Bioluminescence
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Transcript of Bioluminescence
Bioluminescence in
Environmental monitoring
Presented to :Ms Asifa Kiyani
Presented by: Nayyab Nadeem & Sara Hassan
AbstractBioluminescence is the production of light by living organisms such as bacteria,
fungi and animals .The following review deals with detection and monitoring of
pollutants using a biological method of rapid, cost effective and a sensitive
technique for toxicology testing is the latest idea. The past decade has developed
these novel tools which hold a far superior application compared to
conventional methods. Previously most such assays were plant, animal or algae
derived and as accurate as they were, they were expensive and required a large
sample size in order to be standardized. One of the firsts assays based on
bioluminescence was on the species V.fisheri and this has been reported to be
versatile and test protocol is simple.Bioluminescene based assays / techniques
are much sensitive when compared to wide range of chemicals or other bacterial
based assays such as enzyme inhibition, respirometry etc.The assays have the
added benefit of detecting toxicity across a wider range of toxic compounds.
Introduction• Bioluminescence in its simplest definition is the light emission by a living
organism.
• Their inherent beauty and eco friendliness has them marked for use in future
environmental monitoring ventures.
• However they can be time consuming and often rather daunting (3).Due to
these limitations the purpose is to find economic , quick and sturdy methods
of environmental monitoring and ecosystem maintainace.
• The toxicity assays utilizing these microorganisms are based on the working
principle that either light emission reduces or is inhibited in the presence of
pollutants they interfere with the metabolism of these microorganisms.
What is Bioluminescence
Naturally occurring bioluminescent
microorganisms in monitoring of
environment• The biolumiscenece emitting bacteria are found in freshwater,
deep seas and marine habitats. They belong to gram negative
cell wall group and are broadly divided into four types; vibrio,
shewanella, photobacterium and photorhabdus.
• The light emission results from metabolic reactions and the
process itself driven by co factors so when a particular toxic
substance interferes the light emission is compromised giving
an indication that a certain pollutant is present and extent to
which it is affected confirms the concentration of the pollutant.
• The bacterium photobacterium emits light
which lies in the blue green region of the
visible spectrum
• This method is sensitive, non invasive and
provides real time monitoring of pollutants.
V.fisheri
• The first isolated microorganism whose bioluminesing ability was
harnessed was vibrio fisheri
• The assay which was developed using a strain of V.fisheri was
later given the name Microtox . The system contains freeze-dried
bacteria which are activated prior to use and light emission is
measured by a luminometer.
• Hernando et al worked on v.fisheri strain and in 10 labs to
observe its light inhibition capabilities and assays based on
that. Their results were positive and confirmed that reliability
and the reproducibility of the assay designed based on light
inhibition of the V.fisheri.
• Scheerer et al carried out an experiment I n which they
provided optimum conditions for V.fisheri and cultures in
fermentors providing a long term continuous cultures for
reproducible detection of pollutants and their measurement
• The enzyme luciferase has two subunits which are alpha and beta
and coded by luxA and luxB
• This operons also consists of other gene such as luxC, lux D, luxE
and luxG along with luxA and luxB
• The greatest light emission occurs when cells are present in large
concentrations and not in dilute conditions
• Different mechanisms exist for the regulation of the expression of
the lux operons. The protein of luxR acts as a repressor.LuxI on the
other hand codes for autoinducer which leaves the cells and also
affects other surrounding cells. The repressor interacts with
autoinducer and results in decrease in light emission.
Bioluminescent organism used
in heavy metal monitoring and
detection• Heavy metal poisoning and its bioaccumulation is becoming an
arising concern.
• bioluminescent organisms may be used for the rapid remediation of
all such heavy metals polluted areas. These organisms usually have
promoters which are also called as sensing elements which allow
them to survive in such adverse environments.
• The luciferase genes are used as reported genes. The presence of
the analyte triggers a reaction which then results in light emission
• Angela et al constructed recombinant whole cell biosensors for the
detection and assessment of heavy metals. Both gram positive and
gram negative bacteria were used and were made to express the
bioluminescence producing genes luxCDABE in response to heavy
metals. Their results were supportive of the use of these microbial
recombinant whole cells.
• Sulivan et al worked with a primary statistical model based on the
crossings between the different detection ranges of five different
bioluminescent strains for identification of four heavy metals
cadmium, mercury, copper and arsenic. Their results showed that
the statistical model could be used with confidence and that no
sample pre treatment was required either.
• The use of these biosensors which use bioluminescent
microorganism as their biological agent have been used in
rainwater, freshwater and estuarine areas containing high
levels of mercury and they responded favorably.
• Another breakthrough which came was the online monitoring
of heavy metals in waste water effluents Waste water treated
effluents were found to contain heavy metals like lead ,
mercury etc and assays based on bioluminesing bacteria
coupled to devices have been developed which allow online
monitoring from remote far off areas of pollution.
Environmental monitoring by recombinant bioluminescent microorganisms
• One of the downside of the assays designed from V.fisheri is the
need for appropriate salt concentration due to their marine habitats
• They also function within a narrow pH and temperature range and
may not be suitable for terrestrial systems.
• E.coli is an example of transgenic bioluminescent microorganism
which has been used in evaluating pollutants in air, land and water
due to the vast genetic knowledge regarding these and they are
easy to use.
• One such example is a strain of E.coli called E.coli HB101 which
consists of the plasmid Pucd607 which consists of luxCDABE from
V.fisheri and the tet (tetracycline) promoter
• The other bacterial strains which have been transformed using this
Puc plasmid include pseudomonas fluroscens 10586 , P.putida F1
which is a bacterium able to breakdown toluene.
• The P.fluroscens is especially sensitive towards copper as well as
cadmium and has been used in monitoring of industrial effluents
such as malt whiskey distilleries.
• MacGrath et al reported that soils which had a low pH had high
levels of zinc and showed greater sensitivity towards the
p.fluroscens transgenic organism compared to E.coli HB101.
Why do we need Biomonitoring?
Water quality may be affected by:
Spills of oil and industrial products from tanks, pipelines
Pesticides from agricultural area, leaching pathogens
Endocrine disrupting chemicals
Neurotoxins, hepatotoxins from algae blooms
Contamination from terrorist attack (toxins, microbes,
viruses, radioactive compounds)
Accidents, sabotage etc.
MICROTOX ASSAY
Microtox assay uses marine bioluminescent bacterium strain Vibrio
fischeri (24)
V. Fischeri is exposed to a range of concentrations of toxic agents
like heavy metals Zn, Cd, Ni, Hg, Cu etc .
As the concentration of toxins in the sample increases the
consequential reduction in the light intensity emitted from the
bacterium is measured and compared to standard.
This shift in the light intensity output measured by a luminometer.
The concentration of the toxic substances fabricate a dose / light
response relationship.
Normal bioluminescence
Contaminated sample is added!!
Bioluminescence inhibition
Photobacterium Vibrio fischeri (Microtox test)
Photobacterium Vibrio fischeri
Bioluminescence
measurement at exposure
time 5, 15 and 30 minMicrotox M500 analyzer
Lights off lights on assay
Toxicity tests have been used for:
Marine and fresh waters biomonitoring
Toxicity testing of wastewaters and soils
Toxicity testing of fly ash leachates
Toxicity assessments of pure compounds, heavy metals and
pesticides
Wastewater treatment plant applications
Applications of ecotoxicity testing
Dinoflagellates and Bioluminescence
Dinoflagellates for environmental risk detection
• Bioluminescent dinoflagellates are also used in assays for ecotoxicological testing.
• The dinoflagellates Bioluminescence is dependant on circadian rhythms.
• In various studies Lingulodinium polyedrum, Pyrocystis noctiluca, Pyrocystis fusiformis, Ceratocorys horrida, Pyrophacus steinii and Pyrocystislunula have been employed to find the effects of xenobiotic contaminants on intensity of bioluminescence.
Use of dinoflagellates as a metal toxicity assessment tool in aquatic system
• Dinoflagellates selected Gonvaulax polvedra andPyrocystis lunula for the assessment of biologicaltoxicity of the selected contaminants present in theaquatic water samples. This study used thebioluminescence of dinoflagellates with QwikLiteassay developed by the US Navy for the heavy metalsHg, Cu, Cd, As, Pb, Cr, etc. The results obtained in theform of single metal toxicity in the order Hg+ > Cu > Cd> As > Pb > Cr Comparison was made to standardsolutions. Dinoflagellates demonstrated greatsensitivity to metal concentrations hence showinggreat prospect for testing heavy metal toxicity inaquatic systems (28).
ROLE OF BIOLUMINESENCE IN MARINE WATER AND WASTER
WATER TREATMENTS.
Assessment of heavy metals by bacterial bioluminescence in bench-scale wastewater treatment system
• According to one study the bioluminescent strain Shk1was used to determine the toxicity during the activatedsludge wastewater treatment in batch experiments usingbench-scale activated sludge system to determinepresence of heavy metals Ni, Cd, Cu and Zn using bothsources influent wastewater and activated sludge fromthe municipal wastewater treatment plant in batchexperiments.
• According to the findings of this study the Shk1 strainbioluminescence demonstrated the highest sensitivity toCd and Zn, then towards Cu, and least sensitivity to Ni.
USING OSTEOCOCCUS TAURI TO DETECT ANTIFOULING BIOCIDES IN MARINE WATER
• A recombinant was constructed using Ostreococcus tauri,known to be the smallest eukaryotic cell luminescentbiosensor with the aim to detect antifouling biocides.
• Diuron and Irgarol (antifouling biocides) and theirdegradation products prevalent in coastal waters wereselected to investigate the novel biosensor forecotoxicological testing.
• Cyclin-dependent kinase ( a cell cycle protein) fused toluciferase (CDKA-Luc) proved to be a highly sensitivebiosensors showing precise determination of diuron andIrgarol.
• Luminometer was employed to measure luminescencecompared to inhibition of growth. Luminescence is a moresensitive indicator of toxicity than growth inhibition in marinephytoplankton.
Detection of drugs in surface water and wastewater samples preliminary testing of
toxicity studies using vibrio fischeri
• Effluent from various industries including municipal waste waterfind their final resting place in the large water bodies like seas andoceans.
• To detect these pharmaceutical compounds in the water sample apreliminary test is performed using the bioluminescent strain VibrioFischeri for executing Microtox®.
• detect the presence of analgesic drugs, primarily acidic and polar innature. The drugs investigated according to a particular study wereibuprofen, gemfibrozil, diclofenac, naproxen, with theirdecomposition products like salicylic acid.
• This preliminary step was followed by combined analytical methodusing (LC–ESI-MS) toxicity and liquid chromatography–electrosprayionization-mass spectrometry for determination of pharmaceuticalcompounds in the water samples
GENETICALLY ENGINEERED MICROORGANISMS FOR
POLLUTION MONITORING
Immobilization and integration into biosensors
No matter the type of modification used the bacteriareporter strain has to be sophisticated and for itsspecific use it must be immobilized to a bioactivemembrane to achieve and attain its final purpose ofdetection of whatever particular type of substance ithas been tailored for .So for this purpose it is take awayfrom its boundaries of the lab and taken to the beadhered or incorporated into a biosensor divide thatensures protection and maintenance along with easeof storage ease of sample access and transduction ofsignals. For this it may be impregnated into strontiumalginate. onto optic fiber tips (48) immobilization inagar (49)and encapsulation in gel matrices
bioavailability of nutrients.
• After observing the phenomenon of eutrophication ofalgal blooms which occur in the presence of nitrogen andphosphorus in excess a novel branch of bioreporters wasconstructed which worked on the principle of nutrientbioavailability. Nitrogen and phosphorus clearly don’tmake it t the top of the most deleterious pollutants listbut the principle of eutrophication was used to tailor
• Synechococcus sp. with a glnA::lux fusion and aSynechocystis sp containing a nblA::lux fusion each servesas a sensitive reporters nitrogen bioavailability. Theformer is specific for ammonia, nitrite and organicnitrogen on the contrary the latter is specific for nitratealone.
Detection of specific pollutants
• The first constructs to detect specific inorganic and organic pollutants fordetermining the bioavailability and catabolic activity and potential inwater bodies like streams and rivers a genetically modified bioluminescentbacteria Psuedomonas flouresens HK44 was employed.
• It bears a fused transcriptional fragment nahG-"uxCDABE responsible fornaphthalene and salicyclate catabolism.
• exposure of either compounds induced bioluminescence. The cells of P.flouresens were immobilized in strontium alginate to make an opticalbased whole-cell biosensor for monitoring of bioavailability ofnaphthalene and salicylate in streams of waste water.
• On exposure to additional compounds for instance glucose,toluene,complex nutrient medium either showed nill or weak bioluminescenceincreases produced after delayed response times compared tonaphthalene.
References
• Sagi, E., Hever, N., Rosen, R., Bartolome, A. J., Premkumar, J. R., Ulber, R., Lev, O.,T., Belkin, S., 2003, Fluorescence and bioluminescence reporter functions ingenetically modified bacterial sensor strains, Sens. Actuators B-Chem. 90:2–8.
• Sayler, G. S., Simpson, M. L., Cox, C. D., 2004, Emerging foundations: nano-engineering
• and bio-microelectronics for environmental biotechnology, Curr. Opin. Microbiol.7:267– 273.
• Selifonova, O., Burlage, R., Barkay, T., 1993, Bioluminescent sensors for detectionof bioavailable Hg(II) in the environment, Appl. Environ. Microbiol. 59:3083–3090.
• Shao, C. Y., Howe, C. J., Porter, A. J. R., Glover, L. A., 2002, Novel cyanobacterialbiosensor for detection of herbicides, Appl. Environ. Microbiol. 68:5026–5033.
• Stiner, L., Halverson, L. J., 2002, Development and characterization of a greenfluorescent
protein-based bacterial biosensor for bioavailable toluene and relatedcompounds, Appl. Environ. Microbiol. 68:1962–1971.
• Southward, C. M., Surette, M. G., 2002, The dynamic microbe: green fluorescentprotein brings bacteria to light, Mol. Microbiol. 45:1191–1196.