medicine Pacific yew is a poor drug source. Removing the bark kills the tree. Six 100-year-old trees are used to treat each patient. Another source was needed. A chemical in English-yew needles can be converted into paclitaxel. English yew is common and fast growing. Needles can be harvested without killing the tree. © 2008 Brooks/Cole 5 Molecular Medicine Paclitaxel hinders cell division • Cancerous cells multiply faster than normal cells. Why does the drug work? • It prevents microtubule breakdown. • It binds in a pocket in tubulin. Other drugs have been designed to fill the tubulin pocket more effectively. • Compound “13a” is similar, but more effective. © 2008 Brooks/Cole 6 How Science is Done

Transcript of c101 1 lecturenotes chapter1 Foster - California State … ·  · 2013-09-27•Removing the bark...

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© 2008 Brooks/Cole 1

Chapter 1: The Nature of Chemistry

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Consider the anticancer drug Taxol®.

Why Care about Chemistry?

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Molecular Medicine Pacific yew bark extract has cancer-fighting properties. Chemists: •  Isolated the active chemical: Paclitaxel •  Determined its formula: C47H51NO14. •  Determined its structure:

One of two parts of paclitaxel

(Taxol®)

Ball-and-stick model Space-filling model

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Molecular Medicine Pacific yew is a poor drug source. •  Removing the bark kills the tree. •  Six 100-year-old trees are used to treat each

patient.

Another source was needed. •  A chemical in English-yew needles can be

converted into paclitaxel. •  English yew is common and fast growing. •  Needles can be harvested without killing the tree.

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Molecular Medicine Paclitaxel hinders cell division • Cancerous cells multiply faster than normal cells.

Why does the drug work? •  It prevents microtubule breakdown. •  It binds in a pocket in tubulin.

Other drugs have been designed to fill the tubulin pocket more effectively. • Compound “13a” is similar, but more effective.

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How Science is Done

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How Science is Done

Compound “13a” is twenty times more effective than paclitaxel in killing ovarian cancer cells.

Extracts from Pacific-yew bark kill cancer cells.

Qualitative or Quantitative?

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How Science is Done

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Examples Temperature Pressure Mass Volume State (solid, liquid, or gas)

Physical properties can be measured without changing the composition of a substance.

Melting point Boiling point Density Color Shape of crystals

Identifying Matter: Physical Properties

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Physical Change

– physical state may change. e.g. ice melting (solid water → liquid water).

– gross shape may change. e.g. a lump of lead hammered into a sheet.

–  size may change. e.g. a piece of wood is cut in two.

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T (°F) T (°C) Water freezes 32 0 Water boils 212 100 Normal body T 98 37

•  E transfers from high-T to low-T objects.

T is often given in degrees Fahrenheit (°F) in the U.S. The rest of the world uses degrees Celsius (°C).

Physical Change

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Temperature

or T (°C) = [T (°F) – 32] x

and T (°F) = [T (°C)] + 32

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T (°C) = [T (°F) – 32] x 100 180

water freezes

100 steps

0°C

100°C

32°F

212°F

water boils

180 steps

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Physical property.

density =

Density

mass Volume

Density at 20°C Substance d (g/mL) ethanol 0.789 water 0.998 magnesium 1.74 aluminum 2.70 titanium 4.50 copper 8.93 lead 11.34 mercury 13.55 gold 19.32

m V

d =

Water, copper and mercury

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A piece of metal has mass = 215.8 g. It is placed into a measuring cylinder and it displaces 19.1 mL of water. Identify the metal.

= 11.3 g/mL = 215.8 g 19.1 mL

d = m V

Probably lead.

Density at 20°C Substance d (g/mL)

magnesium 1.74 aluminum 2.70 titanium 4.50 copper 8.93 lead 11.34 mercury 13.55 gold 19.32

Density

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Dimensional Analysis

m = V x d 13.55 g 1 mL

= 3274 mL x

desired units known units

known units x = desired units

= 4.436 x 104 g

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Dimensional Analysis Since 1 lb = 453.59 g we can write:

453.59 g 1 lb

= 1

453.59 g 1 lb

2000. lb x = 9.072 x 105 g

Multiplication by 1! The quantity doesn’t change – just the units!

1 lb 453.59 g

= 1 and

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sucrose carbon + water heat

Sucrose will caramelize, then turn to carbon on heating.

Chemical Properties

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(b)  Fuels in the space shuttle (hydrogen and oxygen) combine to give water and provide energy to lift the shuttle into space.

Describe the change as a chemical or physical:

(c) An ice cube in your glass of lemonade melts.

(a) A cup of household bleach changes the color of your favorite T-shirt from purple to pink.

Question for Review and Thought: 29

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Classifying Matter: Substances & Mixtures

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Sample heterogeneous homogeneous

blood air apple oil & vinegar dressing milk filtered ocean water

Classifying Matter: Substances & Mixtures

Blood appears homogeneous to the unaided eye, but not under a microscope.

“Homogenized” milk appears homogeneous, but not under a microscope.

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Mixtures can be separated by physical methods. e.g. magnetic separation of iron filings from sulfur powder.

Separation and Purification

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Classifying Matter: Elements & Compounds

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Types of Matter Matter (may be solid, liquid, or gas): anything that occupies space and has mass

Homogeneous matter: uniform composition throughout

Heterogeneous matter: nonuniform composition

Substances: fixed composition; cannot be further purified

Solutions: homogeneous mixtures; uniform compositions that may vary widely

Elements: cannot be subdivided by chemical or physical changes

Compounds: elements united in fixed ratios

Physically separable into

Physically separable into

Chemically separable into

Combine chemically to form

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Nanoscale Theories and Models

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Metric Units

Prefix Meaning Example

kilo k 103 1 kilometer (km) = 1 x 103 meter (m) deci d 10-1 1 decimeter (dm) = 1 x 10-1 m centi c 10-2 1 centimeter (cm) = 1 x 10-2 m milli m 10-3 1 millimeter (mm) = 1 x 10-3 m micro µ 10-6 1 micrometer (µm) = 1 x 10-6 m nano n 10-9 1 nanometer (nm) = 1 x 10-9 m pico p 10-12 1 picometer (pm) = 1 x 10-12 m

A decimal system. Prefixes multiply or divide a unit by multiples of ten.

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States of Matter: Solids, Liquids & Gases

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States of Matter: Solids, Liquids & Gases

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The Atomic Theory

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•  Elements have unique names and symbols.   From people, places, mythology…

•  Symbols start with a capital letter.   Extra letters are lower-case.

•  Most symbols are obvious abbreviations •  Helium = He Hydrogen = H •  Titanium = Ti Zinc = Zn

•  “Old”-element symbols come from ancient names. •  Gold = Au (aurum) Tin = Sn (stannum) •  Silver = Ag (argentum) Lead = Pb (plumbum)

The Chemical Elements

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Element/symbol Discovery Origin of Name

Carbon (C) ancient L. carbo (charcoal)

Curium (Cm) Seaborg et al. In honor of Marie and Pierre Curie 1944 Nobel prize winners

Hydrogen (H) Cavendish Gr. hydro (water) + genes (maker) 1766

Mercury (Hg) ancient Mythology: messenger of the gods Gr. hydrargyrum (liquid silver)

Titanium (Ti) Gregor L. Titans (1st sons of the earth) 1791

Neon (Ne) Ramsay & Travers Gr. neos (new) 1898

Polonium (Po) M. & P. Curie In honor of Poland 1898

The Chemical Elements

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Types of Elements More than 110 elements are currently known

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Types of Elements

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•  boron silicon germanium •  arsenic antimony tellurium.

They exhibit metallic and nonmetallic properties:

•  Look like metals (shiny). •  Conduct electricity (not as well as metals).

  semiconductors.

Types of Elements

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Elements that Consist of Molecules

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Different forms of an element (same phase, same T, P)

Oxygen (gas):   O2 (oxygen)   O3 (ozone)

Carbon (solid):   C (diamond)   C (graphite)   C60 (buckminsterfullerine) & other fullerines   C (nanotubes)

Allotropes

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Allotropes

Graphite Diamond

Buckminsterfullerine

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Communicating Chemistry: Symbolism

sucrose carbon + water C12H22O11(s) 12 C(s) + 11 H2O(g) heat

C12H22O11(s) CH3OH(l) NaCl(s) sucrose methanol table salt