A Preliminary Population Genetics Analysis of Feral Goats from an Insular Environment Tomas Hrbek...
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A Preliminary Population Genetics Analysis of Feral Goats
from an Insular Environment
Tomas Hrbek
Yadira Ortiz
Capra aegagrus hircus
• Goats have played a key role throughout human history
• Most recent genetic and archeological evidence strongly supports the hypothesis that goats were domesticated in the Zagros Mountains and that domestication occurred 10,000 years before present
• Goat were possibly the first animals to be domesticated
Capra aegagrus hircus
• Subsequent to their domestication, goats have spread to other parts of Europe, Asia and Africa
• Goats arrived with European colonists to the Americas beginning in the 16th century
• In many places goats were purposely set loose to form feral populations
Feral Goat dilemma
• Feral goats have a tendency to heavily and negatively impact native vegetation
• They have caused the extinction of native vegetation
• They have caused the extinction of native animals
Feral Goat dilemma
• On the other hand, feral goats are often derived from European breeds which no longer exist in Europe
• Feral goats are also adapted to a new set of often extreme environmental conditions
• Feral goats in insular environments are also subject to genetic bottlenecks and inbreeding
Feral Goat dilemma
• Being an invasive species on one hand, and a reservoir of potentially useful genic variation that can be used for commercial stock improvement
Mona Island
• Mona Island is an uplifted carbonate plateau that lies halfway between Puerto Rico and Hispaniola
• Mona Island is made of Miocene to Pliocene shallow water carbonates and is fringed on its western and southern sides by Pleistocene reef terraces
• Mona Island is a stressful xeric environment
Mona Island Goats
• What is the neutral genetic diversity and adaptive genetic variation in feral Mona goats compared with unimproved and improve breeds in Europe and Africa?
• How does individual genetic diversity correlate between neutral and selected loci?
• What are the origins of the feral Mona goats?
Mona Island Goat characterization
• 41 individuals of goat genotyped for 19 microsatellite markers
• 7 markers are monomorphic
• Miminum number of alleles was 2
• Maximum number of alleles was 5 (locus CSMM66)
• Observed heterozygosity was 0.372
Comparisons
• There are a number of published studies investigating population genetic parameters in goats, and the relationships of goat breeds or land races
• These studies are mainly the result of the European Union funded Econogene project
Comparisons
• Luikart et al. (1999):
• 22 markers from 4 distinct populations
• Spanish Murciana-Grenadina population (32 individuals) is polymorphic at all 22 loci, and heterozygosity is 0.570
Comparisons
• Ouafi et al. (2002):
• 5 markers from 8 distinct populations from two localized breeds of Morocco and the Pyrenees, and cosmopolitan Alpine breeds
• All markers are polymorphic in the 6335 individuals analyzed and heterozygosity varied between 0.630 to 0.729
Comparisons
• Serrano et al. (2009):
• 10 markers from 20 subpopulations of the threatened Spanish Guadarrama goats
• All markers are polymorphic in the 6335 individuals analyzed and heterozygosity varied between 0.587 and 0.744
Conclusions
• In general Mona goats have very low heterozygosities and gene diversities
• Many loci area also monomorphic
• The Mona Island goats are highly inbred with respect to European and North African goat breeds