Arrest, Crystallization and Surfaces Properties of ...
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Arrest, Crystallization and Surfaces Properties of Amorphous Materials
Computer Simulations and Future Challenges in Amorphous Materials
Peter HarrowellSchool of Chemistry
University of Sydney
2019 International Graduate Summer School on “Frontiers of Soft Matter and Amorphous Materials”
Outline of Lectures
Lecture 1. Structure in Liquids and its Consequences
Lecture 2. Dynamics: Spatial Heterogeneities and its Link to Structure
Lecture 3. Amorphous Surfaces: Kinetic Enhancement and Surface-Mediated Glass Fabrication
The Kinetic Arrest of a Supercooled Liquid is Called the Glass Transition
Hawaii volcano fills sky with acid plumes and glass shards as lava hits sea 22 May 2018
“Pele’s Hair” – glass fibres formed during rapid stretching and cooling of lava
obsidian
pumice outcrop, Kamchatka Peninsula
Dynamics: Spatial Heterogeneity and the Link to Structure
Tm
Glass Supercooled Liquid
Glass transition
halpy
Temperature
Crystal
fast cooling
slow cooling
The glass state is a consequence of the liquid slowing down sufficiently to fall out of equilibrium
Structural Explanations of Dynamics
These are generally difficult since dynamics disrupts the very structure that we would use to explain it.
Defect mediated dynamics is one case in which most of the structural features are persistent.
1. Diffusing defect theory
2. ‘Zipper’ motion of defects in a random tiling phase
3. Grain boundary mobility …….
Diffusing Defect Model of Relaxation
Relaxation at a site occurs once a diffusing defect makes contact
JCP 33, 639 (1960)
Diffusing Defect Model of Relaxation
Relaxation at a site occurs once a diffusing defect makes contact
1/2
( ) exp tC tτ
= −
a ‘stretched’ exponential1D
JCP 33, 639 (1960)
Diffusing Defect Model of Relaxation
Relaxation at a site occurs once a diffusing defect makes contact
1/2
( ) exp tC tτ
= −
a ‘stretched’ exponential1D
Chem. Phys. Lett 32, 592 (1975)3D( ) exp tC t
τ = −
stretching lost !
JCP 33, 639 (1960)
Diffusing Defect Model of Relaxation
Relaxation at a site occurs once a diffusing defect makes contact
1/2
( ) exp tC tτ
= −
a ‘stretched’ exponential1D
Chem. Phys. Lett 32, 592 (1975)3D( ) exp tC t
τ = −
stretching lost !
3D ( ) exp tC tα
τ = −
stretching recovered in 3Dusing Levy walks
Diffusing Defects in a Random Tiling Phase
A binary mixture of soft discs can form a random tiling phase in 2D
Allowed local structures
Diffusing Defects in a Random Tiling Phase
A binary mixture of soft discs can form a random tiling phase in 2D
Allowed local structures
Defects (disclinations)
Diffusing Defects in a Random Tiling Phase
A binary mixture of soft discs can form a random tiling phase in 2D
Allowed local structures
Defects (disclinations)
Elementary ‘flip’
Passage of Defect Through the Random Tiling
Transitions from one random tiling to another are achieved by the passage of these defects.
Defects are possible in random arrangements
Passage of Defect Through the Random Tiling
Transitions from one random tiling to another are achieved by the passage of these defects.
Defects are possible in random arrangements
In these examples fluctuations are crucial to dynamics.
A mean field treatment would produce no motion since the disorder averaged over the sample would be locally insignificant
Diffusing Defect Models can be Characterised by Dynamic Heterogeneities
Instead of monitoring structure, we could just monitor dynamics.
In the case of diffusing defects, this would be sufficient to determine concentration and mobility of the objects – even if we could not explain why
they moved and other regions did not.
Models of Heterogeneous Dynamics in Amorphous Materials
Progress in understanding the relation between structure and relaxation dynamics has (and continues) to relay heavily on models.
It is important to understand the limits of each model
1. Facilitated Kinetic Ising Model2. Random Bond (Constraint) Model3. Molecular Dynamics
Fredrickson and Andersen, PRL 53, 1244 (1984)
Butler and Harrowell, JCP 95, 4454 (1991)
Simple thermodynamics of uncoupled spins
Complicated dynamics
A spin can’t flip unless n or more of it neighbours are up
- and the field h favours down spins
Dynamics and Structure:Facilitated Kinetic Ising Model
‘Facilitated kinetics ’ is, in retrospect, an misleading name – ‘structure determined kinetics’ is more accurate.
Dynamics and Structure:Facilitated Kinetic Ising Model
Relaxation (white) propagates out in time from ‘seeds’ whose concentration decreases with decreasing T
Unflipped spin (black)
Flipped spin (white)
Butler and Harrowell, JCP 95, 4454 (1991)
High Temperature
Dynamics and Structure:Facilitated Kinetic Ising Model
Relaxation (white) propagates out in time from ‘seeds’ whose concentration decreases with decreasing T
Note trapping of relaxation in small domains
Unflipped spin (black)
Flipped spin (white)
Butler and Harrowell, JCP 95, 4454 (1991)
Low Temperature
Dynamics and Structure:Facilitated Kinetic Ising Model
Relaxation ‘seeds’ are those that avoid being trapped by ‘walls’ of down spins
Butler and Harrowell, JCP 95, 4454 (1991)
As the concentration of up spins decreases, the probability of complete walls of larger extent increases
Dynamics and Structure:Facilitated Kinetic Ising Model
This model introduced the notions that dynamic heterogeneities might
a) exist as a generic feature of glass relaxation and
b) that these heterogeneities provided a real space signature of the ‘hidden’ structural fluctuations responsible for dynamics (i.e. the analogues if ‘defects’)
Butler and Harrowell, JCP 95, 4454 (1991)
Are these notions generally true?
Introducing a Non-Local Model of Heterogeneous Dynamics:
Constraint Model of Philips and Thorpe
Philips (1979), Thorpe (1983) provide a generic model of disordered solids and the non-local action of the constraints on particle motion.
Jacobs and Thorpe, PRE (1996)
A floppy structure consisting of 4 rigid clusters
(each linking bond is a rigid cluster of two particles)
Addition of one more bond results in single rigid cluster
Introducing a Non-Local Model of Heterogeneous Dynamics:
Constraint Model of Philips and Thorpe
Philips (1979), Thorpe (1983) provide a generic model of disordered solids and the non-local action of the constraints on particle motion.
Jacobs and Thorpe, PRE (1996)
A floppy structure consisting of 4 rigid clusters
(each linking bond is a rigid cluster of two particles)
Addition of one more bond results in single rigid cluster
The Dynamic Heterogeneity of Floppy Modes in a Constraint Network
Jacobs and Thorpe, PRE (1996)
overconstrained
marginally constrained
(= isostatic)
pivots associated with floppy modes
There is a clear but nontrivial connection between the spatial distribution of bonds and the distribution of floppy modes
Unconstrained Motion vs Floppy Modes
While we can rigorously count the number of floppy modes remaining in any bond network we cannot uniquely identify the particles associated with them. (A problem similar to uniquely identifying degenerate vibrational modes.)
De Souza and Harrowell PNAS 106, 15136, (2009)
The pentagonal ring has two internal floppy modes
We could nominate these two modes but the choice is not unique.
Unconstrained Motion vs Floppy Modes
A unique assignment can be made to each unconstrained motion. Unlike floppy modes, unconstrained motions are not necessarily independent. This is not a problem if what we want is a map of the possible individual motions.
De Souza and Harrowell PNAS, (2009)
Particles in an unconstrained motion are those which become rigid by the addition of a bond across a pivot.
The ratio of the number of unconstrained motions to floppy motions
Thermal motion of rigid clusters linked by pivots
Motion consists of the translation and rotation of free clusters and the coupled rotation of clusters joined by flexible pivots.
Consider some rigid clusters linked by floppy pivot points
Thermal motion of rigid clusters linked by pivotsMotion consists of the translation and rotation of free clusters and the coupled rotation of clusters joined by flexible pivots.
Rigid clusters constrained by a single pivot can still rotate independently
Thermal motion of rigid clusters linked by pivotsMotion consists of the translation and rotation of free clusters and the coupled rotation of clusters joined by flexible pivots.
Rotation of rigid clusters that are constrained by 2 or more pivots requires the mutual rotation of all the connected clusters
similar to random gear model Zwanzig JCP 1987
Thermal motion of rigid clusters linked by pivotsMotion consists of the translation and rotation of free clusters and the coupled rotation of clusters joined by flexible pivots.
Rotation of rigid clusters that are constrained by 2 or more pivots requires the mutual rotation of all the connected clusters
similar to random gear model Zwanzig JCP 1987
Relaxation rate ωi of particles in cluster i
ωi ~ (kBT/Ii)1/2
where Ii = total moment of inertia of the clusters coupled to the motion of cluster i
Idea: modes slow down as the size of the coupled cluster grows
Moment of inertia of rigid clusters resembles that of compact disks
Despite the random shapes of clusters
Ii ~ si2.05
similar to that expected for compact 2D object
si = number of particles in cluster i
ln(moment of inertia of cluster i)
Distribution of Frequencies of Unconstrained Motions
bond density increasing
rigidity percolation
The width of frequency distribution has a maximum at the rigidity percolation density
Spatial Distribution of the Time Scale of the Fastest Unconstrained Motion each Particle can Access
increasing bond density
rigidity percolation
How Sensitive is the Spatial Distribution of Relaxation Times to the Change of a Single Bond?
increasing bond density
rigidity percolation
Maps of the average variation in relaxation times due to random changes of a single bond
How Sensitive is the Spatial Distribution of Relaxation Times to the Change of a Single Bond?
increasing bond density
rigidity percolation
Maps of the average variation in relaxation times due to random changes of a single bond
While the variation is localised at high bond density, we find massive nonlocal sensitivity close to the rigidity percolation. This feature was not found in the Facilitated Kinetic Ising model along with the system size dependence of dynamic length scale
Structural relaxation of a Permanent Network
bond densities above percolation
bond density below percolation
at rigidity percolation
When the bond configuration is fixed, structure can only completely relax below the rigidity percolation
Bertheir 2011
Dynamic Heterogeneities: Maps and Measures
Non-Gaussian parameter
Molecular dynamics of binary mixtures in 2D
Dynamic Heterogeneities: Maps and Measures
Non-Gaussian parameter
Molecular dynamics of binary mixtures in 2D
Model
Particles diffuse via a diffusion coefficient that is, itself, undergoing a stochastic variation that obeys
To give
Comment on the Interpretation of Non-Gaussian Dynamics
Heterogeneous dynamics implies non-Gaussian dynamics - True
But non-Gaussian dynamics does not automatically imply heterogeneity
Trap-diffusion models
i.e. the transition from incremental continuous random walks to dynamics characterised by rare large jumps
will also generate non-Gaussian behaviour – even when homogeneously distributed in space.
Role of Collective Strain in Relaxation Dynamics: Irreversibility and Unrecoverable Strain
Structural relaxation typically involves particles moving a distance of ~ 0.3 x diameter - smaller than the distances typically involved in establish a diffusion coefficient.
These structural relaxation distances are small enough to overlap with collective vibrations and so we have to separate reversible from irreversible relaxation.
Role of Collective Strain in Relaxation Dynamics: Irreversibility and Unrecoverable Strain
Structural relaxation typically involves particles moving a distance of ~ 0.3 x diameter - smaller than the distances typically involved in establish a diffusion coefficient.
These structural relaxation distances are small enough to overlap with collective vibrations and so we have to separate reversible from irreversible relaxation.
Idea
a rearrangement re-sets the minimum of the potential so strain does not recover
Role of Collective Strain in Relaxation Dynamics: Irreversibility and Unrecoverable Strain
Structural relaxation typically involves particles moving a distance of ~ 0.3 x diameter - smaller than the distances typically involved in establish a diffusion coefficient.
These structural relaxation distances are small enough to overlap with collective vibrations and so we have to separate reversible from irreversible relaxation.
Idea
a rearrangement re-sets the minimum of the potential so strain does not recover
Note the particle movement was achieved as a vibration – it was ‘converted’ to a relaxation via the shift in the minima
The Role of Collective Strain in Structural Relaxation of a Supercooled Liquid
Filled circles are particles that relaxed via reorganization (i.e. changing nearest neighbours)
Open circles are particles that relaxed while losing no more than one neighbour (i.e. strains)
At low T, ~ 70% of structural relaxation is achieved by unrecovered strain – not rearrangement
So What Exactly, is Heterogeneous about Dynamic Heterogeneities?
Consider 2 nearest neighbour separating – we will call this a ‘bond break’
Let Pij be the probability that bond ij breaks in some time interval
and Fij be the probability that the bond ij is broken after some longer time
bond length
‘other’coordinates
threshold determined by geometry
Pij
Fij
Note that Fij can differ from Pij due to reversals
Pij F ij relaxation
Results: The Spatial Distribution of Pij and Fij
Dynamic heterogeneities are determined by the probability of reversals, not of the breaks themselves
bond breaking
What part of dynamic heterogeneity can be attributed to a configuration?
-15 -10 -5 0 5 10 15
-15
-10
-5
0
5
10
15
00.20.40.60.81.01.21.41.61.82.0
Three different runs from the same starting configuration but different momenta.
Defining the Propensity for Motion of a Configuration
Average squared displacements over many (>100) runs from a single initial configuration.
Persistent structure must be due to that configuration.
We call these ensemble averaged mean squared displacements the dynamic propensity.
ionconfiguratisoirr −>−< 2)()0(( ατ
Phys.Rev.Lett 93, 135701 (2004)
τα = 103 τ at T = 0.4
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Maps of the participation fractions for the 11 lowest frequency modes in an IS of the 2D binary disk mixture. Localised modes (participation ratio < 0.34) are coloured red
Heterogeneity and the Normal Modes of the Inherent Structures
Perry, Widmer-Cooper, Harrowell & Reichman, JCP 131, 194508 (2009)
localized
plane wave
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Participation fraction of the 30 lowest frequency modes of 6 different inherent structures of the 2D binary soft disk mixture
Mapping the Local Susceptibility of an Inherent Structure
Perry, Widmer-Cooper, Harrowell & Reichman, Nature Physics 4, 711 (2008)
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The low frequency mode participation overlaid by those particles whose probability for irreversible relaxation within 200τ exceeds 0.01
Perry, Widmer-Cooper, Harrowell & Reichman, Nature Physics 4, 711 (2008)
Irreversible Relaxation Occurs at Soft Localised Modes
Circles correspond to particles with a high probability of losing > 3 initial neighbours
And the Connection Between Structure and Dynamics?
The correlation between dynamics and the localized modes of the inherent structure suggests that degree of local constraint is more important than the specific geometries by which it was achieved.
But how does the inherent structure (a T = 0 structure) influence the dynamics at non-zero temperatures and for displacements well beyond the harmonic limit?
That remains an unanswered question.
Fluctuations and the Shear Modulus
][ 22 ><−><−= ∞ σσβVGGeq
The zero frequency shear modulus Geq can be written in terms of the fluctuations of the shear stress σ
Squire, Holt and Hoover, Physica 42, 388 (1969)
Fluctuations and the Shear Modulus
][ 22 ><−><−= ∞ σσβVGGeq
Born modulus- response to affine strain
reduction of modulus due to stress fluctuations. Associated with non-affine strains
The zero frequency shear modulus Geq can be written in terms of the fluctuations of the shear stress σ
Squire, Holt and Hoover, Physica 42, 388 (1969)
Note: G∞ not the same as the plateau modulus Gp , the experimental high frequency modulus.
Fluctuations and the Shear Modulus
][ 22 ><−><−= ∞ σσβVGGeq
Born modulus- response to affine strain
The zero frequency shear modulus Geq can be written in terms of the fluctuations of the shear stress σ
Squire, Holt and Hoover, Physica 42, 388 (1969)
When the averages are unconstrained <σ> = 0 and
><=∞2σβVG Zwanzig and Mountain, JCP. 43, 4464 (1965).
so that Geq = 0
reduction of modulus due to stress fluctuations. Associated with non-affine strains
On The Relation Between Rigidity and Constraint
It follows that the averages appearing in the expression for the modulus Geq must include some form of constraint, let’s imagine that it can be quantified by κ, where constraint increases with κ.
][ 22 ><−><−= ∞ σσβVGGeq κ κ
Then
1/κ
Geq
0
G∞
a non-trivial relation must relate the shear modulus to the degree of constraint
We shall use finite time trajectories as a means of applying an implicitconstraint.Monte Carlo averaging with explicit constraints is an alternative approach.
Two Step Relaxation with Random Bond Changes
t t
below percolation at percolation above percolation
Green line indicates the faction of particles in a percolating cluster
Relaxation in a single trajectory shows significant fluctuations close to rigidity transition due to the appearance and disappearance of percolating clusters