Biochemistry of Extracellular Matrix Jana Novotná.
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Transcript of Biochemistry of Extracellular Matrix Jana Novotná.
• Cells (mesenchymal origin)
- fibroblasts
- smooth muscle cells
- chondroblasts
- osteoblasts and epitelial cells
• Organic fibrillar matrix• Organic nonfibrillar matrix• Water
Composition of Extracellular Matrix (ECM)
Function of ECM
• Provides support and anchorage for cells.• Regulates and determine cells dynamic behaviour :
- polarity of cells- cell differentiation- adhesion- migration
• Provides mechanical support for tissues and organ architecture
- growth- regenerative and healing processes - determination and maintenance of the structure
• Place for active exchange of different metabolites, ions, water.
Structure of ECM
• collagen – the main ECM component, forms the main fibres
• elastin
• proteoglycans - heteropolysacharides
• structural glycoproteins - fibronectin, laminin
Collagen
• The most abundant protein in the body, making 25%-35% of all the whole-body proteins.
• Collagen contributes to the stability of tissues and organs.
• It maintains their structural integrity.
• It has great tensile strenght.
• The main component of fascia, cartilage, ligaments, tendons, bone and skin.
• Plays an important role in cell differentiation, polarity, movement.
• Plays an important role in tissue and organ development.
Collagen is insoluble glycoprotein (protein + carbohydrate)
Collagen polypeptide primary structure:
- G – X – A – G – A – A – G – Y – A – G – A – A – G – X – A – G −,G - glycine, X - proline or hydroxyproline, Y – lysin or hydroxylysine, A – amino acid
Proline and hydroxyproline constitute about 1/6 of the total sequence, provide the stifness of the polypeptide chain.
Carbohydrates : glucose, galactose
Collagen Structure
• Three helical polypeptide units twist to form a triple-helical collagen molecule: a molecular "rope" which has some bending stiffness and does not undergo rotation. • The tropocollagen molecule has a length of approximately 300 nm and a diameter close to 1.5 nm.• In the typical fibrillar collagens, only short terminal portions of the polypeptides (the telopeptides) are not triple helical.
1. Synthesis of a chains of pre-procollagen on ribosomes.
2. Hydroxylation of lysine and proline in rER/Golgi by lysyl-5-hydroxylase and prolyl-4-hydroxylase.
3. Glycosylation: addition of galactose and glucose to some hydroxylysine residues (galactosyl transferase and glycosyl transferase).
4. Assembly of -chains to form procollagen. Reaction needs the formation of disulphide bonds between registration peptides, at both ends of the prepro- collagen.
Synthesis
5. Secretion of procollagen molecules by exocytosis into the extracellular space.
6. Cleavage of registration peptides is catalysed by procollagen peptidases. The resulting molecule is called tropocollagen.
7. Oxidation – deamination of the hydroxylysine, the removal of (NH2) group has a net oxidative effect and the formation of covalent cross-links. Reaction is catalyzed by lysyl oxidase (or catalase).
8. Self-assembly or polymerization of tropocollagen molecules form collagen fibrils. Cross-linkage between adjacent tropocollagen molecules stabilizes the fibrils.
Hydroxylation of some prolyl and lysyl residuesprolyl-4-hydroxylase, lysyl-5-hydroxylaseCofactors:
O2 (or superoxid)-ketoglutarateFe2+
vitamin C (ascorbic acid)Proline + -ketoglutarate + O2 + Fe2+ → 4-hydroxy-proline + Fe3+ + CO2 + succinate
Hydroxyproline stabilizes molecule of tropocollagen.
Posttranslation Modification of Collagen Molecule
The typical staggered array of tropocollagen molecules in the collagen fibril. The telopeptides participate in covalent crosslinking.
Collagen – Fiber Formation
Collagen types I, II, III, V, IX, X
Cross striated structure of collagen fiber reflect periodic comosition of individual tropocollagen molecules.Collagen fibrils of 1 mm diameter support the weight of 10 kg.
Collagens Classification
1. Fibril-forming collagens (I, II, III, V, X)
2. Fibril-associated collagens (FACIT)
3. Network-forming collagens
4. Anchoring fibrils collagens
5. Transmembrane collagens
6. Basement membrane collagens
7. Other collagens with unique function
Major Collagen Types
Type Molecular composition
Tissue distribution
I [ )] Bone, dermis, tendon, ligaments cornea
II [(II)]3 Cartilage, vitreous body, nucleus pulposus
III [1(III)]3 Skin, vessel wall, reticular fibres of most tissues (lung, liver, spleen, etc)
V
XI
1(V)2(V)3(V)
1(XI)2(XI)3(XI)
Lung, cornea, bone, fetal membranes, together with type I collagen
Cartilage, vitreous body
Fibril forming collagens(Most abundant collagen family - 90 % of the total collagens)
Basement membrane collagens
IV 1(IV)2V)]; 1 – 6 Basement membrane
Short non-helical amino-terminal domain, a long Gly-X-Y repeat domain with numerous small interruptions, and a highly conserved carboxyl-terminal globular NC1 domain. It polymerizes into a disulfide-bonded polygonal network via tetramerization between amino-terminal domains and dimerization between NC1 domains.
• Elastin is a major protein component of tissues that require elasticity such as arteries, lungs, bladder, skin and elastic ligaments and cartilage.
• It is composed of soluble tropoelastin protein containing primarily glycine and valine and modified alanine and proline residues.
• Tropoelastin is a ~65kDa protein that is highly cross-linked to form an insoluble complex.
• Polypeptide chains are cross-linked together to form rubberlike, elastic fibers. Each elastin molecule uncoils into a more extended conformation when the fiber is stretched and will recoil spontaneously as soon as the stretching force is relaxed.
Elastin
Jaime Moore , Susan ThibeaultJournal of Voice Volume 26, Issue 3 2012 269 - 275
• Desmosine (isodesmosine) - the most common interchain cross-link
• conversion of NH3 groups of lysine (hydroxylisine) to reactive aldehydes by lysyl oxidase.• desmosine cross-link is spontaneously formed.
Elastin
Proteoglycans Special class of glycoproteins heavily glycosylated (95%).
Core protein with one or more attached glycosamino glycan chain(s).
Glycosaminoglycans (GAG)
• Long chain, linear carbohydrate polymers • Negatively charged under physiological
conditions (due to the occurrence of sulfate and uronic acid groups).
Disaccharide subunits are:1. uronic acidD-glucuronic acid or L-iduronic acid2. aminosugarN-acetyl glucosamin (GlcNAc) orN-acetyl galactosamin (GalNAc)
Amino sugars and uronic acids are the most common building blocks of the glycosaminoglycans. • amino sugars -OH at C-2 is replaced by an amino group. This amino group is most often acetylated and sometimes sulfated. • uronic acids C-6 of the hexose is oxidized to a carboxyl group.
Biosynthesis
• The protein component is synthesized by ribosomes and transocated into the lumen of the RER.
• Glycosylation of the proteoglycan occurs in the Golgi apparatus in multiple enzymatic steps.
• First a special link tetrasaccharide is attached to a serine side chain on the core protein to serve as a primer for polysaccharide growth.
Biosynthesis
• Then sugars are added by glycosyltransferase.• Some glycosyltransferases catalyse sugar transfer to
tyrosine, serine and threonine to give O-linked glycoproteins, or to asparagine to give N-linked glycoproteins.
• Mannosyl groups may be transferred to tryptophan to generate C-manosyl tryptophan
• The completed proteoglycan is then exported in secretory vesicles to the extracellular matrix of the cell.
Glycosaminoglycan Occurence
Proteoglycans can be categorised depending upon the nature of their glycosaminoglycan chains.
• Hyaluronic acid (does not contain any sulfate)– non-covalent link complex with proteoglycans
• Chondroitin sulfate – cartilage, bone
• Dermatan sulfate – skin, blood vessels
• Heparan sulfate – basement membrane, component of cells surface
• Keratan sulfate– cornea, bone, cartilage, often aggregated with chondroitin
sulfate
Function of Proteoglycans• organize water molecules
- resistent to compression- return to original shape- repel negative molecules
• occupy space between cells and collagen• high viscosity
- lubricating fluid in the joints• specific binding to other macromolecules• link to collagen fibers
- form network
- in bone combine with calcium salts (calcium carbonate, hydroxyapatite)• cell migration and adhesion
- passageways between cells• anchoring cells to matrix fibers
Structural Glycoproteins
• Direct linkage to collagen or proteoglycans– anchoring collagen fibers to cell membrane– covalent attachment to membrane lipid
• Major adhesive structural glycoproteins– fibronectin– laminin
Fibronectin
• High-molecular weight (~440kDa) glycoprotein • Attached to cell membrane by membrane-spanning
receptor – integrin.• Crosslinks and stabilizes other components of ECM • Enhances cell addhesion to extracellular matrix
components (collagen, fibrin and heparansulfate proteoglycans).
• Related to blood clotting - soluble FN crosslinks platelets together using membrane bound heparin
Fibronectin Structure
• protein dimer connected at C-terminal by S-S linkage• rigid and flexible domains• cell binding domain RGD
(Arg, Gly, Asp) - binding receptor in cell membranes
• RGD domain binds to - collagen type I, II and III - heparin sulfate - hyaluronic acid - fibrin
Fibronectin Function
• related to cell adhesion, differentiation, growth, migration;
• anchoring basal laminae to other ECM;
• plasma fibronectin forms a blood cloth, along with fibrin;
• related to cell movement - groups of embryonic cells follow a FN pathway - FN guides macrophages into wound areas.
Laminin structure and function
• cross-shaped glycoprotein• 3 polypeptide chains• domain bind - collagen type IV - heparin - heparin sulfate
• cell surface receptor RGD• cell adhesion• role in cell differentiation• anchoring the glycoprotein to basal laminae
Fibrillin • Glycoprotein, essential for
formation of elastic fibers (a sheath surrounding the amorphous elastin)
• Produced by fibroblasts. • A group of three proteins, fibrillin-
1, -2 and -3. • The main role - maintaining the
structural integrity of tissues, the regulation of cytokines – TGF-
• In humans, defects in the fibrillin-1 and fibrillin-2 genes have been linked to diseases that affect the cardiovascular, skeletal and ocular systems, including Marfan syndrome.
Integrins
• Groups of transmembrane protein receptors
• The bridges for cell-cell and cell-ECM interactions.
• Mediate the attachment between a cell and its surroundings.
• Integrins perform outside-in signaling and they also operate an inside-out mode, trigger chemical pathways – signal transduction - which results in a response (activation of transcription) such as regulation of the cell cycle, cell shape, etc.)
• Link cytoskeleton to ECM• Fibronectin receptor is best known
Tenascins
• Abundant in the extracellular matrix of developing vertebrate embryo.
• Tenascin-C contains an RGD motif and is recognized by diverse integrins. Mainly synthesized by the nervous system and connective tissues.
• Tenascin-R is found in the nervous system• Tenascin-X and tenascin-Y are found primarily in muscle
connective tissues.• Tenascin-W is found in kidney and developing bone.