Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is...

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Appearance of crystals in microscope • Crystal shape – how well defined the crystal shape is – Euhedral – sharp edges, well- defined crystal shape – Anhedral – rounded edges, poorly defined shape – Subhedral – in between anhedral and euhedral • Cleavage – just as in hand samples! • Physical character – often note evidence of strain, breaking, etching on crystals – you will notice some crystals show those features better than others…

Transcript of Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is...

Page 1: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Appearance of crystals in microscope• Crystal shape – how well defined the crystal

shape is– Euhedral – sharp edges, well- defined crystal

shape– Anhedral – rounded edges, poorly defined shape– Subhedral – in between anhedral and euhedral

• Cleavage – just as in hand samples!• Physical character – often note evidence of

strain, breaking, etching on crystals – you will notice some crystals show those features better than others…

Page 2: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Cleavage

Most easily observed in PPL (upper polarizer out), but visible in XPL as well

• No cleavages: quartz, olivine• 1 good cleavage: micas• 2 good cleavages: pyroxenes, amphiboles

Page 3: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Cleavage

2 cleavages intersectingat ~90° pyroxene

60°120°

2 cleavages intersectingat 60°/120°: amphibole

Page 4: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Cleavage

random fractures, no cleavage:olivine

Page 5: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Twinning

Presence and style of twinning can be diagnostic

Twins are usually most obvious in XPL (upper polarizer in)

Page 6: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Twinning - some examples

Clinopyroxene (augite)

Plagioclase

• Simple twin on {100}

• Simple (Carlsbad) twin on (010)

• Pericline twin on (h01)

• Polysynthetic albite twins on (010)

Page 7: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Twinning and Extinction Angle

• Twinning is characteristic in thin section for several common minerals – especially feldspars

• The twins will go from light to dark over some angle

• This is characteristic of the composition

• Stage of the petrographic microscope is graduated in degrees with a vernier scale to measure the angle of extinction precisely

Page 8: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Extinction angle – parallel extinction

• All uniaxial minerals show parallel extinction• Orthorhombic minerals show parallel extinction

(this is because the crystal axes and indicatrix axes coincide)

PPL XPL

orthopyroxene

Page 9: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Extinction angle - inclined extinction

Monoclinic and triclinic minerals: indicatrix axes do not coincide with crystallographic axes

These minerals have inclined extinction (and extinction angle helps to identify

them)

clinopyroxene

extinction angle

Page 10: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Habit or form

blocky

acicular

bladed

prismatic

anhedral/irregular

elongate

rounded

fibrous

tabular

euhedral

Page 11: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Habit or form

blocky

acicular

bladed

prismatic

anhedral/irregular

elongate

rounded

fibrous

tabular

euhedral

Page 12: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.
Page 13: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Michel-Lévy Color Chart – Plate 4.11

Page 14: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.
Page 15: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.
Page 16: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.
Page 17: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.
Page 18: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

What interference color is this?What interference color is this?

Page 19: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

So far, all of this has been orthoscopicorthoscopic (the normal way)

All light rays are ~ parallel and vertical as they pass through the crystal

Orthoscopic viewing

Fig 7-11 Bloss, Optical Crystallography, MSA

• xl has particular interference color

= f(biref, t, orientation)

• Points of equal thickness will have

the same color

• isochromesisochromes = lines connecting

points of equal interference color

• At thinner spots and toward edges

will show a lower color

• Count isochromes (inward from

thin edge) to determine order

Page 20: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Time for some new tricks: the optical indicatrix

Thought experiment:Consider an isotropic mineral (e.g., garnet)

Imagine point source of light at garnet center;

turn light on for fixed amount of time, then map out distance traveled by light in that time

What geometric shape is defined by mapped light rays?

Page 21: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Isotropic indicatrix

Soccer ball(or an orange)

Light travels the same distance in all directions;n is same everywhere, thus = nhi-nlo = 0 = black

Page 22: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

anisotropic minerals - uniaxial indicatrix

quartz

calcite

c-axis

c-axis

Let’s perform the same thought experiment…

Page 23: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Uniaxial indicatrix

c-axisc-axis

Spaghetti squash = uniaxial (+)

tangerine = uniaxial (-)

quartz

calcite

Page 24: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Circular section is perpendicular to the stem (c-axis)

Uniaxial indicatrix

Page 25: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Uniaxial indicatrix(biaxial ellipsoid)

n

n a=X

c=Z

b=Y

n

a=X

c=Z

nb=Y

What can the indicatrix tell us about optical properties of individual grains?

Page 26: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

n - n = 0therefore, =0: grain stays black (same as the isotropic case)

n

n a=X

c=Z

b=Y

n

n

Propagate light along the c-axis, note what happens to it in plane of thin section

Page 27: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Grain changes color upon rotation. Grain will go black whenever indicatrix axis is E-W or N-S

n

n

This orientation will show the maximum of the mineral

n

n

n

n

n

n

n

n

n - n > 0therefore, > 0

N

S

W E

Now propagate light perpendicular to c-axis

Page 28: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Conoscopic ViewingConoscopic ViewingA condensing lencondensing lens below the stage and a

Bertrand lensBertrand lens above itArrangement essentially folds planes cone

Light rays are refracted by condensing lens & pass through crystal in different directions

Thus different properties

Only light in the center of field of view is vertical & like ortho

Interference FiguresInterference Figures Very useful for determining optical properties of xl

Fig 7-13 Bloss, Optical Crystallography, MSA

Page 29: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

How interference figures work (uniaxial example)How interference figures work (uniaxial example)

Bertrandlens

Sample(looking down OA)

sub-stagecondenser

W E-W polarizer

N-S polarizer

What do we see??What do we see??

n

n

n

n

nn

nn

© Jane Selverstone, University of New Mexico, 2003

Interference figure provides a zoomed ‘picture’ of the optic axes and the areas around that which have rays which are split and refracted – must be gathered in line with optic axis!!

Page 30: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Uniaxial Interference Uniaxial Interference FigureFigure

Fig. 7-14Fig. 7-14

O E

• Circles of isochromesisochromes

• Black cross (isogyresisogyres) results from

locus of extinction directions

• Center of cross (melatopemelatope)

represents optic axis

• Approx 30o inclination of OA will

put it at margin of field of view

Page 31: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Uniaxial FigureUniaxial Figure– CenteredCentered axis figure as 7-14: when rotate

stage cross does notnot rotate

– Off center:Off center: cross still E-W and N-S, but

melatopemelatope rotates around center

– Melatope outside field:Melatope outside field: bars sweep

through, but always N-S or E-W at center

– Flash Figure:Flash Figure: OA in plane of stage

Diffuse black fills field brief time as rotate

Fig. 7-14Fig. 7-14

Page 32: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Biaxial Minerals – Optic Axes• Biaxial Minerals have 2 optic axes

– Recall that biaxial minerals are of lower symmetry crystal classes (orthorhombic, monoclinic, and triclinic)

• The plane containing the 2 optic axes is the optic plane looking down either results in extinction in XPL-no retardation, birefringence

• The acute angle between the 2 different optic axes is the 2V angle how this angle relates to the velocities of refracted rays in the crystal determines the sign (+ or -)

Page 33: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

anisotropic minerals - biaxial indicatrix

clinopyroxenefeldspar

Now things get a lot more complicated…

Page 34: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Biaxial indicatrix(triaxial ellipsoid)

OA OA

2Vz

Y

X

Z

n

n

nn

n

n

n

n

n

n

n

The potato!

2Vz

There are 2 different ways to cut this and get a circle…

Page 35: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Alas, the potato (indicatrix) can have any orientation within a biaxial mineral…

c

a

b

Z

X

Y

Y

aZ

bX

colivine augite

Page 36: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

… but there are a few generalizations that we can make

The potato has 3 perpendicular principal axes of different length – thus, we need 3 different RIs to describe a biaxial mineral

X direction = n (lowest)

Y direction = n (intermed; radius of circ. section)

Z direction = n (highest)

• Orthorhombic: axes of indicatrix coincide w/ xtl axes• Monoclinic: Y axis coincides w/ one xtl axis• Triclinic: none of the indicatrix axes coincide w/ xtl axes

Page 37: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

OA OA

2Vz

Y

X

Z

n

n

n

2V: a diagnostic property of biaxial minerals

• When 2V is acute about Z: (+)

• When 2V is acute about X: (-)

• When 2V=90°, sign is

indeterminate

• When 2V=0°, mineral is uniaxial

2V is measured using an interference figure… More in a few minutes

Page 38: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

How interference figures work (uniaxial example)

Bertrandlens

Sample(looking down OA)

substagecondensor

Converging lenses force light rays to follow different paths through the indicatrix

W E

N-S polarizerWhat do we see??

n

n

n

n

nn

nn

Effects of multiple cuts thru indicatrix

Page 39: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Biaxial interference figures

There are lots of types of biaxial figures… we’ll concentrate on only two

1. Optic axis figure - pick a grain that stays dark on rotation

Will see one curved isogyre

determine 2V from curvature of isogyre

90° 60° 40°

determine sign w/ gyps

(+) (-)

Page 40: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

2. Bxa figure (acute bisectrix) - obtained when you are looking straight down between the two O.A.s. Hard to find, but look for a grain with intermediate .

Biaxial interference figures

Use this figure to get sign and 2V:

(+) 2V=20° 2V=40° 2V=60°

OA OA

2Vz

Y

X

Z

n

n

n

Page 41: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Quick review:

Indicatrix gives us a way to relate optical phenomena to crystallographic orientation, and to explain differences between grains of the same mineral in thin section

OA OA

2Vz

Y

X

Z

n

n

n

hi

OA OA

2Vz

Y

X

Z

n

n

n

lo

Isotropic? Uniaxial? Biaxial? Sign? 2V?All of these help us to uniquely identify unknown minerals.

Page 42: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Review – techniques for identifying unknown minerals

Start in PPL:• Color/pleochroism• Relief• Cleavages• Habit

Then go to XPL:• Birefringence• Twinning• Extinction angleAnd Confocal lense:• Uniaxial or biaxial?• 2V if biaxial• Positive or negative?

Page 43: Appearance of crystals in microscope Crystal shape – how well defined the crystal shape is –Euhedral – sharp edges, well- defined crystal shape –Anhedral.

Go to your book…

• Chemical formula• Symmetry• Uniaxial or biaxial, (+) or (-)• RIs: lengths of indicatrix axes• Birefringence () = N-n• 2V if biaxial

Diagrams:* Crystallographic axes* Indicatrix axes* Optic axes* Cleavages* Extinction angles