Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled...

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Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November, 2011, Marseilles, France Arvanitidis C, Faulwetter S, Vandepitte L, Claus S, Appeltans W, Vasileiadou A, Chatzigeorgiou G, Chatzinikolaou E, Vanden Berghe E, et al....……… and many other data providers…

Transcript of Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled...

Page 1: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled

during the MarBEF NoE

BioDivMed Workshop, 08-09 November, 2011, Marseilles, France

Arvanitidis C, Faulwetter S, Vandepitte L, Claus S, Appeltans W, Vasileiadou A, Chatzigeorgiou G, Chatzinikolaou E, Vanden Berghe E, et al....…

……… and many other data providers…

Page 2: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

• Sine qua non Custodians want to have formal agreements before

willing to share data

• Open only to people sharing data in MarBEF Theme 1

• Co-authorship is not sufficient Scientists want to be involved in the creative

process of hypothesis generation and testing

Data policy: DMU for data sharing, or how Data policy: DMU for data sharing, or how

to involve more datasets and expertiseto involve more datasets and expertise

Page 3: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

MacroBen database: MacroBen database: a scientific experiment never attempted so fara scientific experiment never attempted so far

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MacroBen: first results on a MacroBen: first results on a pan-european scalepan-european scale

Objective: to test the validity of the proposed systems for the division of the European seas, against pre-determined criteria.

MarBEF Theme 1 publication (Theme Section): Marine Ecology Progress Series 382: 221-311

Page 5: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Question:What divisions?

• OSPAR (including Mediterranean & Black Seas)

• Fredj’s regions

• IHO large areas

• LMEs

• Longhurst’s regions

• ICES (including Mediterranean & Black Seas)

Page 6: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Question:What divisions?

Page 7: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Faunal groups used:

• Benthos• Benthos relaxed• Polychaetes• Mollusks• Echinoderms• Crustaceans• Sipunculans

Page 8: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Criteria

- proximity (multivariate analyses)

- randomness (TD funnels)

- differentiation (3rd stage MDS)

Page 9: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Longhurst’s provinces; benthos nMDS

Page 10: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Longhurst’s provinces; Longhurst’s provinces; ΔΔ++ benthosbenthos

Page 11: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Longhurst’s provinces; Longhurst’s provinces; ΛΛ++ benthosbenthos

Page 12: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Longhurst’s provinces; Longhurst’s provinces; ΔΔ++ polychaetespolychaetes

Page 13: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Longhurst’s provinces; Longhurst’s provinces; ΛΛ++ polychaetespolychaetes

Page 14: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Polychaeta across systemsPolychaeta across systems

Page 15: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Faunal groups within Longhurst’s systemFaunal groups within Longhurst’s system

Page 16: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Results

Performance of the groups: Performance of the groups:

the “biogeographic paradox” the “biogeographic paradox”

Page 17: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

The LargeNet attempt

Page 18: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

The LargeNet attempt

• Soft macrobethos• Rocky macrobenthos• Soft polychaeta• Meiofauna (MANUELA)• Rocky macrophytes• Rocky Cromista• Phytoplankton• Zooplankton

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The MANUELA attempt

Meiofauna

Resemblance: S7 Jaccard

ARCT

MEDI

NADR

NAST-ENECS

SARC

2D Stress: 0

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The MANUELA attempt

Meiofauna

0 500 1000 1500Number of species

50

60

70

80

90

De

lta+

ARCTBALT

MEDI

NADR

NAST-E NECS

SARC

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The LargeNet attempt

Macrophytes

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The LargeNet attempt

Macrophytes

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The LargeNet attempt

Phytoplankton

Resemblance: S7 Jaccard

ARCT

MEDI

NADR

NAST-E

NECS

SARC

2D Stress: 0

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The LargeNet attempt

Phytoplankton

0 200 400 600 800Number of species

60

70

80

90

100

De

lta+

ARCT MEDI

NADRNAST-E

NECS

SARC

BALT

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Comparisons......• Second-stage MDSSecond-stage MDS

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Comparisons......

• Are we on the right path? Are we on the right path?

• Do we have BIAS in our datasets?Do we have BIAS in our datasets?

• WHAT bias?WHAT bias?

Page 27: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Comparisons......

Can we face it? HOW?

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The way forward…

Large Projects and initiatives

http://www.tdwg.org/biodiv-projects/

Database Summary

Biodiversity Projects

Number of Projects: 664

Fully Documented Projects: 664

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The way forward…

Virtual Biodiversity Research and Access Virtual Biodiversity Research and Access

Network for Taxonomy Network for Taxonomy

http://vbrant.eu

Page 30: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Virtual Biodiversity Research and Access Network for Taxonomy (ViBRANT)

(www.vbrant.eu)

Context: to deploy end-to-end e-Infrastructure services and tools, capturing the life cycle of biodiversity research from inception to publication in an open digital environment.

User oriented: an approach, enabling multidisciplinary groups to create their own virtual research communities, supporting biodiversity science.

Ambition: to change the conventional way taxonomy currently functions and to bring it to the forefront of the biodiversity discipline.

The way forward…

Page 31: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Where taxonomy is now......

from Hobbes’ Internet timeline (http://bit.ly/dtBJ2i)

The 1st Internet4-node ARPAnet - 1969

The way forward…

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...and where we might like to be…

from Hobbes’ Internet timeline (http://bit.ly/dtBJ2i)

You arehere

• Built of links• 1 trillion pages• 2 billion users

The way forward…

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The way forward…

http://bio.emodnet.eu/portal/http://bio.emodnet.eu/portal/

http://www.lifewatch.euhttp://www.lifewatch.eu

VECTORS: Vectors of Change in Oceans and VECTORS: Vectors of Change in Oceans and

Seas Marine Life, Impact on Economic Seas Marine Life, Impact on Economic

Sectors Sectors

http://www.marine-vectors.euhttp://www.marine-vectors.eu

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EMBOS: Development and implementation EMBOS: Development and implementation

of of a pan-European Marine Biodiversity a pan-European Marine Biodiversity

Observatory System Observatory System http://www.cost.esf.org/domains_actions/essem/Actions/ES1003r

EVAMAP: EVOLUTION AND ADAPTATION OF MARINE EVAMAP: EVOLUTION AND ADAPTATION OF MARINE

POPULATIONS IN A TEMPORALLY AND SPATIALLY POPULATIONS IN A TEMPORALLY AND SPATIALLY

VARIABLE ENVIRONMENTVARIABLE ENVIRONMENT

https://sites.google.com/site/platon2010evamap/https://sites.google.com/site/platon2010evamap/

The way forward…

Page 35: Biodiversity pattern interrelations in ecosystem components: a synthesis from the databases compiled during the MarBEF NoE BioDivMed Workshop, 08-09 November,

Thank youThank you(on behalf of the co-authors)(on behalf of the co-authors)

- Join the MedOBIS mailing list- Join the MedOBIS mailing list

- Make your datasets available through - Make your datasets available through

the MedOBIS portalthe MedOBIS portal

[email protected]@hcmr.gr