Apoptosis Lecture
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Transcript of Apoptosis Lecture
APOPTOSIS• Formed by Greek prefix apo- (from) and root ptosis (falling)• “leaves falling from a tree……”• the differentiation of fingers and toes in a developing human
embryo occurs because cells between the fingers apoptose; the result is that the digits are separate.
• Between 50 and 70 billion cells die each day due to apoptosis in the average human adult
• For an average child between the ages of 8 and 14, approximately 20 billion to 30 billion cells die a day
• Cells are born, live for a given period of time and then die-• Physiological cell death• Cell suicide• Cell deletion• Programmed cell death
AN APOPTOTIC CELL IN CULTURE
Collins JA, et al. 1997
THE APOPTOTIC PATHWAY
Triggers Modulators Effectors Substrates DEATH
. FADD
. TRADD
. FLIP
. Bcl-2 family
. Cytochrome c
. p53
. Mdm2
. Caspases . Many cellular proteins. DNA
. Growth factor Deprivation. Hypoxia. Loss of adhesion. Death receptors . Radiation . Chemotherapy
ApoptosisApoptosis is a cell death process which occurs during development and aging of animals.
Death by injuryThe cells swell and cell contents leak out, leading to inflammation of surrounding tissues
Death by suicideThe process is often called programmed cell death or PCD.
German scientist Carl Vogt was first to describe the principle of apoptosis in 1842.
In 1885, anatomist Walther Flemming delivered a more precise description of the process of programmed cell death.
The 2002 Nobel Prize in Medicine was awarded to Sydney Brenner, Horvitz and John E.
Sulston for their work regarding apoptosis
Etiology of cell death
Necrosis:• The sum of the morphologic changes that follow cell death in a living
tissue or organ
Apoptosis:• A physiological process that includes specific suicide signals leading
to cell death
Forms of cell death
"Classic"Necrosis Apoptosis Mitotic catastrophe
Passive Active Passive
Pathological Physiological or Pathological pathological
Swelling, lysis Condensation, Swelling, lysis cross-linking
Dissipates Phagocytosed Dissipates
Inflammation No inflammation Inflammation
Externally induced Internally or Internally induced externally induced
APOPTOSIS
In development, apoptosis removes unwanted cells; for example in separating the digits of the hand, culling excess neurons, eliminating inappropriately sensitive lymphocytes
In mature tissues that undergo renewal, e.g., blood cells, some epithelia, the outdated cells deliberately destroy themselves, if they canSome defensive cells die in the course of protecting the body, e.g. neutrophils, or in developing maximum affinity for attacking an invader, e.g. B lymphocytes
Apoptosis is used in running down unused or unwanted female reproductive tissue as it cycles, e.g., uterine endometrium, corpus luteum, breast gland epithelium
Most tumor cells grow; some become apoptotic
Infected cells may be removed by apoptosis
APOPTOSIS: Contexts II
In development, apoptosis removes unwanted cells, more examples: after matrix synthesis in the growth plate, in old bone awaiting resorption,
Apoptosis is part of running down unused or unwanted female reproductive tissue as it cycles, e.g., uterine endometrium, corpus luteum, breast secretory epithelium
In ovarian late atretic (degenerating) follicles, granulosa cells display hallmarks of apoptosis, e.g., fragmented nuclei, shrinkage, as they shed into the lumen
Some defensive cells die in the course of protecting the body: lymphocytes can kill each other, thus limiting immune reactions, & avoiding autoimmunity
APOPTOSIS: Contexts IIIIn these contexts, two kind of situation emerge: tidy coordinated loss (and sometimes replacement) of cells; and the messy battlefields of defense against infection, reaction to tumors, & wound repair
The macrophages go about their business of cell disposal very discreetly, without inflammation
This is not death with the headlights on and the traffic stopped; rather it is akin to the night-time anatomical grave-robbing of old, except that for apoptosis the body may be dismembered, but is not quite dead
APOPTOSIS: Contexts IV
Another context is all the other paths open to a cell, aside from apoptosis
Histology is first presented mostly as a described steady state - this is what the cells look like, and what they are doing as their normal function
However, the cells have many options, and are held by numerous controlling systems in this ‘steady state’
The options open to a cell can be categorized as: keep going/holding steady; advance; or retreat; as depicted on the next figures
Programmed cell death is the last resort of retreat
[Programmed cell death is not quite synonymous with apoptosis, since the latter term is restricted by some biologists to programmed cell death dependent on caspase enzymes]
senescence
transdifferentiate
APOPTOSIS: Contexts VI - Cell options
keep working
fuse
hypertrophy
enlarge & divide
apoptosis
stress responses
de-differentiate
shrink
RETREAT OR ADVANCE
APOPTOSIS: Contexts VII
This integrated control requires a host of chemical agents and factors, and has to take into account the many circumstances in which a cell finds itself
Few of these factors that regulate apoptosis: p53, Bcl-2 family, cytochrome c, TNF-, Fas ligand & receptor, caspases, endonucleases
However, the cells have many options, and are held by many controlling systems in this ‘steady state’
These categories - keep going; advance; or retreat - are mutually exclusive, so that control systems have to be interlocked, with inhibition of contrary activities, while stimulating a particular sequence and path
apoptosis
stress responses
de-differentiate
shrink
Apoptosis displays features of the cell states that often precede it
RETREAT OR
Apoptosis often occurs because the less drastic state of retreat cannot be maintained
membrane blebbing & changes
mitochondrial leakage
organelle
reduction
cell
shrinkage
nuclear fragmentation
chromatin condensation
APOPTOSIS: Morphology
membrane blebbing & changes
mitochondrial leakage
organelle reduction
cell shrinkage
nuclear fragmentationchromatin condensation
APOPTOSIS: Morphological events
organelle reduction
APOPTOSIS: Morphological events
sounds a rather coy term, but is intended to indicate that the organelles change and become non-functional, in ways often short of fast, outright destruction; e.g.,
Chiu R et al. A caspase cleavage fragment of p115 induces fragmentation of the Golgi apparatus and apoptosis. J Cell Biol 2002;159:637-648
mitochondrial leakage
organelle reduction
cell shrinkage
membrane blebbing
membrane changes
nuclear fragmentationchromatin condensation
Minimum for cell death
The cell depends on the nucleus, so take this out of commission with enzymes for
Call in the macrophages with a surface marker
However, for orderliness, and to help the macrophages, other changes occur,
Wrapped - cell membrane integrity is kept
which convert the cell to wrapped, smaller, partially digested pieces
Bleb
Blebbing & Apoptotic bodies
The control retained over the cell membrane & cytoskeleton allows intact pieces of the cell to separate for recognition & phagocytosis by Ms
Apoptotic body
M M
Macrophage recognition of the apoptotic cell
Apoptotic body
M
M
membrane changes
Call in the macrophages with a surface marker
Plasma membrane changes:
Phosphatidylserine is exposed externally
Membrane proteins lose their normally asymmetric distribution across the membrane
membrane changes, e.g.
mitochondrial leakage
organelle reduction
cell shrinkage
nuclear fragmentationchromatin condensation
Time for some chemical agents
membrane blebbing
The cell depends on the nucleus, so take this out of commission with enzymes for
Call in the macrophages with a surface marker
However, for orderliness, and to help the macrophages, other changes occur,
Cytochrome c
ENDONUCLEASES
CD14, & ligands for macrophageCD44
CASPASE proteases
CASPASE cysteinyl-aspartate-specific proteinase
APOPTOSIS: Signaling & execution
Tumor Necrosis Factor-
Apoptosis events
Apoptotic signalsFas ligand
Initiator caspases
Execution caspases
Cytochrome c
Apoptosis vs. Necrosis
• Necrosis– Swelling of cell– Disassembly of organelles– Membrane integrity
compromised– Release of cell contents– Often lead to inflammatory
response• Apoptosis
– Shrinkage of cell– Preservation of membrane
integrity– Chromatin condensation– Phagocytosed by other cells– No inflammatory response
Apoptosis and Programmed Cell Death (PCD)
• These two term are usually used interchangeably
• Apoptosis emphasizes more about the morphology (to be mentioned below)
• PCD emphasizes more about the orchestrated nature
• PCD is a broader term than apoptosis (PCD in plant, autophagic cell death, etc.)
So what is apoptosis?
• Regulated cell death
• Intrinsic mechanism
• Unique cell morphology
• Crucial in development and diseases
Morphology of Apoptosis
• Cell shrinkage (blebbing)
• Dark Nucleus (due to disintegration of chromatin)
• Apoptotic body
Morphology of Apoptosis
• Cell shrinkage (blebbing)
• Dark Nucleus (due to disintegration of chromatin)
• Apoptotic body
Morphology of Apoptosis
• Cell shrinkage (blebbing)
• Dark Nucleus (due to disintegration of chromatin)
• Apoptotic body
Morphology of Apoptosis
• Cell shrinkage (blebbing)
• Dark Nucleus (due to disintegration of chromatin)
• Apoptotic body
How Apoptosis was Discovered?
• First discovered in 1970’s during research of Caenorhabditis elegans development
• The discoverer, Dr. Horvitz, won 2002 Nobel Prize in Physiology or Medicine
• Has since been found in many higher animals (including human, of course).
Caenorhabditis elegans
• A nematode (app. 1mm long)
• A model animal in molecular and development biology research
• Genome determined
A perfect model for development biology
• Short life cycle (3 weeks)
• Existence of both allogamy and autogamy.
• Whole development is determined to the single cell level– Every C. elegans has exactly 1090 somatic cells– Each cell’s fate is invariant in all individuals
Apoptosis in C. elegans
• Of the 1090 cells C. elegans has, exactly 131 will undergo apoptosis, making the adult nematode has only 959 cells.
• Mutations affecting the death of these cells are identified. These mutants are viable
• ced-3 and ced-4 were first identified as pro-apoptotic genes (killer genes)
• ced-9 later was found to be anti-apoptotic genes
Not just in those worms!
• The gene product of ced-3 was found to be homologous to a mammalian protein ICE (later dubbed as caspase 1)
• Caspases were found in mammals, as well as other animals such as zebrafish and fruit fly
• Now apoptosis is generally believed to be a ubiquitous phenomenon among metazoa
Apoptosis in Development
• An efficient way to get rid of cells no longer needed
• Examples:– Digit development– Elongation of long bone– Amphibian metamorphosis
Apoptosis in Development
• Digit development• Elongation of long
bone• Amphibian
metamorphosis
Apoptosis in Development
• Digit development• Elongation of long
bone• Amphibian
metamorphosis
Apoptosis in Development
• Digit development• Elongation of long
bone• Amphibian
metamorphosis
STAGES OF CLASSIC APOPTOSIS
Healthy cell
DEATH SIGNAL (extrinsic or intrinsic)
Commitment to die (reversible)
EXECUTION (irreversible)
Dead cell (condensed, crosslinked)
ENGULFMENT (macrophages, neighboring cells)
DEGRADATION
STAGES OF CLASSIC APOPTOSIS
Genetically controlled: Caenorhabditis eleganssoil nematode (worm)
Healthy cell Dead cell Committed cell
ces2 ces1 ced9 ced3,4
BCL2 Caspases(proteases)
C. elegans genes == mammalian genes
Cells are balanced between life and death
DAMAGE Physiological death signals
DEATH SIGNAL
PROAPOPTOTICPROTEINS(dozens!)
ANTIAPOPTOTICPROTEINS(dozens!)
DEATH
APOPTOSIS: important in embryogenesis
Morphogenesis (eliminates excess cells):
Selection (eliminates non-functional cells):
APOPTOSIS: important in embryogenesis
Immunity (eliminates dangerous cells):
Self antigenrecognizing cell
Organ size (eliminates excess cells):
APOPTOSIS: important in adults
Tissue remodeling (eliminates cells no longer needed):
Virgin mammary gland Late pregnancy, lactation Involution(non-pregnant, non-lactating)
Apoptosis
Apoptosis
- Testosterone
Prostate gland
APOPTOSIS: important in adults
Tissue remodeling (eliminates cells no longer needed):
Resting lymphocytes + antigen (e.g. infection) - antigen (e.g. recovery)
Apoptosis
Steroid immunosuppressants: kill lymphocytes by apoptosis
Lymphocytes poised to die by apoptosis
APOPTOSIS: important in adults
Maintains organ size and function:
Apoptosis+ cell division
Cells lost by apoptosis are replaced by cell division
(remember limited replicative potential of normal cellsrestricts how many times this can occur before
tissue renewal declines)
X
APOPTOSIS: control
Receptor pathway (physiological):
Death receptors:(FAS, TNF-R, etc)
FAS ligand TNF
Deathdomains
Adaptor proteins
Pro-caspase 8 (inactive) Caspase 8 (active)
Pro-execution caspase (inactive)Execution caspase (active)
DeathMITOCHONDRIA
APOPTOSIS: control
Intrinsic pathway (damage):
Mitochondria
Cytochrome c release
Pro-caspase 9 cleavage
Pro-execution caspase (3) cleavage
Caspase (3) cleavage of cellular proteins,nuclease activation,
etc.
Death
BAXBAKBOKBCL-XsBADBIDB IKBIMNIP3BNIP3
BCL-2BCL-XLBCL-WMCL1BFL1DIVANR-13Several viral proteins
Apoptosis and Proliferation: Two faces of a coin
Diseases Related with Apoptosis
• Decreased rate of apoptosis let cells that usually die survive. Why is this bad?
• When cells have DNA damage beyond repair, they normally undergo apoptosis. If they somehow escape apoptosis (mostly related to p53 mutation), cancer might follow
• Some viruses can hijack the host transcriptional system to produce anti-apoptotic proteins to prevent their host from apoptosis
Diseases Related with Apoptosis
• Too much apoptosis causes atrophy
• For aging people, their neurons may undergo apoptosis, causing neurodegenerative diseases (Alzheimer's, Parkinson’s)
• Alcohol-induced liver diseases
• Myocyte degeneration
Caspases: Executioner of Apoptosis
• A family of Cysteine-aspartic-acid-proteinases (14 is known)
• With cysteine in active site• Cleave after aspartic acid• Normally in inactivated form (pro-enzyme)• Can be activated via cleavage after aspartic
acid (hint: self-activation)• Use positive feedback to form a cascade
Initiator and Effector Caspases
• Initiator caspases (2, 9, 8, 10): – Activated by intrinsic or extrinsic stimuli
– Cleave and activated effector caspases:
• Effector caspases (3, 6, 7): – Activated by initiator caspases
– Cleave and activate themselves and carry out caspase cascade
– Cleave many other proteins to fulfill the whole apoptosis phenomena
What lead to caspases?
• Two general pathways involved– Death-receptor– Mitochondrial
• Different initiator caspases are used
• Both pathways converge in caspase 3, the main effector caspase
Death-receptor Pathway
• Triggered by extrinsic ligand (“order of seppuku” ?)• A family of membrane receptors, generally called death-
receptors, regulates this pathway. e.g. TNF I, CD95• These receptors recruit procaspase-8 via an adaptor protein
(FADD)• Caspase-8 activation by proximity induction• Effector caspases…
Mitochondria Pathway
• Triggered by intrinsic signals, normally when the cell is damaged beyond repair
• Activation of some members of an important protein family (bcl-2 family)
• Mitochondria release cytochrome C• Formation of apoptosome (cytochrome C, Apaf-1, caspase-9)• Caspase-9 is activated
Early in apoptosis, mitochondria are triggered by multiple stimuli to release proteins that induce apoptosis. These include: oxidants, bax (a pro-apoptotic protein that targets mitochondrial membranes), Ca2+ overload, active caspases, and perhaps ceramide
The following caspase-activating proteins are then released from the intermembrane space:1. Cytochrome c (SMAC)2. AIF (apoptosis-inducing factor) OMNI3. And procaspases like procaspase-3 and caspase-2
Cytochrome c binds with Apaf-1, which then associates with procaspase- 9. This triggers caspase-9 activation. The complex of cytochrome c-Apaf- 1-caspase-9 then activates caspase-3 proteolytically.AIF also processes procaspase-3 to initiate caspase-3 activation.This cascade by caspases (cysteine proteases that cleave substrates at aspartic acid residues) culminates in apoptosis.
There are two general mechanisms:1. The outer mitochondrial membrane ruptures due to
expansion of the matrix space and organellar swelling.2. This releases cytochrome c, AIF, etc.How are cytochrome c and other caspase-activating pro
released from mitochondria?In this scenario, the mitochondrial inner membrane potential
drops, indicating the openings of channels known at permeability transition pores. These pores are composed of both inner and outer membrane proteins.
When the pores open, water and solutes enter the matrix, causing matrix swelling and outer membrane disruption.
2. The other mechanism also involves the opening of
channels. But, in contrast, these permeability transition
pores open only in the outer membrane and do not result in organellar swelling.
These transition pores allow cytochrome c and other
proteins to move from the intermembrance space into the
cytosol.
•Permeability of the membranes appear to be
enhanced by calcium, pro-oxidants, and several
apoptosis-related proteases (caspases)
•Bcl-2 and Bcl-2-like proteins increase resistance to
pore opening
Bcl-2 family• A protein family with its membranes related
tightly with apoptosis• At least 14 members• 3 Groups
Bcl-2 family
• Group 1 contains BH4 domain, usually anti-apoptotic
• Group 2 and 3 usually pro-apoptotic
• Yin and yang
• Cell survival/apoptosis depends on balance of these two anti and pro-apoptotic proteins
Possible Mechanism of Bcl-2 Family Protein Function
• The pro-apoptotic members of Bcl-2 family for a pore on mitochondrial membrane through which cytochrome C can be released
• They can also directly activate caspase via adaptor molecules
• They can modulate mitochondrial membrane to control the chemical and energy balance across the membrane
• The anti-apoptotic members bind to the pro-apoptotic members to form a heterodimer, so as to disrupt the aforementioned functions
Ways to detect Apoptosis
• Morphological evidence (mentioned above)
• Phosphatidylserine translocation
• Caspase activation
• DNA fragmentation
Phosphatidylserine Translocation
• Phosphatidylserine (PS) is a kind of phospholipid that constitutes the plasma membrane
• In normal cells, PS always resides in the cytosol side of the plasma membrane
• In apoptotic cells, PS quickly translocates to the exterior side of plasma membrane, which tags the apoptotic cells for engulfment by other cells (the “eat me” signal)
• The translocated PS can be detected by annexin-V binding
Phosphatidylserine Translocation (Detected by Flow Cytometry)
DNA Fragmentation
• In normal cells, DNA are wired around protein spindle called histones
• DNA and histones form units called nucleosomes
• In apoptotic cells, cleaved by DNase, nucleosomes are cut loose, like beads come off a string
DNA Fragmentation
• DNA of apoptotic cells subject to electrophoresis
• The DNA in nucleosomes cut loose have lower MW than intact DNA, thus move faster in electrophoresis
• Result in a “ladder” in the gel
CELL SURFACE DEATH RECEPTORS
Calbiochem, Inc
APOPTOTIC SIGNALING PATHWAYS
Fas
Procaspase 3
Caspase 8
Caspase 3
Bid
tBid
FADD
Procaspase 8
Bax/Bak
Procaspase 9
Caspase 9
Procaspase 3
Caspase 3
Cytochrome c
Growth Factor WithdrawalIrradiationLoss of Matrix ContactGlucocorticoids
?
Bcl-2Bcl-X
DNA Fragmentation
iCAD
CAD
Apaf-1
m
EXTRINSIC PATHWAY INTRINSIC PATHWAY
C-FLIP
IAP’sSmac
CASPASES
Caspase-1 (ICE)
Caspase-2 (ICH-1, Nedd-2)
Caspase-3 (CPP32, Apopain, Yama)
Caspase-4 (ICH-2, TX, ICEreıı)
Caspase-5 (ICErelııı, TY)
Caspase-6 (Mch2)
Caspase-7 (ICE-LAP3, Mch3, CMH-1)
Caspase-8 (FLICE, Mch5, MACH)
Caspace-9 (Mch6, ICE-LAP6)
Caspase-10 (Mch4)
SUBSTRATES for CASPASES
... PARP
... DNA-PK
... pRb
... Lamins
... NuMA
... Fodrin
... -Aktin
... Mdm2
... Cyclin A2
... Presenilin
... Others
WHERE can APOPTOSIS be WHERE can APOPTOSIS be ENCOUNTEREDENCOUNTERED ? ?
... Growth of Embrio
... Tissue Homeostasis
... Immunology
... Chronic viral diseases
... Neurodegenerative diseases
... Reperfusion injury
... Insuline-dependent Diabetes
... Atheroschlerosis
... Miyokard Infarction
... AIDS
... Development and Treatment of Malignancies
Significance of apoptosis in cancer1) Tumor induction• Apoptosis is an important regulator of
homeostasis--elimination of cells with damaged genome or growth in marginal (hypoxia)
• Apoptosis ensures the integrity of tissues
2) Viral transformation (adenoviral model) uses both proliferation stimulus (E1A) and anti-apoptotic (E1B) mechanisms.
3) Anti-neoplastic agents can cause an apoptotic tumor cell death
Moduators of Apoptosis--bcl-2 Family
• Bcl (B cell lymphoma)-2 cloned from chromosomal translocation
• Protect from death due to growth factor withdrawal
• functional homologue of ced-9
• Pro- and anti-apoptotic members
Bcl-2 Family
BH4 BH3 BH1 BH2 MA
Dimerization
Pore Formation
Bcl-2Bcl-xL
MABH4 BH1 BH2CED-9
BH3 BH1 BH2 MABax
BH3 MA
Anti-apoptosis
Pro-apoptosis
Bik
BH3BadBidEGL-1
Effectors of Apoptosis--Caspases
• Proteases synthesized as proenzyme (initiator vs effector)
• Cysteine in active site• Aspartate key to
recognition sequence (iCAD)
• ced-3 prototypical member
CASPASES
Pro(DD’s)
Large( 20 kd)
Small( 10 kd)
DX DX
Active Caspase
Caspase Substrates Category Substrate Caspase Effect Proposed Role in Apoptosis
Structural Nuclear Lamins 6 Degraded Disassembly of nuclear matrix
-Spectrin 3 Degraded Disassemble cytoskeletal-membranecontacts
FAK 7,6 Inactivated Disassemble focal adhesions
Gelsolin 3 Activated Disassemble actin filaments, blebbing,DNA cleavage
Actin 3,1 Degraded Disassemble actin filaments
-catenin 3 Degraded Disassemble cell-cell contacts
NuMA 3,4,6,7 Degraded Disassemble chromatin/matrix contacts
Vimentin 3 Degraded Disassemble intermediate filaments
Signaling MEKK1 3 Activated Activate SAPK
Stat1 ? Inactivated Inhibit IFN signaling
PKC , 3 Activated Nuclear condensation/fragmentation
D4-GDI 1,3 Inactivated Deregulate Rho GTPase
Akt-1 ? Inactivated Inhibit survival pathway
NF-B p50, 65 3 Inactivated Inhibit survival gene induction
Cell cycle DNA replicationcomplex C
3 Inactivated Inhibit DNA replication
mdm2 3 Altered Inhibit p53
Rb 3 Inactivated Release E2F-1
DNA repair PARP 3 Inactivated DNA nicks not recognized
DNA-PK 3 Inactivated Inhibit repair of strand breaks
Other IL-1 1 Activated Inflammation
IL-16 3 Activated Inflammation
IL-18 1 Activated Inflammation, induce IFN-
ICAD/DFF-45 3 Inactivated Allow translocation of CAD intonucleus, DNA fragmentation
Bcl-2, Bcl-XL 3 Altered Functions like BAX
Bid 8 Activated Translocates to mitochondria
Nedd4 1,3,6,7 Regulate ubiquitination
Inhibitors of Apoptosis--IAP’s
• Bind procaspases to prevent activation– initial description of bacculovirus product (p35)– contain metal-binding (~80aa) BIR repeats– number and sequence of BIR’s determine specificity of procaspase inhibition– many contain RING fingers
• Survivin– expressed in many fetal tissues– expressed in many colon cancers
• IAP modulators– inhibitors of inhibitors– Smac/Diablo
Pathways of Apoptosis--Mitochondria
• Cytochrome c released
• Cytochrome c binds Apaf-1 (ced-4 homologue)
• Apaf-1/cytochrome c complex binds caspase 9 (ced-3 homologue) and causes autoactivation
DEATH
CASPASE 3OTHERS
MITOCHONDRIA
CASPASE 9
TNF Receptor Family Signaling
Fas
TNFR1 TNFR2
TRADD
Procaspase 3
Caspase 8
Caspase 3
TRAF2
FADD
Procaspase 8 TRAF1
NFkB Activation andGene Induction (eg. SOD, IAP’s)
Pro-Apoptotic
Anti-Apoptotic
Anoikis--Death by loss of matrix contact
Adhesion--ILK, FAK, Shc
PI-3K
AktBad, Bim, ProC9
ApotosisGSK-3
CyclinD1
G1S
IGF-1
Rb-E2F
PTEN
Based on Yu, et.al. Mol. Cell. Biol.21:3325.
p53-Mediated Apoptosis
H2N COOH
TA PP DB T CTD
TA Transactivation domain recruits proteins involved in transcription--eg TATA box binding proteins and associated factors--also binding site for oncogene Mdm2 which targets p53 for ubiquitination (p19ARF inhibits)
PP Polyproline domain critical for the induction of apoptosis and transcriptional repression, but not activation
DB Sequence-specific DNA binding domain region of most mutations in tumors
T Tetramerization domain important for oligomerization and DNA binding
CTD COOH-termainal domain that is a negative regulator of the transactivating domain
Cell cycle and apoptosis
• p53 bax and bcl-2• overexpression of
E2F1 causes apoptosis
• p21 binds caspase 3 and is a substrate for caspase 3
M
G1
G0
S
G2
Rb
Rb
E2F1
E2F1
Cyclin D
Cyclin Ecdk4/6
cdk2Cyclin A
cdk2
Cyclin A
cdc2
Cyclin B
cdc2
PP
PP
p21
p27
p15
p16
p53 TGF
p53
bax
Adapted from Lundberg and Weinberg Eur. J. Cancer 35:531
R
E2F1
Inactive
Anti-neoplastic drugs and apoptosis
• Caspase 9 or Apaf-1 deficient cells are resistant to many forms of anti-neoplastic therapy (irradiation, etoposide, doxorubicin, cis-platin)
– These agents work primarily through p53, but there are poorly understood p53-independent pathways as well
– Silencing mutations in p53 are one mechanism of drug resistance– p53 also appears to be the target of numerous oncogenes (E1A, c-myc)
and p53 loss replaces E1B function in adenoviral transformation• 5’-Fluoruracil appears to work through the Fas pathway in some tumors
– p53 and reactive oxygen can induce FasL and Fas expression– Fas pathway is minor in most tumors, but neuroblastomas have silenced
the caspase 8 gene– FADD or caspase 8 deficient fibroblasts are resistant to FasL and TNF,
but sensitive to doxorubicin and etoposide• Akt pathway is important in tumor survival
– PTEN inactivation is correlated with poor prognosis in a number of tumor types
Induction of apoptosis in tumors by cytolytic immune effectors
• Immune cells can attack tumors through the extrinsic pathway
– TNF– FasL
• The granule-exocytosis pathway is more important in tumor control
– CD8 effectors– Natural Killer (NK) Cells– Granzymes
• Serine proteases stored in intracellular granules
• Granzyme B is an aspase (not a caspase) that can bypass initiator caspases to activate effector caspases or their substrates (eg. iCAD)
• Other granzymes with different specificities--substrates unknown
• Entry into target cells requires perforin
APOPTOTIC SIGNALING PATHWAYS
Fas
Procaspase 3
Caspase 8
Caspase 3
Bid
tBid
FADD
Procaspase 8
Bax/Bak
Procaspase 9
Caspase 9
Procaspase 3
Caspase 3
Cytochrome c
Growth Factor WithdrawalIrradiationLoss of Matrix ContactGlucocorticoids
?
Bcl-2Bcl-X
DNA Fragmentation
iCAD
CAD
Apaf-1
m
EXTRINSIC PATHWAY INTRINSIC PATHWAY
Granzyme B
APOPTOSIS: control
Physiological Intrinsicreceptor pathway damage pathway
MITOCHONDRIAL SIGNALS
Caspase cleavage cascade
Orderly cleavage of proteins and DNA
CROSSLINKING OF CELL CORPSES; ENGULFMENT(no inflammation)
APOPTOSIS: Role in Disease
TOO MUCH: Tissue atrophy
TOO LITTLE: Hyperplasia
NeurodegenerationThin skin
etc
CancerAthersclerosis
etc
APOPTOSIS: Role in DiseaseNeurodegeneration
Neurons are post-mitotic (cannot replace themselves;neuronal stem cell replacement is inefficient)
Neuronal death caused by loss of proper connections,loss of proper growth factors (e.g. NGF), and/or
damage (especially oxidative damage)
Neuronal dysfunction or damage results in loss of synapses or loss of cell bodies
(synaptosis, can be reversible; apopsosis, irreversible)
PARKINSON'S DISEASEALZHEIMER'S DISEASE
HUNTINGTON'S DISEASE etc.
APOPTOSIS: Role in DiseaseCancer
Apoptosis eliminates damaged cells(damage => mutations => cancer
Tumor suppressor p53 controls senescenceand apoptosis responses to damage
Most cancer cells are defective in apoptotic response(damaged, mutant cells survive)
High levels of anti-apoptotic proteinsor
Low levels of pro-apoptotic proteins===> CANCER
APOPTOSIS: Role in DiseaseAGING
Aging --> both too much and too little apoptosis(evidence for both)
Too much (accumulated oxidative damage?)---> tissue degeneration
Too little (defective sensors, signals?---> dysfunctional cells accumulatehyperplasia (precancerous lesions)
OPTIMAL FUNCTION (HEALTH)
APOPTOSIS
APOPTOSIS
AGING
Neurodegeneration, cancer, …..
Summary
• Apoptosis is a highly-regulated process that results in an efficient removal unwanted cells. It is greatly involved in development and prevention of oncogenesis
• Apoptosis is a complex process that involves interactions between many factors. The core components of apoptosis are the caspases
• Apoptosis is very important for homeostasis of the organism. Abnormal apoptotic rate may cause severe diseases