Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated...

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advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data
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Transcript of Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated...

Page 1: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

advancing the state of the art in microscopy

Imaging Protein Crystals and Managing the

Associated Data

Page 2: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

What Type of Microscope to Use?

Page 3: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

• What Type of Microscope to Use?

– Sample• Liquid Drop w/ Solid and/or Semi Solid

Page 4: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

• What Type of Microscope to Use?

– Sample• Liquid Drop w/ Solid and/or Semi Solid

– Sample Location• MicroBatch, Sitting Drop or Hanging Drop

Page 5: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Inverted Configuration

Light Source

Sitting DropOr

Microbatch Drop

Microscope

Page 6: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Upright Configuration

Microscope

Hanging Drop

Light Source

Page 7: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Upright Inverted

Sitting Drop Imaging Comparison

Page 8: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

• What Type of Microscope to Use?

– Sample• Liquid Drop w/ Solid and/or Semi Solid

– Sample Location• MicroBatch, Sitting Drop or Hanging Drop

– Illumination• Koehler

Page 9: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Properties of a Drop

- Lens Effect

Page 10: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Properties of a Drop

- Lens Effect

- Side Wall/Refraction Ring

Page 11: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Less than 90º

Contact Angle of a Drop

Page 12: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Contact Angle of a Drop

Hemispherical

Page 13: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Contact Angle of a Drop

Greater than 90º

Page 14: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

High Contrast = More Detail

Page 15: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Crystals at the Drop Edge - use medium contrast

Page 16: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Very dark side-wall effect - use low contrast

Page 17: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Focusing on condensation

Page 18: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Focusing on condensation Focusing on Crystals

Page 19: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Focusing on condensation Focusing on Crystals

Lo

w C

on

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tH

igh

Co

ntr

ast

Page 20: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

L.I.M.S.

Laboratory Information Management System

Data Management

Page 21: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Barcodes

Page 22: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Crystallization Data

Experiment Details

Page 23: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 24: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Crystallization DataExperiment Details

Image Management

Scoring Images

Page 25: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 26: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 27: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 28: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 29: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Experiment Details

Image Management

Scoring Images

Reviewing Results and Trends

Crystallization Data

Page 30: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 31: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
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Page 33: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Experiment Details

Image Management

Scoring Images

Reviewing Results and Trends

Remote Viewing

Crystallization Data

Page 34: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 35: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
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Page 38: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
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Page 40: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Crystallization DataExperiment Details

Image Management

X-Ray Data

Page 41: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 42: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 43: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.

Experiment Details

Image Management

X-Ray Data

Printing Results

Crystallization Data

Page 44: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 45: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.
Page 46: Advancing the state of the art in microscopy Imaging Protein Crystals and Managing the Associated Data.