Brenda Poulter International Applications Specialist Thailand November 2004.
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Transcript of Brenda Poulter International Applications Specialist Thailand November 2004.
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Brenda PoulterInternational Applications Specialist
ThailandNovember 2004
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Agenda
• Overview of SciFinder Content– Databases– Currency
• Search Examples– Topic– Author– Structure
• Additional topics and Hands on practice
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Databases of SciFinder
• CAplus
• CASREACT
• CHEMCATS
• CHEMLIST
• MEDLINE/OLD MEDLINE
• REGISTRY
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CAplus
• A CAS literature database containing references to research published in journals, patents, and other sources
• Contains Bibliographic, Abstract and Indexing Information – all searchable
• 1907 to present (some 1800’s)• Over 23,650,000 records • Updated daily
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Medline/Old Medline
• A literature database containing references to Medical research published in journals
• Contains Bibliographic, Abstract and Indexing Information – all searchable
• 1953 to present• About 14,500,00 references• Updated 4 times per week
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Registry
• Substance Database containing CAS RN, Structures, Chemical Names, Properties, Sequences
• 1957 to present
• Over 73 Million substances
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CASREACT
• Database of Reactions
• 1840 to present
• 8,517,229 Single- and multi-step reactions
• Search full or half reactions
• Search Reactants, Reagents, Products, catalysts, any Role
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CHEMCATS
• Quickly and easily obtain current information on commercially available chemicals and their worldwide suppliers
• More than 8.1 million products – 734 suppliers– 834 catalogs
• Updated upon receipt of new catalog
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CHEMLIST
• Regulatory information from 19 Government Regulatory lists around the world
• 235,034 Inventoried/regulated substances
• Updated Weekly
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Sources of SciFinder
• Over 9,000 journals monitored • Patents (50 patent organizations)• Technical disclosures • Conference proceedings • Technical reports • Books • Dissertations • Reviews • Meeting abstracts • Web preprints • IP.com Journal • Electronic-only journals • etc
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Currency of SciFinder
• Updated Daily
• 1829 Core Journals (over 9000 total)– Bib and abs data within 5 days of receipt– Fully indexed within 21-28 days
• 7 core patent organizations (50 total)– Bib and abs data within 2 days of publication– Fully indexed within 27 days
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SciFinder Improves the Process
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SciFinder Saves Time
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SciFinder Provides Current Information
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SciFinder Exposes New Research
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SciFinder Makes Searching Easy
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Explore Topics
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Searching by Company/Organization
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Chiang Mai Search Results
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Limitation by Author
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Analysis by topics of Interest
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Index term analysis
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Get Related Information
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Get Related feature
• Starting your search from a text explore
• Obtain all the substances indexed in the reference list– Answer set must be <1000 references– Refine with structure fragments or calculated
properties
• Obtain the older cited references or forward citing references– Answer set must be <500 references
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Citation searching• The CAplus database includes citations
from journal and patent references– Only from 1998-present
• 1997 is in progress
– From roman script sources– Over 100 million citations
• Older references can be searched as citing references– Results limited to 1998-present
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Author Search
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Author Candidates
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Full Text Patent
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Citing References
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Analysis of those who referenced paper
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Better substance searching• Pharmaceutical compounds are seldom
simple neutral compounds• Beware that salts and mixtures may have
their own CAS Registry number• Better to search known compound as an
exact structure that as a name– Includes different stereoisomers, salts and
mixtures
• Can copy/paste a CAS Registry to import the structure
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Explore by Structure Search
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Explore by Structure Search
Additional options allow for The inclusion or exclusion ofCertain substance classes.
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Explore by Structure Search
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Analyze and Refine
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Analyze features
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Analyze Features
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Refine Substances
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Explore by Structure Search
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Styrene-Isoprene polymers
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With additional components: 573
Not possible to limit the maximum number of components
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Without addl. components: 22
May include some oligomers and radio-labeled compounds
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Searching by MF
• For addition polymers and most condensation polymers put the molecular formula of the monomers, separated by dots, within brackets and close with an “X”– (C8H8)x for styrene homopolymer– (C8H8 . C5H8)x for styrene-isoprene polymers
• For structural repeating units of symmetric condensation polymers put the formula of the repeating unit within brackets and close with an “N”– (C14H12O4)n for polybutylene terephthalate– (C2H4O)nCH4O for -methyl--hydroxy PE
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Results for (C8H8 . C5H8)x
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Coordination CompoundsMolecular Weight
Easily search coordinationcompounds with either a molecular weight or a structure.
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Coordination Compounds Structure and Refinement
The additional optionsbutton allows for refinement of answers prior to the search.
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References to Related Structures
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Reaction Searching
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Limiting Reaction Results
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Reaction Results Screen
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Retro Synthesis and Additional Information
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Reaction Searching with functional Groups
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Reactions Containing Phenol
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View Change of Reaction Answers
Reaction view may be changed.
View / One reaction per reference.
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Grouped Reaction Answer
Reactions may be viewed as one representative reaction per reference. To see all reactions in the reference, click on link
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Searching by substance name
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Behind the Research Topic Explore feature
• Takes natural language query and search
concepts in CAplus and Medline• Concepts are identified using the natural
adjectives and filler words• Concepts are checked for chemical names
– Searched both as name and as CAS RN
• Various combinations of terms as candidates– Exact phrase for a simple question– Terms closely associated in the text (same sentence)– Terms anywhere in the text (same document)
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How to add synonyms
• SciFinder includes many different word spellings, abbreviations and many synonyms– Not comprehensive ; please consult your
answers for terms not highlighted in blue
• Use brackets to indicate a synonym to a particular concept– E.g., drug analysis (pharmaceutical analysis)– Could use “OR” in simple cases
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More Research Topic features
• Can use a CAS Registry Number in a natural phrase
• Can use words to exclude a concept– Refine by research topic can even start with a
NOT operator• Use quotes to find words as entered• Use WITH when “anding” a list• May use AND when searching• There are limits to the complexity of your
search statement
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Topic Search of Liver fluke
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Refining by Thailand References
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Limit by Thailand
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Topic searching using WITH
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Getting Related Substances
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Substances found within papers
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Refine by Structure
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Refine by Structure
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Browse Table of Contents
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Browse Table of Contents
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Browse Table of Contents
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ChemPort