Bibliographic Resources Fredj Tekaia Institut Pasteur [email protected] EMBO Bioinformatics and...

Bibliographic Resources

Fredj TekaiaInstitut Pasteur

[email protected]

EMBO Bioinformatics and Comparative Genome Analyses Course

Institut Pasteur Paris

June 27 - July 9, 2011

EMBO Bioinformatics and Comparative Genome Analyses Course

Institut Pasteur Paris

June 27 - July 9, 2011

mailto:[email protected]

• Bibliography is essential in research activities

• Researchers have to keep tract of the flow of scientific works that are regularly published

• Today this task is facilitated by the online availability of scientific journals.

Plan:• Bibliographic resources: (paper & electronic journals)

• News groups related to Bioinformatics and Genome analyses

We will show links to some significant journals and sites in Bioinformatics and in Genome Research Activities.

A Science Primer

QuickTime™ et undécompresseur TIFF (non compressé)

sont requis pour visionner cette image.

http://www.ncbi.nlm.nih.gov/About/primer/

PubMed (@ncbi):

http://www.ncbi.nlm.nih.gov/pubmed/

Abstracts and full papers.

The easiest way is:

QuickTime™ et undécompresseur TIFF (LZW)


http://www.ncbi.nlm.nih.gov/pubmed

PubMed Central: A free archive of life sciences journals:

http://www.ncbi.nlm.nih.gov/pmc/



http://www.ncbi.nlm.nih.gov/pmc/

Journals

(paper & electronic forms)

"Sign in" to receice regularly Table Of Contents (TOC)




sont requis pour visionner cette image.http://www.nature.com/


sont requis pour visionner cette image.http://www.nature.com/nature/current_issue.html



Each Thursday




sont requis pour visionner cette image.http://www.sciencemag.org/magazine

Each Friday

nature Omics Gateway: http://www.nature.com/omics/subjects/index.html


sont requis pour visionner cette image.http://www.nature.com/nrg/index.html




sont requis pour visionner cette image. http://genome.cshlp.org/

NAR: http://nar.oxfordjournals.org/




sont requis pour visionner cette image. http://bioinformatics.oxfordjournals.org/

Plos journals:

Plos Biology: http://www.plosbiology.org/home.action

Plos genetics: http://www.plosgenetics.org/home.action

Plos Computational Biology: http://www.ploscompbiol.org/home.action

Ten simple Rules collection:http://www.ploscollections.org/article/browseIssue.action?issue=info%3Adoi%2F10.1371%2Fissue.pcol.v03.i01









http://www.plosbiology.org/home.action

http://www.plosgenetics.org/home.action

http://www.ploscompbiol.org/home.action




sont requis pour visionner cette image. http://www.ploscompbiol.org/home.action

Ten simple rules: http://www.ploscompbiol.org/


sont requis pour visionner cette image.QuickTime™ et un

décompresseur TIFF (LZW)sont requis pour visionner cette image.













Some guiding papers on Bioinformatics:http://www.ploscompbiol.org/

QuickTime™ et undécompresseur
















http://www.biomedcentral.com/browse/journals/

QuickTime™ et undécompresseur TIFF (LZW)sont requis pour visionner cette image.









http://genomebiology.com/




sont requis pour visionner cette image.http://www.biomedcentral.com/bmcbioinformatics/

QuickTime™ et undécompresseur TIFF (LZW)sont requis pour visionner cette image.



http://www.biomedcentral.com/bmcgenomics/





http://www.biomedcentral.com/bmcevolbiol/

Publishing your Research

http://www.sfedit.net/

Publishing your Research

http://pubs.acs.org/page/publish-research/index.html

Publishing your Research: Writing papershttp://pubs.acs.org/page/publish-research/episode-1.html

http://pubs.acs.org/page/publish-research/episode-1.html

Scientific work evaluation

Scientific Work Evaluation: h-index

Web of Sciences (ISI): http://en.wikipedia.org/wiki/ISI_Web_of_Knowledge

Scopus: http://en.wikipedia.org/wiki/Scopus

Google Scholar: http://code.google.com/p/citations-gadget/

Definition: h-indexA scientist has index h if h of [his/her] Np papers have at least h citations each, and the other (Np − h) papers have at most h citations each.

The h-index is an index that attempts to measure both the productivity and impact of the published work of a scientist.

http://en.wikipedia.org/wiki/Index_(economics)

http://en.wikipedia.org/wiki/Scientist

Scientific work Evaluation : h-index and citations

ISI web knowledge: http://isiwebofknowledge.com/

Citation and journal database. Requires authentication and login.

http://isiwebofknowledge.com/

Citations follow up of a publication.

Try an example

Ranking UniversitiesTHE (Times High Education) World University Ranking:

http://www.timeshighereducation.co.uk/world-university-rankings/2010-2011/top-200.html



Ranking Web of World Universities (spanish lab): http://www.webometrics.info/



Top 12000 Universities



http://www.topuniversities.com

News Groups

News Groups

net.bio.net Mailing Lists

http://www.bio.net/biomail/listinfo/

Lists all the public mailing lists on net.bio.net.QuickTime™ et un

décompresseur TIFF (LZW)sont requis pour visionner cette image.QuickTime™ et un



sont requis pour visionner cette image.QuickTime™ et un





http://www.bio.net/biomail/listinfo/Lists all the public mailing lists on net.bio.net.




News Groups

Bionews: http://www.bio.net/biomail/listinfo/bionews

• BIOSCI newsgroup BIONEWS / bionet.announce is for Announcements of widespread interest to biologists. (Moderated)

• To see the collection of prior postings to the list, visit the Bionews Archives: http://www.bio.net/bionet/mm/bionews/

• Subscribing to Bionews (to receive all e-mails sent to this news group)

• To post a message to all the list members, send email to [email protected]



http://www.bio.net/bionet/mm/bionews/

http://www.bio.net/bionet/mm/bionews/



News Groups

Bionews:







PhD Positions

PhDs.orghttp://www.phds.org/



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