Basic Concepts of Scientific Writing.ppt

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    Academic and Scientific Writing:Some Basic Principles

    Elias Sukardi

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    Academic writing

    versus

    scientific writing?

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    What makes a good piece of writing

    It answer the question set.

    It demonstrates understanding and clarity of thought.

    It provides evidence of reading and research.

    It supports any assertions by evidence. It is well structured.

    It is written in an appropriate style.

    It flows logically from one section to another, and from

    one paragraph to another. It is appropriately referenced.

    It is interesting to read.

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    The maxim for scientific writing

    Write clearly to clarify your own thinking(Writing for clarity)

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    Words

    Sentences

    Paragraphs

    to produce a clear and

    coherent story

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    Scientific English

    Avoiding superfluous words and phrases

    Choosing a better word

    Identifying imprecise words and phrases

    Using the active and passive voices

    appropriately

    Using the tenses properly

    Applying the punctuation correctly.

    Writing paragraphs

    Understanding & compiling references

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    Word choice

    Renal blood flow was drastically

    compromisedwhen the aorta was

    obstructed. (greatly reduced/decreased)

    The salicylates are rapidly absorbed witha

    peak plasma concentration within 2 hours.

    (reaching/attaining)

    Fentanyl was administeredintravenously

    (given)

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    Sentence Structure

    Express the core of the message in the

    subject, verb, and completer.

    Avoid noun clusters

    Write short sentences

    Appropriate use of the tenses.

    Use clear pronoun Put parallel ideas in parallel form

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    Express the core of the message in the

    subject, verb, and completer

    The patient showed no change in symptoms.

    The patient's symptoms did not change.

    The patient's symptoms were unchanged.

    The patient was begun on 0.6 g of aspirin daily

    and had resolution of the arthritis

    After the patient began taking 0.6 g aspirin daily,his arthritis resolved.

    Aspirin 0.6 g daily resolved the patient's arthritis.

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    A progressive decrease in the death rate

    occurred.

    The death rate decreased progressively.

    The death rate progressively decreased.

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    Prolongation of life for uremic patients has

    been made possible by improved conservative

    treatment and hemodialysis.

    The lives of uremic patients have beenprolonged by improved conservative treatment

    and hemodialysis.

    Improved conservative treatment and

    hemodialysis have prolonged the lives ofuremic patients.

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    Avoid noun clusters

    One noun is commonly used to modifyanother noun in English, e.g. "blood flow",

    "protein metabolism", "lung function",

    "kidney disease", "oxygen therapy"

    "blood volume", etc.

    Filament length variabilityVariability of the length of the filaments

    Variability of filament length

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    Write short sentences

    Short sentences are easier to understand

    than long sentences. Do not pack too

    many ideas into one sentence. Avoid

    overloaded sentences!

    Use the active and passive voices appropriately!

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    Using the tenses appropriately

    The structure of research paper

    Introduction usually in the past tense

    Materials andmethods

    Results usually in the past tense

    Discussion

    References

    Figures legends in the present tense

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    Smith reports that (present tense)

    (Refers to just-published paper of currentimportance)

    Smith has reported that (present perfect tense)

    (Refers to recent past and implies'continuing intellectual importance')

    Smith reported that (past tense)

    (Refers to a past & completed event )

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    Use clear pronoun

    "To decrease blood volume by about 10%

    in a few minutes, blood was pooled in the

    subjects' legs by placing wide congesting

    cuffs around the thighs and inflatingthem to diastolic brachial arterial pressure.

    the cuffs.

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    Put parallel ideas in parallel form

    Parallel ideas are ideas that are equal in

    logic and importance.

    Examples: ideas that are joined by "and"

    "or" or "but" or ideas that are being

    compared.

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    Cardiac output was less in the E. coli group

    than the pseudomonas group.

    Cardiac output was less in the E. coli groupthan in the pseudomonas group.

    Left ventricular function was impaired in thedogs that received endotoxin but not the control

    dogs

    Left ventricular function was impaired in the

    dogs that received endotoxin and not inthe

    control dogs

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    The children with arteriovenous shunts

    had the shunts opened, heparin injected,and the arterial and venous sides of the

    shunt clamped.

    In the children who had arteriovenous

    shunts, the shunts were opened, heparin

    was injected, and the arterial and venous

    sides of the shunt were clamped.

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    An increased in heart rate occurred.

    Heart rate increased.

    The new drug caused a decrease in

    heart rate.

    The new drug decreased heart rate.

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    Evaporation of ethanol from themixture takes place rapidly.

    Ethanol evaporates rapidly from themixture.

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    Tumors greater than 10 cm indiameter are associated with poor

    prognosis..

    Patients with tumors greater than

    10 cm in diameter are associated

    with poor prognosis.

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    The etiology of delusion ofpregnancy is likely to beheterogeneous.

    The etiology of delusion ofpregnancy is likely to bemultifactorial.

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    The first study was abandoned dueto poor patient compliance.

    Owing to poor compliance by thepatients the first study wasabandoned.

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    The study involved 15 consentinghealthy adult males.

    Fifteen consenting and healthysubjects took part in the study.

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    Punctuation

    Some Rules of Punctuation

    A semi-colon (;) is almost a full stop;

    Use a colon (:) to introduce a list;

    Separate the items on a list by commas (,) not

    semi-colons (unless the items could

    themselves be sentences or have commas

    within them);

    Never separate a subject from its verb by asingle punctuation mark.

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    Period (full stop).(.)

    Quotation mark (single or double) '' ""

    Question mark: ?

    Exclamation mark: !

    Slash: / Dash: Hyphen: -

    Apostrophe: '

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    Writing Paragraph

    Send a clear message and tell a clear

    story

    Organization: Deductive paragraph

    Continuity

    Emphasis: emphasize important

    information and de-emphasize less

    important information

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    NutritionNutrition is the science of food and its relationship to health.

    Nutrients are chemicals in foods that are used by the body

    for growth, maintenance, and energy. Nutrients that cannot

    be synthesized by the body and thus must be derived from

    the diet are considered essential. They include vitamins,

    minerals, some amino acids, and fatty acids. Nutrients that

    the body can synthesize from compounds, although theymust also be derived from the diet, are considered

    nonessential. Macronutrients are required by the body in

    relatively large amounts; micronutrients are needed in

    minute amounts.Lack of nutrients can result in deficiency syndromes (e.g.

    kwashiorkor, pellagra) or other disorders. Excess intake of

    macronutrients can lead to obesity; excess intake of

    micronutrients can be toxic.

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    Questions

    1) How manyparagraphs are found in the

    passage?

    2) What is main message/thought/ideaof

    each paragraph?

    3) How isparagraph 1constructed?

    Explain your answer!

    4) What do you think about the construction

    ofparagraph 2? Explain your answer!

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    Suggested answers

    1) Two paragraphs

    2) Paragraph 1: The concepts of nutrition

    3) Paragraph 2: Clinical patterns of nutritional disorders

    4) Paragraph 1: Deductive paragraph

    Function of nutrients

    Types of nutrient: essential/nonessential nutrients;

    macro/micro-nutrients

    Paragraph 2: Topic sentence is missing, but themain thought is implicit in the message of the paragraph.

    It resembles a (modified) deductive paragraph.

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    Nutrition

    Definition of nutrition (Food)

    Nutrients (Chemicals)

    Types of nutrients (Types of chemicals)

    Essential and nonessential nutrients

    Macronutrients and micronutrients

    Deductive Paragraph

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    Write a deductive paragraph!

    Specific

    General

    Specific Specific Specific

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    Why should we learn to write well?

    Becoming a better physician/clinician

    As part of our professional carrier

    Competing in the job market Fame

    Lifestyle

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    The Anatomy of Thesis

    or Research Paper

    Title

    Abstract

    Introduction Materials and Methods

    Results

    Discussion

    (Summary)

    References

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    Basic principles for writing the sections

    Title: Insulin Increases Hepatic Glycolysis and

    Glucoce Uptake of Myocyte

    Introduction

    The question or problem to be answered Brief, 2-3 paragraphs

    Aim and scope of the paper

    Purpose for undertaking the work How your investigation moves from closely

    related previous works

    Try to gain and keep the attention of the readers

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    Materials and Methods

    How the answer was sought(Credibility evidence)

    Justify your choice of the materials and

    methods used State the premises and assumptions made

    Audience: Colleagues with similar researchexperience

    Give the genus, species, race, strain, breed ofthe experimental animals used

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    Results

    Comprehensible and coherent

    Present your results in a logical order

    Report negative results of possible

    importantance to other workers

    Describe the measurements obtained

    Use tables and diagrams as needed

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    Discussion

    A discussion is a disquisition in whichsubject is treated from different sides

    Write this section only after you have

    thought long and hard about your ownand other peoples findings

    You may criticize the scientific basis of

    other peoples workDo not conceal negative results or

    discrepancies

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    Citing references

    Norcini JJ. Peer assessment of

    competence. Med Educ 2003;37:539-43.

    Chang JT, Hays RD, Shekelle PG, et al.

    Patients' global ratings of their health care

    are not associated with the technical

    quality of their care. Ann Intern Med2006;144:665-72.

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    Chemotherapeutic options in chronic lymphocytic

    leukemia: a meta-analysis of the randomized trials. CLL

    Trialists' collaborative Group. J Natl Cancer Inst1999;91(10):861-8. (PUBMED Abstract)

    Maddock-Christianson K, Slager SL, Zent CS, et al: Risk

    factors for development of a second lymphoid

    malignancy in patients with chronic lymphocyticleukemia. Br J Haematol 2007;139(3):398-404. (PUBMED

    Abstract)

    Robertson LE, Pugh W, O'Brien S, et al: Richter

    syndrome: a report on 39 patients. J Clin Oncol1993;11(10):1985-9. (PUBMED Abstract)

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    Further reading

    OConnor M, Woodford FP: Writing scientificpapers in English. Amsterdam: ExcerptaMedica, 1977

    Goodman NW, Edwards MB: Medicalwriting: A prescription for clarity. Cambridge:Cambridge University Press, 2nded. 1997

    Murrell G, Huang C, Ellis H: Research inmedicine: Planning a project - writing athesis.2nded. Cambridge: CambridgeUniversity Press,1999