Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security...

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Bionanotechnology for Public Security and Environmental Safety West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015 PI: Paul L. Hill, Ph.D. Submied: 16 October 2009 Award Date: 13 August 2010 Official Start Date: 15 August 2010 Expiration Date: 31 July 2015 Award No: EPS-1003907

Transcript of Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security...

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Bionanotechnology for Public Security and Environmental Safety

West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

PI: Paul L. Hill, Ph.D.Submitted: 16 October 2009

Award Date: 13 August 2010Official Start Date: 15 August 2010

Expiration Date: 31 July 2015

Award No: EPS-1003907  

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Bionanotechnology for Public Security and Environmental Safety

Acronyms

BRF Bioengineering Research Facility

CI Cyberinfrastructure

CTC Community and Technical College

ELT Executive Leadership Team

ETAB External Technical Advisory Board

GFP Graduate Fellowship Program

HPC High Performance Computing

IRT Interdisciplinary Research Team

LA Learning Assistants program

MU Marshall University

PUI Predominantly Undergraduate Institution

RCF Research Challenge Fund

SCF Shared Computing Facility

TREK Teacher Research Experience for advancing Knowledge

UREP UnderREPresented Populations

WV West Virginia

WVSU West Virginia State University

WVU West Virginia University

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Table of Contents

Executive Summary one

Introduction one

Vision two

Mission two

Alignment with State S&T Priorities two

Strategic Priorities four

Research four

Diversity six

Workforce Developement seven

Cyberinfrastructure seven

External Engagement - Outreach, eight

Communication and Dissemination

Evaluation and Assessment nine

Sustainability ten

Management eleven

Anticipated Impacts of the RII eleven

Appendix A - Milestones twelve

Appendix B - Preliminary Metrics eighteen

Appendix C - Risk Mitigation Matrix tenty-one

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Bionanotechnology for Public Security and Environmental Safety

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

West Virginia Strategic Plan for RII Implementation

A. Executive Summary

Introduction

Prior investments by NSF and the State of West Virginia in researchers and instrumentation havebuilt a base competency in nanoscience through support of WVNano, the State of West Virginia's initiative for nanoscale science, engineering, education, and workforce and economic development.West Virginia University, Marshall University and West Virginia State University partnered with the WVEPSCoR office and external advisors to develop a program that would build upon prior investments and propel the West Virginia research enterprise forward in bionanotechnology.

In 2010, West Virginia was awarded a $20 million cooperative agreement with the National ScienceFoundation to develop national recognition for strong research and discovery in bionanotechnologyfor public security and environmental safety.

Strategy: The RII program is directed toward a number of complementary activities to enhance

the competitive position of WV S&T to the benefit of its citizens. Specific infrastructure investmentsinclude:

1. Investing in Interdisciplinary Research Teams (IRTs) through new hires and advanced equipment to design and fabricate the critical components for next-generation devices to exploit opportunities in molecular recognition and cell-based platforms. The IRTs will serve as a model for interdisciplinary efforts across multiple WV institutions and we are building a cyber-enabled network of scientists and engineers.

2. Seeding new research opportunities in cellular biology. This research investment is helping leverage established and ongoing state and federal investments in bionanotechnology, thereby providing tools to explore cells and their environment at the nanometer scale. It is also providing a robust opportunity for student training in state-of-the art research experiences.

3. Enhancing student and faculty diversity by implementing a system-wide diversity action plan, the core of which is a WVI3 (Innovation through Institutional Integration) Think Tank which is bringing together key scientists and educators to direct, integrate, and fill gaps in currently funded K-20 programs.

4. Providing workforce training and development opportunities to a diverse group of students and institutions through a new PUI/CTC Incubator, piloting a business-science M.S. program, and engaging the private-sector through internships and entrepreneurial coursework.

5. Enhancing CI by providing researchers with advanced tools to predict nanoscale behavior. Thisactivity is complementing the EPSCoR Track II (RII-T2) award, linking human resources in the state to leverage their intellectual capital.

6. Improving science teacher retention and competency through a pilot program, Teacher Research Experience for advancing Knowledge tied to research activities; recruiting teachers through a Learning Assistants program ; and providing underrepresented minority, disabled persons, first-generation college students and women the tools to be successful in future careers through a new graduate fellowship program.

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Collectively, these initiatives will strengthen the State’s human resource base and provide neededtools to create integrated devices that will advance ongoing biometric identification efforts for publicsecurity, detect environmental toxins, and explore how cells can be used as a platform for more advanced diagnostic devices with private sector engagement.

Previous RII and state investment positioned WV to focus on bionanotechnology as a platform for future R&D. WV’s investment in tools and human resources to build a bionanotechnology platformwill advance 1) next-generation public security research, supporting state leadership in molecularrecognition; 2) field deployable technology to promote environmental stewardship in support ofgreen growth of WV’s energy intensive economy; and 3) nanoscale cell-based devices that can beused to explore cellular responses to the environment. The WVNano Initiative, a State-wide organization enabled by the 2006 RII grant, coordinates the major scientific and educational activities and will be the catalyst for the Center’s creation. The current effort is serving as the foundation for a sustainable, externally funded Center of research excellence in bionanotechnologybenefiting from the State’s established and emerging research and education programs in biometrics,nanotechnology, forensic science, and molecular biology at WVU, MU, and WVSU. Best practices will arise from a careful assessment of the program, and through dissemination will help transform,not only WV, but also other regions of the U.S. to move competitively into the future.

VisionWithin five years, the West Virginia RII program will build a nationally recognized and sustainablestatewide center in Bionanotechnology for Public Security and Environmental Safety.

Mission The West Virginia RII program will build the necessary human and physical research infrastructureand the needed educational and training programs to create a statewide center in Bionanotechnologyfor Public Security and Environmental Safety to advance a biotechnology platform consisting of:

1) Next-generation public security research, supporting state leadership in molecular recognition;

2) Field deployable technology to promote environmental stewardship in support of sustainable growth of WV’s energy intensive economy; and

3) Nanoscale cell-based devices that can be used to explore cellular responses to the environment.

Alignment with State S&T PrioritiesIn FY2005, WVEPSCoR led academic and business leaders in the development of the state’s Science &Technology (S&T) strategic plan, Vision 2015. The plan names identification sciences and bionanotechnology as two key industries for development in WV. Under the bionanotechnologyumbrella, Vision 2015 directs attention to developing public security and environmental safety technologies. The West Virginia RII program addresses these priorities in Vision 2015 and will contribute to the economic development of the state.

The WV RII program provides the necessary infrastructure to stimulate innovative researchand integrated education, workforce development and diversity programs around a platform of bionanotechnology for enhanced public security and environmental safety. Success will enhancethe competitiveness of WV academic institutions and help transform the economy, creating new employment opportunities in the state.

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Overview of Strategic PlanThis RII supports a number of integrated activities to enhance the competitive position of WV Science and Technology. Specific infrastructure investments include: 1) investing in InterdisciplinaryResearch Teams (IRTs) through new hires and advanced equipment to design and fabricate criticalcomponents for next generation devices to exploit opportunities in molecular recognition andcell-based platforms; 2) seeding new research opportunities in cellular biology to leverage establishedand ongoing investments in bionanotechnology, thereby providing tools to explore cells and their environment at the nanometer scale; 3) enhancing student and faculty diversity by implementing a system-wide diversity action plan, the core of which is a WVI3 Think Tank charged with bringingtogether key scientists and educators to direct, integrate, and fill gaps in currently funded K-20 programs; 4) providing workforce training and development opportunities to a diverse group of students and institutions through a new PUI/CTC Incubator, piloting a business-science M.S. program and engaging the private-sector through internships and entrepreneurial coursework; 5) enhancing cyberinfrastructure (CI) by providing researchers with advanced tools to predictnanoscale behavior; 6) improving student retention and science teacher recruitment and competencythrough a pilot program, Teacher Research Experience for Advancing Knowledge (TREK) and aLearning Assistants (LA) program tied to research activities; and 7) providing underrepresented minority, disabled persons, first-generation college students and women the tools to be successful in future careers through a new graduate fellowship program. To enhance research activities andmove toward a Center, regional collaborations are being strengthened with universities and centersof excellence with complementary strengths and needs, such as NIOSH, Carnegie Mellon University,and the NSF-IUCRC, Center for Identification Technology Research, and its affiliates, e.g., DoD theFBI, and various industrial partners.

The WV RII project is congruent with the WV Science and Technology Strategic Plan, Vision 2015. Particularly, the outcomes of this investment in the West Virginia research enterprise will addressseveral of the goals of that plan including building a nationally competitive research cluster, developing intellectual property that will help build tech-based businesses, and increasing STEM student retention (emphasizing broadening participation) and increasing STEM doctorates awarded.

Process

RII participants (including the leadership team and faculty) and members of the WV Science and Research Council met on November 3 and 4, 2010 at the WVU Alumni Center in Morgantown, WV to develop a strategic implementation plan for the WVEPSCoR RII project. Dr. Kevin DiGrigorio facilitated the strategic planning process and NSF Program Officer Dr. Maija Kukla was also presentto observe and provide advice. After review and editing, and approval of the Science and ResearchCouncil, the WV RII Strategic Implementation Plan was provided via email to Dr. Kukla on February2, 2011.

The Strategic Plan which follows is organized in sections that follow the proposal which was submitted by WVEPSCoR: Research (IRT 1, IRT2, IRT2 and Human and Physical Infrastructure), Diversity, Workforce Development, Cyberinfrastructure, External Engagement, Evaluation and Assessment, Sustainability, and Management. For each section, one or two Strategic Priorities weredeveloped. For each Strategic Priority, groups of participants worked together to develop the plansthat would allow them to reach the objective. They also developed a set of provisional metrics (Appendix B) that would allow evaluation of success and milestones (Appendix A) to gauge progress.

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Strategic Priorities

Research:

IRT 1 - PORTABLE AND RAPID IDENTIFICATION PLATFORMS

IRT 1 targets approaches and component technologies that address key barriers to creating rapid,portable DNA analysis needed for biometric applications. To enable rapid and portable microfluidicsystems capable of identifying humans by DNA fingerprinting, IRT1 is developing critical compo-nents: rapid PCR with nanofluidic/microfluidic interface (NMI) concentrators and photonic crystals(PhC) for sensitive and integrated fluorescence detection.

Strategic Priority: Develop rapid and portable microfluidic systems capable of identifying humans and pathogens based on unique DNA signatures while training students and post-docs inthese research areas. Responsible party: IRT1 Leader, Jeremy Dawson

Plans• Integrate modular components for cell lysis, DNA extraction, separation and optical detection

technologies

• Validate bench-top, PCR-based detection and fingerprinting of human and pathogenic DNA

• Develop and optimize microfluidic interfaces

• Refine application-specific rapid, high-resolution electrophoretic DNA separation

• Integrate nanophotonic structures for optical detection of DNA markers into microfluidic architectures

• Collaborate with other regional centers as needed and appropriate

• Educate and train post-docs, PhDs and other students

IRT 2 - FIELD-DEPLOYABLE MICROFLUIDIC ELECTROCHEMICAL SENSORS FOR MULTIPLEXED DETECTION OF HEAVY METALS ANDSMALL MOLECULE TOXINS

The goal of IRT2 is to develop the fundamental scientific knowledge and engineering approaches required to fabricate a highly sensitive, selective, and portable field-deployable microfluidic electrochemical sensor for heavy metals (Hg, Pb and As) and pesticides/herbicides (malathion,atrazine, propanil). This sensor will eventually achieve detection and analysis time comparable or better than commercial large-scale analytical instruments. The IRT’s approach will leverage a sensor element and signal transduction device, developed by Wu and co-workers at WVU that are sensitive and analyte specific.

Strategic Priority: Develop lab-on-a-chip devices for detection of environmental toxins and extend to clinical diagnostic tools while training students and post-docs in these research areas. Responsible Party: IRT2 Leaders Nick Wu and Pete Gannett

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Plans

• Develop aptamer selection methods for environmental toxins

• Optimize molecular recognition probe (aptamer/protein/antibody, binding mechanism of detection)

• Develop and optimize nanoelectrode arrays (NEA) for lab-on-a-chip devices

• Fabricate and optimize microfluidic systems for blood-target separation and analyte capture

• Develop a modular system for on-chip fluids control

• Integrate and test devices

• Develop lab-on-a chip devices (for example, for high-throughput drug screening, cancer marker detection, heavy metal detection)

RESEARCH: IRT 3 - EX VIVO AND IN VITRO BIOMIMETICS FOR CELLULAR RESPONSE MONITORING

The goal of IRT 3 is to develop groundwork for a cell-based sensor platform that seeks to replicate

the complexity of cell behavior in a chip-based component. These cell-based sensors will advance

analytical investigations beyond composition to determine fundamental effects of materials in the

environment. To achieve these goals, microfluidic technology that supports in vitro (from cultured

cells) and ex vivo (from fresh biopsies) culture will be developed and combined with optical

microscopy and downstream integrated nanosensors for analysis of cells that naturally grow in

vivo as monolayers.

Strategic Priority: Develop microfluidic cell-based platforms to assess real time physiological

responses to external agents and stimuli while training students and post-docs in these research

areas. Responsible parties: Yon Rojanasakul at WVU, Elmer Price at MU

Plans

• Design and fabricate microfluidic chips for the growth and study of epithelial or endothelial monolayers

• Develop extracellular matrix (i.e. fibronectin), antibody-coated or surface- derivatized growth areas (MU and WVU)

• Grow cell lines and primary cultures on chips to optimize function and longevity

• Optimize functional assays (NO release for endothelial cells, transepithelial barrier properties, calcium transients or mucus release for epithelial cells)

• Determine the effects of nanoparticles and toxins on monolayer properties

• Integrate chips into instruments for optical and electrical detection and downstream sensors

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HUMAN AND PHYSICAL INFRASTRUCTURE

Strategic Priority: Increase research capability by strategic faculty hiring and investment in advanced instruments. Responsible Parties: John Maher (MU), Curt Peterson (WVU), Ulises Toledo(WVSU)

Plans

• Hire faculty with expertise in organismal development (MU)

• Hire faculty with expertise in molecular mechanisms underlying cellular differentiation (MU)

• Purchase and install advanced genome sequencer (MU)

• Hire faculty with expertise in computational biology (WVSU)

• Purchase and install a suite of shared equipment – HPLC, GC-Mass Spec, protein analyzer, light scanner, microprobe (WVSU)

• Purchase and install 576 cores to expand the Shared Computational Facility (SCF) (WVU)

• Purchase and install suite of shared equipment in BRF (WVU)

Diversity

WVEPSCoR’s diversity plan is initially designed to address student retention issues of

underrepresented populations in the STEM enterprise. As WV is an unusually ethnically

homogenous state (< 5% minority), its underrepresented populations (UREP) include minorities,

women, persons with disabilities, first-generation and/or economically disadvantaged students.

WVEPSCoR has established working relationships with state leaders and key diversity recruitment

and retention programs on partner campuses including CTCs. Through an ongoing team

approach, diversity strategies and initiatives will be conducted, supported and evaluated

throughout the project to ensure use of best practices and that benchmarks and milestones are met.

Strategic Priority: Increase undergraduate UREP student retention rates in STEM degrees

to achieve the same completion rates as majority students. Responsible parties: Brittan Hallar

(WVEPSCoR), Tina Cartwright (MU), Aniketa Shinde (WVU), Dedrielle Taylor (WVSU)

Plans

• Determine and categorize the baseline level of UREP STEM students

• Collect data on barriers, gaps, and best practices for UREP STEM student retention

• Periodically disseminate successful programs throughout the state with state-wide coordination through WVI3 Think Tank and Chancellor’s Diversity Initiative

• Leverage WVI3 and CDI Council to form campus networks and a Statewide network to foster communication and collaboration between campuses, communities, and industry throughout West Virginia

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

• Involve PUIs and CTCs in learning about best practices to increase UREP STEM student retention at their respective institutions

• Secure new external funding to implement academic support programs at our institutions that enhance student success and increase UREP STEM student retention

• Involve UREP undergraduate students in science research, targeting IRT projects while not excluding other research projects

• Periodically identify existing institutional support programs (HELP Center, others) and utilize them to enhance student retention as appropriate

• Create a statewide reporting system or assessment tool for UREP students in STEM

Workforce Development

Through this RII, WVEPSCoR is complementing the Governor’s investments in workforcedevelopment (WFD) by focusing on building a diverse workforce in STEM fields, specifically in bionanoscience and biotechnology. WV’s objective is to increase technically competent graduates from the state’s colleges, universities and community colleges.

Strategic Priority: Increase the annual number of STEM graduates from the state’s colleges, universities, and community colleges. Responsible parties: Paul Hill (WVEPSCoR), John Maher (MU, Curt Peterson (WVU) , Ulises Toledo (WVSU)Plans

• Create a “workforce development plan” for STEM fields focusing on nanobio science and biotechnology (HEPC)

• Implement Summer Teacher/Student Research Program (TREK) (MU, WVSU, WVU)

• Continue support of PROMISE and HEG Scholarships (HEPC)

• Create PUI/CTC Incubator Program (MU, WVSU, WVU)

• Design and implement MS/Business degree (MU, WVSU)

• Implement Summer Institutes for HPC (also under CI)

• Implement Graduate Fellowship Program (WVU)

• Implement Learning Assistant (LA) Program (MU, WVSU, WVU)

• Strengthen articulation agreements between CTCs and colleges and universities

Cyberinfrastructure

CI efforts will support both broad CI goals and specific objectives of Vision 2015 which encourages

deployment of sustainable resources and expansion of advanced network infrastructure, enhanced

HPC and data storage resources, acquisition of inter-institutional collaboration tools, and develop-

ment of advanced applications and tools for the research community. Expansion of the Shared

Computational Facility will allow increased computational and modeling integration into RII

research and will establish the path for future growth of CI-enabled research and discovery. It

will also serve as a magnet for future computational research group hires.

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Strategic Priority:: Increase discovery and innovation through computational research and

the collaboration of theoretical, experimental, and computational researchers. Responsible party:

James Lewis

Plans

• Integrate seamlessly with RII Track 2

• Build CI-enabled shared facilities

• Manage a moderately sized HPC cluster to enable computational research

• Sustain resources via increased research competitiveness

• Enable a sustainable CI workforce by offering HPC-related Summer Institutes, system-wide faculty mentoring, and campus-level HPC specific workshops

• Link instrumentation remotely using CI

• Create a virtual science collaboratory

External Engagement - Outreach, Communication and Dissemination

The overall goal of WVEPSCoR’s Outreach, Communication and Dissemination Plan is to effectivelycommunicate results, benefits and processes of science to WV’s citizens at all education levels. Theseefforts will help build scientific literacy in the state and strengthen education and research capacity.

Strategic Priority: Communicate and disseminate the importance, outcomes, and innovations

from the RII and other STEM activities to West Virginia stakeholders, policy makers, and citizens. Responsible party: Kelly Merritt (WVEPSCoR)

Plans

• Continue publication of the Neuron

• Bring in Nanooze-The Exhibition and create ancillary learning activities to extend the experience into the classroom

• Develop a regional edition of the Nanooze magazine

• Advertise in the statewide business magazine, WV Executive

• Continue the biennial statewide STaR Symposium

• Enhance DSR website with a “Discovery” tab highlighting findings of WV researchers

• Create a Press Room on the website to facilitate media access to information

• Contract with MetroNews Radio Networks or other venues for a year-long statewide radio campaign to increase awareness of the benefits of the research in this proposal and others

• Communicate regularly with NSF EPSCoR via telephone, email and/or personal meetings to coordinate NSF involvement in Outreach and Communication activities

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Evaluation and Assessment

Success in the RII program will be measured through a variety of mechanisms all nucleated around

a comprehensive evaluation and assessment plan utilizing qualitative and quantitative approaches to

provide both formative feedback and summative assessment. Process use (self-assessment, collective

knowledge generation and collaborative action) will encompass institutional perspectives and will

create a learning process for the management team that will help build capacity, sustainability and

institutionalization. The management team will be actively engaged in identifying the information

needed to make decisions, and in interpreting and using the evaluative data. The management team

will respond to external evaluation and External Technical Advisory Board (ETAB) and focus on

how recommendations will be incorporated into practice along with a timeframe for the appropriate

actions.

Evaluation findings will be used by the project’s management team to inform processes and

practices, decrease barriers to research competitiveness and develop strength for the formation

of intra/interjurisdiction collaborations to address scientific issues of regional relevance and

national importance.

Strategic Priority: Provide both formative feedback and summative assessment of overall

program implementation, milestones, benchmarks, and deliverables. Responsible party: Rose Shaw

Plans

• Refine and expand the comprehensive evaluation and assessment plan with input from

the grant leadership

• Integrate recommendations of the external evaluation and the External Technical Advisory

Board (ETAB) to inform processes and practices and decrease barriers

• Collect and provide metric data to NSF and stakeholders

• Develop uniform data collection protocols

• Utilize the existing metric collection and reporting system (GO!)

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Sustainability

Infrastructure improvements will be sustained through: 1) human infrastructure and equipment

secured by State [RCF ~$4M annually and RTF] and university funds; 2) continuing efforts to

increase the RCF; 3) increasing number and competitiveness of individual, group and large-scale,

multidisciplinary proposals from all faculty, research clusters and partners; 4) building stronger

research collaborations; 5) setting up university-wide undergraduate research education offices;

and 6) setting up a post-doc and junior faculty mentoring system that will increase success of all

faculty. Cyber-enabled mentoring and continued implementation of Vision 2015 will improve

policies, and financial and infrastructure support for workforce and research enterprise. The BRF

and Cyber Facilities will be sustained as part of the WVNano Shared Facilities. A senior faculty

member will be hired at WVU to be permanent WVNano director, will be sustained by the

university and lead the transition of the program to Center status.

Strategic Priority 1: Sustain and advance the state-wide infrastructure improvements in

bionanotechnology beyond the duration of the RII. Responsible parties: Paul Hill (WVEPSCoR),

John Maher (MU), Curt Peterson (WVU), Ulises Toledo (WVSU)

Plans

• Secure human and physical infrastructure, including equipment, by State (RCF ~$4M annually and RTF) and university funds

• Double the percentage of state video lottery funds dedicated to the RCF

• Increase the number and competitiveness of individual, group and large-scale, multidisciplinary proposals from all faculty, research clusters, and partners

• Promote stronger research collaborations among various institutions

• Set up university-wide undergraduate research education offices

• Set up a post-doc and junior faculty mentoring system that will increase success of all faculty

Strategic Priority 2: Develop additional competitive research areas through seed funding of new

ideas related to the focus of the RII and through developing an emerging area of interdisciplinary

research in cell biology and biotechnology. Responsible parties: Elmer Price (MU), David Lederman

(WVU), Tim Ruhnke (WVSU)

Plans

• Hold annual competition for seed funding

• Develop junior faculty through mentoring and grantsmanship training

• Purchase and install advanced instrumentation at Marshall and West Virginia State Universities

• Develop collaborative research between Marshall and West Virginia State faculty.

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West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Management

Strategic Priority: Provide leadership oversight and resources and ensure timely completion

of milestones and deliverables through a multi-level management approach. Responsible party:

Paul Hill (WVEPSCoR)

Plans

• Operate a multi-level management team with defined roles and responsibilities

• Conduct quarterly Science and Research Council Meetings to review major areas of project progress

• Conduct quarterly Executive Leadership Team meetings to review budget milestones and deliverables and provide feedback

• Conduct reverse site visit

• Solicit feedback from faculty and staff involved in project and use to evaluate and modify plans and activities

• Conduct annual ETAB program evaluation and use results to modify plans and activities

Plan Revision

This strategic plan will be modified as needed throughout the course of the project, including re-

vising activities, goals, and metrics based on experience and learnings to best fulfill the Vision

and Mission.

We will conduct an Annual Review of the entire Strategic Plan with the full team.

Each team will meet at least quarterly to review and revise plans and will disseminate results,

updates, and changes in Quarterly Reports.

Anticipated Impacts of the RII

This RII will not only advance technology important to national security, but also provide signif-

icant research and education experiences for a diverse group of students, post docs, high school

teachers and institutions in the state. Research discoveries, education and workforce develop-

ment programs will enhance the prosperity of the state and the nation by preparing our citizens

for the increasingly knowledge-based economy. Existing and developing partnerships with

small technology companies, large industry and government agencies such as DoD ensure that

discoveries will be applied beneficially to the problems of the state and nation.

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earc

h i

nit

iate

d

1. A

pta

mer

sel

ecti

on

met

ho

ds

dev

elo

ped

fo

r en

vir

on

men

tal

toxi

ns

2. N

ano

elec

tro

de

arra

ys

dev

elo

ped

an

d o

pti

miz

ed

3. M

icro

flu

idic

sy

stem

s fo

r b

loo

d-

targ

et s

epar

atio

n

and

an

aly

te c

aptu

refa

bri

cate

d a

nd

o

pti

miz

ed

1. S

ucc

essf

ul

inte

gra

tio

n o

f N

O p

rob

es i

nto

m

icro

flu

idic

ch

ips

for

NO

rel

ease

q

uan

tifi

cati

on

(M

U)

2. S

ucc

essf

ul

inte

gra

tio

no

f ch

ips

into

flu

ore

s-ce

nce

mic

rosc

op

e p

latf

orm

fo

r re

al t

ime

NO

det

ecti

on

in

flu

ore

s-ce

ntl

y-l

abel

ed l

ive

cell

s

Yea

r 4

1. S

ucc

essf

ul

com

po

nen

t in

teg

rati

on

in

to

fun

ctio

nal

su

bsy

stem

2. A

gre

emen

ts w

ith

par

tner

s/sp

on

sors

fo

rco

op

erat

ive

rese

arch

and

res

earc

h i

nit

iate

d

Yea

r 5

1. S

ucc

essf

ul

inte

gra

tio

no

f m

od

ule

s in

to

syst

em-l

evel

ar

chit

ectu

re

2. S

yst

em-l

evel

fu

nct

ion

alit

y a

chie

ved

3. T

ech

tra

nsf

er p

lan

d

evel

op

ed

1.M

od

ula

r sy

stem

of

on

-ch

ip fl

uid

s co

ntr

ol

dev

elo

ped

2. L

ab-o

n-c

hip

dev

ices

dev

elo

ped

an

d

succ

essf

ull

y t

este

d.

1. F

luid

ic c

on

dit

ion

s fo

rlo

ng

-ter

m c

ult

uri

ng

of

cell

s in

ch

ips

op

tim

ized

2. A

pp

roac

hes

fo

r h

igh

-th

rou

gh

pu

t T

EE

R

mea

sure

men

t o

pti

miz

ed(W

VU

)

3. E

ffec

ts o

f n

ano

par

ti-

cles

an

d t

oxi

ns

on

cel

lm

on

ola

yer

s q

uan

tifi

edas

fu

nct

ion

of

toxi

n

con

cen

trat

ion

.

Page 17: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

tth

irte

en

So

lici

tati

on

are

aY

ear

1Y

ear

2Y

ear

3Y

ear

4Y

ear

5R

esea

rch

Hu

man

an

d

Ph

ysi

cal

Infr

astr

uct

ure

Div

ersi

ty

1. G

eno

me

seq

uen

cer

inst

alle

d a

nd

o

per

atio

nal

(M

U)

2. C

ell

bio

log

y

inst

rum

enta

tio

n

inst

alle

d a

nd

o

per

atio

nal

(W

VS

U)

1.W

VI3

Th

ink

Tan

k

Ad

vis

ory

Bo

ard

cre

ated

and

act

ive

2. B

asel

ine

dat

a fo

r u

nd

erre

pre

sen

ted

(UR

EP

) S

TE

M

stu

den

ts c

oll

ecte

d

3. D

ata

on

exi

stin

g

cam

pu

s p

rog

ram

s fo

rU

RE

P S

TE

M s

tud

ents

coll

ecte

d.

1. O

rgan

ism

al

dev

elo

pm

ent

facu

lty

hir

ed (

MU

)

2. C

om

pu

tati

on

al

bio

log

y f

acu

lty

hir

ed(W

VS

U)

1.C

amp

us

net

wo

rks

of

UR

EP

ST

EM

pro

gra

ms

crea

ted

an

d c

oo

rdin

ated

2. S

tate

wid

e n

etw

ork

of

cam

pu

ses

and

in

du

stry

crea

ted

an

d a

ctiv

e

3. A

t le

ast

on

e ex

tern

alg

ran

t fu

nd

ed f

or

sup

po

rtin

g U

RE

P

ST

EM

ret

enti

on

4. R

epo

rt o

n U

RE

PS

TE

M s

tud

ents

an

d

pro

gra

ms

com

ple

ted

and

dis

trib

ute

d t

o

inst

itu

tio

ns.

3. C

on

dit

ion

s fo

r N

Oan

d T

EE

R m

easu

rem

ent

for

end

oth

elia

l an

d

epit

hel

ial

cel

ls

op

tim

ized

4. C

ellu

lar

fun

ctio

n

succ

essf

ull

y c

orr

elat

edw

ith

cel

l-sp

ecifi

c b

iom

ark

ers

1. M

ole

cula

r m

ech

anis

ms

facu

lty

hir

ed (

MU

)

2. S

har

ed b

ioen

gin

eer-

ing

res

earc

h f

acil

ity

com

ple

ted

(W

VU

) an

do

per

atio

nal

1. P

rog

ress

of

inst

itu

-ti

on

al c

han

ge

sup

po

rtin

gU

RE

P s

tud

ent

rete

nti

on

trac

ked

.

2. C

om

pre

hen

siv

e d

iver

sity

pla

n

imp

lem

ente

d

4. B

iop

hy

sica

l p

aram

eter

s o

f te

stag

ents

det

erm

ined

5. M

icro

chip

s

succ

essf

ull

y i

nte

gra

ted

wit

h o

pti

cal

and

do

wn

-st

ream

sen

sors

1.S

har

ed

com

pu

tati

on

al

faci

lity

up

gra

de

com

-p

lete

d a

nd

o

per

atio

nal

1. R

eten

tio

n d

ata

for

ST

EM

stu

den

tsth

rou

gh

gra

du

atio

n,

wo

rkfo

rce,

gra

d s

cho

ol

coll

ecte

d a

nd

an

aly

zed

.

2. S

yst

em-w

ide

rep

ort

ing

mec

han

ism

for

ST

EM

UR

EP

st

ud

ents

an

d

pro

gra

ms

dev

elo

ped

and

im

ple

men

ted

su

cces

sfu

lly

Page 18: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

fou

rtee

n

So

lici

tati

on

are

aY

ear

1Y

ear

2Y

ear

3Y

ear

4Y

ear

5R

esea

rch

Div

ersi

ty C

on

t.

Wo

rkfo

rce

Dev

elo

pm

ent

1. W

ork

forc

e D

evel

op

men

t C

om

mitt

ee

dev

elo

ped

an

d c

on

ven

ed

2. R

FP

fo

r P

UI

incu

bat

or

rele

ased

3. P

UI

Incu

bat

or

Gra

nt

awar

ded

4. M

S/b

usi

nes

s em

ph

asis

deg

ree

pro

gra

m d

esig

ned

5. C

amp

us

Ed

uca

tio

n

Co

ord

inat

ors

hir

ed

6. T

hre

e n

ew c

ou

rses

d

evel

op

ed a

nd

sc

hed

ule

d f

or

TR

EK

teac

her

s

7. T

each

ers

and

stu

den

ts

succ

essf

ull

y r

ecru

ited

for

TR

EK

8. R

esea

rch

pla

ns

dev

elo

ped

an

d

imp

lem

ente

d f

or

TR

EK

tea

cher

s

5. C

om

pre

hen

siv

e d

iver

sity

pla

n d

evel

op

ed

6. T

hin

k T

ank

re

com

men

dat

ion

s o

nsu

pp

ort

ing

an

d i

mp

rov

-in

g U

RE

P S

TE

M s

tud

ent

rete

nti

on

an

d p

rog

ram

sp

rov

ided

to

in

stit

uti

on

s

1. S

TE

M w

ork

forc

e d

evel

op

men

t p

lan

d

evel

op

ed

2. P

UI

Incu

bat

or

Gra

nts

awar

ded

3. M

S/b

usi

nes

s em

ph

asis

deg

ree

pro

gra

m

imp

lem

ente

d

4. T

each

ers

and

stu

den

tssu

cces

sfu

lly

rec

ruit

ed

for

TR

EK

5. T

RE

K im

ple

men

ted

6. L

A p

arti

cip

ants

an

dfa

cult

y s

ucc

essf

ull

y

recr

uit

ed a

nd

tra

ined

7. L

A p

rog

ram

Im

ple

men

ted

8. G

rad

uat

e F

ello

ws

recr

uit

ed a

nd

fel

low

ship

saw

ard

ed

1. P

UI

Incu

bat

or

Gra

nts

awar

ded

2. T

each

ers

and

stu

den

ts

succ

essf

ull

y r

ecru

ited

for

TR

EK

3. T

RE

K

imp

lem

ente

d

4. L

A p

arti

cip

ants

an

dfa

cult

y s

ucc

essf

ull

y

recr

uit

ed a

nd

tra

ined

5. L

A p

rog

ram

im

ple

men

ted

6. G

rad

uat

e F

ello

ws

recr

uit

ed a

nd

fel

low

-sh

ips

awar

ded

1. P

UI

Incu

bat

or

Gra

nt

awar

ded

2. T

each

ers

and

st

ud

ents

su

cces

sfu

lly

re

cru

ited

fo

r T

RE

K

3. L

A p

arti

cip

ants

an

dfa

cult

y s

ucc

essf

ull

y

recr

uit

ed a

nd

tra

ined

4. L

A p

rog

ram

im

ple

men

ted

5. G

rad

uat

e F

ello

ws

recr

uit

ed a

nd

fel

low

-sh

ips

awar

ded

1. T

each

ers

and

st

ud

ents

su

cces

sfu

lly

re

cru

ited

fo

r T

RE

K

2. T

RE

K i

mp

lem

ente

d

3. L

A p

arti

cip

ants

an

dfa

cult

y s

ucc

essf

ull

y

recr

uit

ed a

nd

tra

ined

4. L

A p

rog

ram

im

ple

men

ted

Page 19: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

fift

een

So

lici

tati

on

are

aY

ear

1Y

ear

2Y

ear

3Y

ear

4Y

ear

5R

esea

rch

Wo

rkfo

rce

Dev

elo

pm

ent

Co

nt.

Cy

ber

-in

fras

tru

ctu

re

9. A

pp

rov

al o

f ed

uca

tio

np

lan

s b

y c

amp

us

IRB

s

10. B

asel

ine

dat

a co

llec

ted

fo

r T

RE

K a

nd

LA

pro

gra

ms

11. P

edag

og

y c

ou

rse

dev

elo

ped

fo

r L

A

par

tici

pan

ts

12. L

A p

arti

cip

ants

an

dfa

cult

y s

ucc

essf

ull

y

recr

uit

ed a

nd

tra

ined

13. G

rad

uat

e F

ello

ws

recr

uit

ed a

nd

fel

low

-sh

ips

awar

ded

1. S

um

mer

In

stit

ute

fo

r H

PC

dev

elo

ped

2. F

irst

128

no

des

fo

rS

har

e C

om

pu

tin

g

Fac

ilit

y (

SC

F)

inst

alle

d

1. S

um

mer

In

stit

ute

fo

rH

PC

hel

d

2. N

ext

128

no

des

(fu

nd

ed b

y R

II T

rack

2)

inst

alle

d

3. C

amp

us

rese

arch

-sp

ecifi

c H

PC

wo

rksh

op

sh

eld

4. S

uit

able

in

stru

men

ta-

tio

n r

emo

tely

lin

ked

v

ia C

I

5. V

irtu

al S

cien

ce

Co

llab

ora

tory

cre

ated

and

in

use

1. S

um

mer

In

stit

ute

fo

r H

PC

hel

d

2. N

ext

64

no

des

in

stal

led

3. C

amp

us

rese

arch

-sp

ecifi

c H

PC

wo

rksh

op

sh

eld

1. S

um

mer

In

stit

ute

fo

r H

PC

hel

d

2. N

ext

128

no

des

in

stal

led

3. C

amp

us

rese

arch

-sp

ecifi

c H

PC

wo

rk-

sho

ps

hel

d

1. S

um

mer

In

stit

ute

fo

r H

PC

hel

d

2. F

inal

192

no

des

in

stal

led

3. C

amp

us

rese

arch

-sp

ecifi

c H

PC

wo

rk-

sho

ps

hel

d

Page 20: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

sixt

een

So

lici

tati

on

are

aY

ear

1Y

ear

2Y

ear

3Y

ear

4Y

ear

5R

esea

rch

Ext

ern

al

En

gag

emen

t

Ev

alu

atio

n a

nd

A

sses

smen

t

Su

stai

nab

ilit

y

1. T

he

Neu

ron

p

ub

lish

ed q

uar

terl

y

2. R

II A

ds

pu

bli

shed

in

WV

Exe

cuti

ve

mag

azin

e

3. S

TaR

Sy

mp

osi

um

hel

d

4. P

ress

Ro

om

cr

eate

d o

n D

SR

web

site

1. C

om

pre

hen

siv

e ev

alu

atio

n p

lan

refi

ned

and

exp

and

ed

2. R

eco

mm

end

atio

ns

pro

vid

ed t

o l

ead

ersh

ipan

d e

xter

nal

ad

vis

ors

3. U

nif

orm

dat

a co

llec

tio

n p

roto

cols

d

evel

op

ed

4. E

val

uat

ion

dat

a co

llec

ted

1. P

ost

-do

c m

ento

rin

gp

rog

ram

est

abli

shed

2. I

nte

r-u

niv

ersi

ty

coll

abo

rati

on

s es

tab

lish

ed

3. G

ran

tsm

ansh

ip

trai

nin

g i

mp

lem

ente

d

1. T

he

Neu

ron

p

ub

lish

ed q

uar

terl

y

2. D

isco

ver

y t

ab h

igh

-li

gh

tin

g W

V r

esea

rch

crea

ted

on

DS

R w

ebsi

te

3. S

tate

wid

e ra

dio

ca

mp

aig

n w

ith

RII

re

sear

ch s

po

ts

imp

lem

ente

d

1. R

eco

mm

end

atio

ns

pro

vid

ed t

o l

ead

ersh

ipan

d e

xter

nal

ad

vis

ors

2. E

val

uat

ion

dat

a co

llec

ted

1. S

tate

lo

tter

y f

un

ds

ded

icat

ed t

o t

he

Res

earc

h C

hal

len

ge

Fu

nd

do

ub

led

2. U

niv

ersi

ty-w

ide

un

der

gra

du

ate

rese

arch

offi

ces

esta

bli

shed

3. J

un

ior

facu

lty

m

ento

rin

g p

rog

ram

im

ple

men

ted

1. T

he

Neu

ron

p

ub

lish

ed q

uar

terl

y

2. N

ano

oze

-Th

e E

xhib

itio

n b

rou

gh

t in

to

to

ur

WV

sch

oo

ls

3. R

egio

nal

Nan

oo

zem

agaz

ine

crea

ted

an

dd

istr

ibu

ted

4. S

TaR

Sy

mp

osi

um

hel

d

1. R

eco

mm

end

atio

ns

pro

vid

ed t

o l

ead

ersh

ipan

d e

xter

nal

ad

vis

ors

2. E

val

uat

ion

dat

a co

llec

ted

1. I

nte

r-u

niv

ersi

ty

coll

abo

rati

ve

pro

po

sals

sub

mitt

ed

1. T

he

Neu

ron

p

ub

lish

ed q

uar

terl

y

2. R

egio

nal

Nan

oo

zem

agaz

ine

pu

bli

shed

an

d d

istr

ibu

ted

1. R

eco

mm

end

atio

ns

pro

vid

ed t

o l

ead

ersh

ipan

d e

xter

nal

ad

vis

ors

2. E

val

uat

ion

dat

a co

llec

ted

1. I

nte

r-u

niv

ersi

ty

coll

abo

rati

ve

pro

po

sals

sub

mitt

ed

2. I

nte

r-u

niv

ersi

ty

coll

abo

rati

ve

pro

po

sals

sub

mitt

ed

1. T

he

Neu

ron

pu

bli

shed

qu

arte

rly

2. R

egio

nal

Nan

oo

zem

agaz

ine

pu

bli

shed

an

d d

istr

ibu

ted

3. S

TaR

Sy

mp

osi

um

hel

d

1. R

eco

mm

end

atio

ns

pro

vid

ed t

o l

ead

ersh

ipan

d e

xter

nal

ad

vis

ors

2. E

val

uat

ion

dat

a co

llec

ted

1. I

nte

r-u

niv

ersi

ty

pro

po

sals

fu

nd

ed

2. I

nte

r-u

niv

ersi

ty

coll

abo

rati

ve

pro

po

sals

su

bm

itted

Page 21: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

sev

ente

en

So

lici

tati

on

are

aY

ear

1Y

ear

2Y

ear

3Y

ear

4Y

ear

5R

esea

rch

Man

agem

ent

1.Q

uar

terl

y S

cien

ce

and

Res

earc

h C

ou

nci

l m

eeti

ng

s h

eld

2. Q

uar

terl

y E

LT

m

eeti

ng

s h

eld

3. E

val

uat

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Page 22: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

Bionanotechnology for Public Security and Environmental Safety

Research

All iRTs and

Sustainability priority 2

Human and physical infrastructure

Diversity

Workforce Development

number of peer-reviewed research publications

number of citations in nationally recognized

peer reviewed research publications

number of invited talks

employment of program graduates in academic,

industrial, and government organizations

number and dollar value of extramural

research grants awarded

number of scientific outreach and education

grants awarded

number of undergraduate degrees awarded

number of phds awarded

number of post-docs trained

number of undergraduates matriculating to

graduate school

number of invention disclosures

number of patents

Successful faculty hiring when planned

Timely installation of equipment

Graduation rates for URep students in STeM

URep students participating in LA program

Completion rates of URep students receiving a

C or better in LA-supported courses

Grant submitted to support URep STeM

student retention

number of participating pUis and CTCs

participating in statewide URep STeM student

retention initiatives

number of URep undergraduate students in

iRT project research

A statewide reporting system or assessment tool

for URep students in STeM

number of new courses developed

(TReK, LA, GFp)

5

TBd, citations

will appear Yr 2

8

TBd, data

collected Sept. '11

$2.90M (18)

$1.17M (1)

21

13

2

TBd, data

collected Sept. '11

3

2

faculty hires

completed Yr 2&3

Fall 2009

enrollment: 847

Fall 2011 data

Fall 2011 data

1

TBd Year 2

1

0

0

10

doubled

15

+50%

$5.80M (36)

2.3M (2)

30

16

8

+25%

+50%

3

new hires

retained

equipmentinstalled in

Yrs 1-3

At thesame rateas theirmajoritycounter-

parts

50% of LAs

90%

2

TBd

5

developedand in use

4

WVEPSCoR RII Metrics (baseline is year one of the grant due to mismatch with faculty and projects in last grant)

Strategic Priority Area Provisional Metrics Baseline 5-Yr Target

eight-

teen

A p p e n d i x B

Page 23: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

nine-teen

West Virginia EPSCoR Strategic Plan for RII Implementation 2010-2015

Strategic Priority Area Provisional Metrics Baseline 5-Yr Target

Degree program developed (MS/Business)

Number of persons completing TREK

Number of persons completing LA Program

Number of persons completing MS/Business

degree

Number of Graduate Fellows completing PhD

Workforce Development Plan created

Number of PUIs receiving PUI Incubator awards

Number of proposals resulting from Incubator

grants

Number of awards resulting from Incubator

grants

Number of publications resulting from

Incubator grants

Number of graduate fellows mentored

Employment/collaboration of program graduates at academic, industry and government organizations (GFP, MS/Business)

Number of Internships established

(MS/Business)

Increase in the overall number of

computational community members

Increase in the number of interdisciplinary

computational/experimental grants

Increase in the number of interdisciplinary

computational/experimental publications

Amount of hardware resources obtained

beyond those provided by the RII

Increase in number of computational (only)

grants

Increase in number of computational (only)

publications

Number of students participating in Nanooze

exhibits

Number of classrooms and students using

ancillary learning activities

Number of WV Executive readers

Number of participants in STaR Symposium

Listenership of WV MetroNews Radio Network

Workforce DevelopmentCont..

Participation by UREP(TREK, LA, GFP,MS/Business)

Cyberinfrastructure

External Engagement

0

30

22

0

0

0

1

0

0

0

6

0

TBD, begins Yr 2

6

3

3

0

3

4

0

0

90,000

135

TBD, begins Yr 2

2

120

176

10/yr.

total 24 by yr 5

1

total 4, by yr 5

8 by yr 5

total 3 by yr 5

5 by year 5

total 30, byYr 5

75%

10

50

10

10

100%

15

20

500

20/500

100,000

200

100,000

Page 24: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

Bionanotechnology for Public Security and Environmental Safety

twenty

Strategic Priority Area Provisional Metrics Baseline 5-Yr Target

External Engagement

Cont.

Evaluation and

Assessment

Sustainability

Strategic Priority 1

Management

Number of unique and repeat visitors to DSR website, particularly to Discovery and Press Room

Number of print and other media pieces on RII

activities

External evaluator reports

On-site review summaries (ETAB reports)

Timely submission of program reports

Plans and activities modified in response to

evaluations

Number of WV Nano shared facilities users, including internal and external users and thosefrom academic, industrial, and government organizations

Number of external users of shared facilities

Number of academic users

Number of industrial users

Number of government users

Number of proposals that include user fees for

the shared facilities

Number of collaborative and interdisciplinary

proposals submitted

Number and dollar value of awards obtained

Percentage of video lottery funds dedicated to RCF

Dollars per year available from RCF

Creation of undergraduate research offices on all

three campuses

Number and type of IP actions and

commercialization

Budget expenditures on schedule and accurate

Deliverables reported on schedule

Reverse site visit successful

ETAB program evaluations provided in writing

and used by management and research teams

Unique IPs20,639 Total

Visitors 54,366total visitors tonew tabs 9,113

16

97

5

94 (2 external)

2

1

11

5

$4.1M (19)

0.50%

$3.1M

yes

2

quarterly

yes

+25%

24 in Yr 5

annually

annually

annually

annually

120

10

115

3

2all that makeuse of shared

facilities

10 annually

8.2M (38)

double

$6.2M

sustained

3 licenses/start-ups

annually

all successful

annually

Page 25: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

Co

mp

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Page 26: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-t

wo

Ref

ract

ive

ind

ex o

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ater

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Page 27: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-t

hre

e

Lac

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od

s

Har

d t

o d

isti

ng

uis

h b

etw

een

the

cell

po

pu

lati

on

un

der

go

ing

mo

rph

olo

gic

al c

han

ges

an

dce

lls

un

der

go

ing

ap

op

tosi

s.T

his

co

uld

lea

d t

o n

on

-val

idco

ncl

usi

on

s ab

ou

t n

ano

tub

eto

xic

ity

.

Hig

h

Lo

w

Lo

w

Mo

der

ate

Hig

h

Th

e re

sear

ch o

f th

e se

ed b

y D

inu

an

d

Ro

jan

asak

ul

pro

po

ses

an a

lter

nat

e w

ay

of

dev

elo

pin

g t

his

sen

sor,

an

d c

ou

ld b

e in

corp

ora

ted

in

to I

RT

3 t

o p

rov

ide

an

alte

rnat

e p

ath

to

th

e fi

nal

go

al.

Wil

l co

nsu

lt w

ith

NIO

SH

ab

ou

t th

e id

eal

con

fig

ura

tio

n f

or

the

spec

ific

typ

es o

f te

sts

they

bel

iev

e ar

e m

ost

im

po

rtan

t. T

his

wil

lh

elp

fo

cus

the

effo

rt a

nd

mak

e th

e fi

nal

d

evic

e m

ore

mar

ket

able

an

d u

sefu

l to

re

sear

cher

s an

d c

on

sum

ers.

Pro

vid

e ad

equ

ate

pH

co

ntr

ol

wit

h b

uff

ers,

rath

er t

han

CO

2 g

as; p

rov

ide

slo

w c

ircu

la-

tio

n o

f m

edia

, rat

her

th

an s

tati

c in

cub

atio

n

If c

ells

do

no

t re

spo

nd

dir

ectl

y t

o c

om

-p

ou

nd

, dev

elo

p a

lin

ked

sig

nal

tra

nsd

uc-

tio

n b

ased

on

en

gin

eere

d d

etec

tors

(su

chas

ap

tam

ers)

Dev

elo

p a

mea

ns

to a

mp

lify

th

e si

gn

al,

such

as

ho

rser

adis

h p

ero

xid

ase

con

jug

ated

anti

bo

dy

-bas

ed l

um

ines

cen

ce

Ad

dit

ion

al t

ox

icit

y e

xp

erim

ents

wil

l b

ep

erfo

rmed

. S

pec

ifica

lly

, cel

ls w

ill

be

incu

bat

ed w

ith

sin

gle

wal

led

car

bo

n n

ano

tub

es f

or

0, 1

2,24

, 48,

an

d 7

2 h

, su

bse

qu

entl

y s

tain

edu

sin

g l

ife

and

dea

th c

ell

assa

ys

and

o

bse

rved

via

flu

ore

scen

ce m

icro

sco

py

.

Med

ium

Hig

h

Hig

h

Mo

der

ate

Hig

h

IRT

3:

Cel

lula

r S

enso

rs(W

VU

) C

on

t.

IRT

3 (M

U)

See

d:

Din

u/

Ro

jan

asak

ul

Component

Condition

Consequence

Impact

Likelihood

Mitigation

Page 28: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-f

ou

r

It c

an b

e d

ifficu

lt t

o

det

erm

ine

the

mec

han

ism

s o

f n

ano

tub

e ce

llu

lar

up

tak

e in

rea

l-ti

me.

Lim

itat

ion

s in

ap

tam

erse

lect

ion

mak

e th

e se

n-

sor

app

lica

ble

to

a s

mal

ln

um

ber

of

ster

oid

alco

mp

ou

nd

s

Pro

po

sals

are

no

t co

mp

etit

ive

Man

usc

rip

ts n

ot

pu

bli

shed

Co

llab

ora

tiv

e to

ols

n

ot

resp

on

siv

e to

co

mm

un

ity

nee

ds

Co

llab

ora

tiv

e to

ols

are

pro

pri

etar

y o

r n

ot

exte

nsi

ble

Fea

ture

cre

ep i

n

coll

abo

rati

ve

or

vis

ual

izat

ion

to

ol

sco

pe

If w

e ca

nn

ot

dis

tin

gu

ish

b

etw

een

cel

lula

r u

pta

ke

by

pie

rcin

g v

s. b

y e

nd

ocy

tosi

s,

it w

ill

be

diffi

cult

to

dev

elo

pst

rate

gie

s to

mit

igat

e th

e ca

rbo

n n

ano

tub

e to

xici

tyan

d/o

r fu

rth

er p

urs

ue

the

mec

han

ism

s fo

r sp

ecifi

c to

xici

ty.

Wil

l li

mit

th

e ap

pli

cab

ilit

y o

fth

e se

nso

r.

Pro

po

sals

are

no

t fu

nd

ed

Gra

nts

wil

l n

ot

be

com

pet

itiv

e

Co

llab

ora

tiv

e fr

amew

ork

is

un

der

uti

lize

d

Co

llab

ora

tiv

e fr

amew

ork

is

un

der

uti

lize

d

Co

mm

un

ity

req

ues

ts f

or

fun

ctio

n e

xcee

d f

un

din

g

Hig

h

Med

ium

Mo

der

ate

Lo

w

Med

ium

Med

ium

Lo

w

Ad

dit

ion

al e

xper

imen

ts w

ill

be

per

form

edu

sin

g a

tom

ic f

orc

e m

icro

sco

py

to

det

er-

min

e ch

ang

es i

n t

he

cell

mo

rph

olo

gy

up

on

exp

osu

re. C

ell

mo

rph

olo

gy

up

on

nan

otu

be

exp

osu

re w

ill

be

com

par

ed w

ith

cell

mo

rph

olo

gy

of

con

tro

l sa

mp

les.

Hig

hm

orp

ho

log

ical

ch

ang

es o

r “h

ole

s” i

nto

cel

lm

emb

ran

e w

ou

ld c

on

firm

cel

lula

r en

do

cyto

sis.

In r

elat

ed w

ork

, th

e P

Is h

ave

fou

nd

th

atth

e se

lect

ion

can

be

eng

inee

red

to

det

ect

exp

losi

ves

in

en

vir

on

men

tal

sam

ple

s, g

iv-

ing

th

e p

roje

ct a

n a

lter

nat

ive

via

ble

tar

get

that

is

also

of

gre

at c

on

cern

fo

r se

curi

tyan

d e

nv

iro

nm

enta

l ap

pli

cati

on

s.

Imp

lem

ent

in-h

ou

se a

nd

ext

ram

ura

l p

re-s

ub

mis

sio

n r

evie

w

Pro

vid

e m

ento

rsh

ip a

nd

tea

chin

g r

elea

sefo

r R

II s

up

po

rted

fac

ult

y

Insu

re t

hat

to

ol

pro

toty

pes

are

d

emo

nst

rate

d e

arly

an

d i

tera

tiv

ely

im

pro

ved

Bu

ild

on

pro

ven

exp

erti

se, e

.g.,

the

Wo

rk-

too

ls e

xper

ien

ce a

nd

th

e C

HE

F t

eam

Co

mm

un

icat

e fe

atu

re s

et d

escr

ipti

on

an

dd

emo

nst

rate

wo

rkin

g p

roto

typ

es; d

ocu

-m

ent

des

ired

fea

ture

s n

ot

incl

ud

ed a

nd

com

mu

nic

ate

them

to

th

e C

on

sort

ium

.

See

d:

Din

u/

Ro

jan

asak

ul

Co

nt.

See

d:

Ho

llan

d/

So

ote

r

Em

erg

ing

them

e

Co

llab

ora

tio

nan

d

Vis

ual

izat

ion

Co

mp

on

ent

Co

nd

itio

nC

on

seq

uen

ceIm

pac

tL

ikel

iho

od

Mit

igat

ion

Hig

h

Med

ium

Hig

h

Hig

h

Hig

h

Mo

der

ate

Page 29: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-fi

ve

Co

mp

on

ent

Co

nd

itio

nC

on

seq

uen

ceIm

pac

tL

ikel

iho

od

Mit

igat

ion

Fac

ult

y

Hir

ing

: B

ioin

form

atic

sP

rofe

sso

r(W

VS

U)

Tw

o f

acu

lty

(MU

) C

ellu

-la

r/M

ole

cula

rM

ech

anis

ms

Sh

ared

F

acil

itie

s

Nex

t G

ener

atio

nS

equ

ence

r(M

U)

Cy

ber

-in

fras

tru

ctu

re

Hir

ing

of

this

fac

ult

ym

emb

er d

oes

no

t o

ccu

ru

nti

l 12

-24

mo

nth

s la

ter

fro

m o

rig

inal

pro

po

sed

dat

e

Del

ays

in h

irin

g

Lac

k o

f ab

ilit

y t

o r

eco

ver

cost

s v

ia u

ser

fees

an

dco

st s

har

e

Insu

ffici

ent

fun

ds

to d

e-v

elo

p n

ew u

sers

an

dp

roje

cts

Lac

k o

f u

sers

Cu

rric

ulu

m i

n b

ioin

form

atic

sis

no

t av

aila

ble

to

stu

den

ts /

Res

earc

h a

nd

ass

oci

ated

ac

tiv

itie

s ar

e n

ot

con

du

cted

as

pro

po

sed

.

Co

llab

ora

tio

ns

and

res

earc

hp

rod

uct

ivit

y m

etri

cs a

re n

ot

met

Ab

ilit

y t

o r

etai

n s

taff

an

d

serv

ice

con

trac

ts o

n

inst

rum

ents

is

jeo

par

diz

ed;

sust

ain

abil

ity

is

no

t ac

hie

ved

Inv

estm

ent

in “

fiel

d b

iolo

gy

gen

om

ics”

wil

l n

ot

bea

r fr

uit

Inv

estm

ent

no

t fu

lly

u

tili

zed

an

d c

om

pu

tati

on

sn

ano

mat

eria

ls c

om

mu

nit

yd

oes

no

t d

evel

op

Mo

der

ate

Med

ium

Med

ium

Med

ium

Med

ium

Med

ium

Med

ium

Hig

h

Mo

der

ate

Med

ium

Wh

ile

this

per

man

ent

facu

lty

po

siti

on

is

fill

ed, t

he

nee

d c

an b

e te

mp

ora

rily

met

by

hir

ing

a p

ost

-do

cto

ral

emp

loy

ee t

o p

rov

ide

sup

po

rt t

o t

he

pro

po

sed

act

ivit

ies

in

rela

tio

n t

o t

his

po

siti

on

.

Ad

d t

arg

eted

rec

ruit

men

t to

wid

ely

-ad

ver

tise

d a

pp

roac

h

Inst

itu

ted

new

sy

stem

fo

r ch

arg

ing

th

atta

kes

dir

ect

cost

s in

to a

cco

un

t fo

r ea

ch

inst

rum

ent,

in

clu

din

g s

taff

tim

e, s

erv

ice

con

trac

ts, c

on

sum

able

s, a

nd

tra

inin

g.

Wil

lre

vis

e ra

tes

in O

cto

ber

201

1 an

d p

roje

ct f

or

rest

of

fisc

al y

ear

to e

nsu

re s

ust

ain

abil

ity

.

See

k i

ntr

amu

ral

and

ext

ram

ura

l fu

nd

ing

Ad

dit

ion

al w

ork

sho

ps

wil

l b

e sc

hed

ule

d

to e

xpo

se f

acu

lty

to

th

e en

han

ced

CI,

an

dto

dem

on

stra

te t

hat

co

mp

uta

tio

nal

stu

die

sca

n b

e v

alu

able

to

th

eir

rese

arch

pro

gra

ms.

Co

mp

uta

tio

nal

fac

ult

y h

ires

in

ph

ysi

cs,

chem

istr

y a

nd

en

gin

eeri

ng

in

201

2 w

ill

hel

p i

ncr

ease

fac

ilit

y u

sag

e. S

eed

fu

nd

ing

may

be

use

d t

o e

nco

ura

ge

coll

abo

rati

on

b

etw

een

exp

erim

enta

list

s an

d

com

pu

tati

on

al s

cien

tist

s.

Page 30: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-s

ix

Co

mp

on

ent

Co

nd

itio

nC

on

seq

uen

ceIm

pac

tL

ikel

iho

od

Mit

igat

ion

Lea

rnin

g

Ass

ista

nts

(LA

)

TR

EK

Tea

cher

an

dS

tud

ent

Su

mm

er

Res

earc

hp

rog

ram

An

in

suffi

cien

t n

um

ber

of

lear

nin

g a

ssis

tan

ts a

rere

cru

ited

.

LA

s se

lect

ed d

o n

ot

per

-fo

rm t

o t

he

sati

sfac

tio

no

f fa

cult

y o

ver

seei

ng

cou

rses

.

Lac

k o

f in

tere

sted

an

dco

mm

itted

tea

cher

s to

par

tici

pat

e

Lac

k o

f ab

ilit

y t

o r

ecru

itst

ud

ents

to

par

tici

pat

e

Lac

k o

f R

II R

esea

rch

ers

wil

lin

g t

o a

ccep

t T

RE

Kp

arti

cip

ants

Th

e p

rog

ram

can

no

t o

per

ate

at f

ull

str

eng

th a

nd

th

us

its

imp

act

is m

ute

d, a

s n

ot

asm

any

stu

den

ts a

re r

each

ed.

Dep

artm

ents

can

cel

or

de-

crea

se p

arti

cip

atio

n i

n t

he

LA

pro

gra

m a

nd

/or

the

pro

gra

mfa

ces

facu

lty

op

po

siti

on

.

Red

uce

d i

mp

act

of

pro

gra

m

Tea

cher

par

tici

pan

t w

ith

ou

tst

ud

ent

cou

ld r

edu

ce

clas

sro

om

su

pp

ort

Lac

k o

f la

bs

to p

lace

teac

her

/stu

den

t p

airs

fo

rT

RE

K r

edu

ces

the

nu

mb

er o

f

Med

ium

Hig

h

Lo

w

Lo

w

Lo

w/

mo

der

ate

Med

ium

Med

ium

Mo

der

ate

Mo

der

ate

Mo

der

ate

Th

e E

du

cati

on

/Ou

trea

ch c

oo

rdin

ato

rs w

ill

incr

ease

eff

ort

s to

wo

rk c

lose

ly w

ith

th

ep

arti

cip

atin

g d

epar

tmen

ts a

nd

fac

ult

yle

ader

to

en

sure

th

e se

lect

ion

of

suffi

cien

tq

ual

ity

an

d q

uan

tity

of

stu

den

ts t

o s

taff

th

ep

rog

ram

. R

ecru

itm

ent

stra

teg

ies

such

as

Soci

ety

of

Ph

ysi

cs S

tud

ents

mee

tin

gs,

A

sso

ciat

ion

of

Wo

men

in

Sci

ence

mee

tin

gs,

and

oth

er m

eeti

ng

s o

f h

igh

ly m

oti

vat

ed

un

der

gra

du

ates

wil

l b

e u

sed

.

LA

Fac

ult

y l

ead

ers

and

Ed

uca

tio

n/

Ou

trea

ch c

oo

rdin

ato

rs w

ill

imp

rov

e th

ep

rep

arat

ion

co

nd

itio

ns

of

the

LA

s to

en

sure

that

th

ey a

re a

deq

uat

ely

pre

par

ed t

o

exec

ute

th

eir

du

ties

.

Op

en p

osi

tio

ns

wil

l b

e fi

lled

th

e fo

llo

win

gsu

mm

er w

ith

a m

ax. O

f 1

add

itio

nal

teac

her

/stu

den

t p

air/

yea

r. A

dd

itio

nal

re

cru

itm

ent

thro

ug

h h

igh

sch

oo

l v

isit

s an

d c

ross

pro

ject

pla

nn

ing

/ co

ord

inat

ion

for

pla

cem

ent

of

rese

arch

ers

fro

m m

ult

iple

pro

gra

ms

wil

l im

pro

ve

the

pro

cess

.

Mo

ney

fro

m m

issi

ng

stu

den

ts w

ill

be

uti

lize

d f

or

add

itio

nal

su

pp

ort

mec

han

ism

in t

he

clas

sro

om

. A

dd

itio

nal

rec

ruit

men

tm

ech

anis

ms

wil

l fo

cus

recr

uit

men

t o

nte

ach

ers

clo

ser

to p

arti

cip

atin

g c

amp

use

s

Res

earc

her

s o

uts

ide

of

the

RII

hav

e b

een

uti

lize

d t

his

firs

t su

mm

er a

t W

VU

. F

utu

reco

ord

inat

ion

eff

ort

s b

etw

een

th

is a

nd

oth

er

Page 31: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

twen

ty-s

evenC

om

po

nen

tC

on

dit

ion

Co

nse

qu

ence

Imp

act

Lik

elih

oo

dM

itig

atio

n

un

der

gra

du

ate/

gra

du

ate/

ou

trea

ch r

esea

rch

pro

gra

ms

wil

l p

re-a

ccep

t p

arti

cip

ants

in

tola

bs

in a

n a

ttem

pt

to d

istr

ibu

te t

he

par

tici

-p

atin

g a

cro

ss a

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ile

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ly

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men

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d o

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in

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al

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ate

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itie

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ith

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pp

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Page 32: Bionanotechnology for Public Security and Environmental ......Bionanotechnology for Public Security and Environmental Safety four Strategic Priorities Research: IRT 1 - PORTABLE AND

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the

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ve

and

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Th

ink

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k e

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as

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th

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exp

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atio

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s in

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stu

den

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ross

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ns.

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l ap

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exte

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fu

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to

su

pp

ort

ST

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re

ten

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ith

th

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ivis

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Po

licy

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nin

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in y

ou

ng

cen

tral

offi

ce s

taff

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d t

enu

red

fa

cult

y a

t u

niv

ersi

ties

in

lea

der

ship

. S

ucc

essi

on

pla

n i

n p

lace

.