2014 09 24 - LOINC and RELMA For Diagnostic Imaging
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Transcript of 2014 09 24 - LOINC and RELMA For Diagnostic Imaging
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Daniel J. Vreeman, PT, DPT, MScAssociate Research Professor, Indiana University School of Medicine
Associate Director for Terminology Services, Regenstrief Institute, Inc
2014
LOINC and RELMA for Diagnostic Imaging
Canada Health Infoway, Standards Collaborative Working Group 10 for Diagnostic Imaging
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Overview
1. Welcome to LOINC
2. LOINC Radiology Model (How we name imaging studies)
3. Tools for implementers
4. Use Case Samples
5. Collaborations: RSNA, IHTSDO (if needed)
photo via Vernio77
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photo via jamescridland
Welcome to the LOINC Community!
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LogicalObservationIdentifiersNames andCodes
A universal code system that facilitates exchange, pooling, and processing of clinical data.
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LOINC is like a bar code for test data
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34,000+ registered users in 163 countries
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photo via puuikibeach
WE DO MEASUREMENTS
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Laboratory LOINC
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Clinical LOINC
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If an observation is a question and the observation value is an answer
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LOINC provides codes for questionsWhere needed, other vocabularies provide codes for answers
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LOINC Diagnostic Imaging (Radiology)
photo via Karen Roe
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In diagnostic imaging, LOINC provides codes for: !
Ordered (and returned) imaging study
Sections within a report
Measurements or observations made
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Update to CCDA currently in revision at HL7
Diagnostic Imaging ReportStructure from:
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Document Level CodesAbdomen CT
Brain MRI W & WO Contrast IV
Orbit X-ray for foreign body
This is our bread and butter
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Radiology Report Terms
Modality # LOINC TermsCT 716
Mammography 145
MRI 854
Nuclear Medicine 455
Ultrasound 442
XR 1858
Fluoroscopy 646
> 5000 active terms
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Sections within a Report18785-6 Reason for study
55108-5 Clinical presentation
55111-9 Current imaging procedure descriptions
11329-0 History general
18782-3 Study observation (Findings)
55107-7 Addendum
55109-3 Complications
55114-3 Prior imaging procedure descriptions
55113-5 Key images
19005-8 Impressions
18834-2 Comparison study
18783-1 Recommendation
55115-0 Requested imaging studies information
55112-7 Document summary
55110-1 Conclusions
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Measurements / Observations38261-4 Hip DXA Bone density
38264-8 Hip DXA [T-score] Bone density
53626-8 CT Cerebral atrophic index
8294-1 Chest XR Diameter.anterior-posterior
In other domains, this is LOINCs main content
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Radiology Naming ModelFirst some general principles
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Multiple Levels of SpecificityViews
named, counted, no specification
Laterality
right, left, bilateral, unilateral, unspecified
Contrast
W, WO, W&WO, unspecified
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37842-2:View AP:Find:Pt:Shoulder:Doc:XR
37842-2 LOINC Code
View AP
Find
Pt
Shoulder
Doc
XR
Component
Property Measured
Timing
System
Scale
Method
There are six major LOINC axes
Anatomy of a LOINC Term
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NOT part of a LOINC NameReason for the test (disease it diagnoses)
Testing instrument
Specific details about the testing
Priority (e.g. STAT)
Where testing was done
Who did the test
Test interpretation
Anything not part of naming the test
Stuff carried in other parts of HL7 message
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Radiology Naming ModelRadiology-specific conventions
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Component Structure 1st Subpart - View
Views descriptor Views, Multisection, Views for leg length ,
# of views 3, greater than 3
Beam orientation AP, lateral
Body position Prone
[] [] []
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Component Structure 1st Subpart - Interventional
Timing/existence W, W&WO, 48H post
Substance given contrast, adenosine, Tc-99m Sestamibi
Route IV, PO
Guidance for
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Component Structure 2nd Subpart - Challenge/Precondition
Examples !
Guidance for biopsy:Find:Pt:Breast:Nar:Mam
Guidance for anesthetic block injection:Find:Pt:Celiac plexus:Nar:CT
Guidance for drainage:Find:Pt:Extremity:Nar:US
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System
The anatomic area being visualized
Not necessarily the anatomic area of interest
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Examples 24627-2 Chest CT
24590-2 Brain MRI
25011-8 Tibia and Fibula X-ray
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System Structure
Super System Patient is the default Used to indicate: blood product unit, bone marrow donor, fetus
11670-7:Blood ow.mean:Vel:Pt:Aortic arch^fetus:Qn:US.doppler
System^Super System
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Method Modality
Modality CT, MRI, XR
Submodality angio, fluor, SPECT
Side note: we handle ographies as synonyms. (e.g. arthrogram is linked to W contrast intraarticular
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Tools for Implementers
photo via Robert S Donovan
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RELMAREgenstrief LOINC Mapping Assistant
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RELMA Features
Browse LOINC content
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Map local terms to LOINC import/export translate local words to LOINC-speak manual/automated mapping
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Search Window
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Mapping Screen
navigate through your local term sethit enter to run a search
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Assigning a LOINC Map
Highlight the correct LOINC
Assign a map (or double click)
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search.loinc.orgonline LOINC browser
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search.loinc.org
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Use Case SamplesTaken from September 16, 2014 Terminology assessment example
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Modalities
Recommendation LOINC doesnt have discrete codes for modalities.
(They are the Method Part of a LOINC term).
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Hint Find codes with modality of ultrasound using method:US in searches
!Here is a code for a generic ultrasound study that doesnt specify any particular views or the exact body region
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Ultrasound
25061-3:Multisection:Find:Pt:XXX:Doc:US
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Other Pieces of LOINC namesLaterality
Part of the Anatomic specification. Shoulder.left
Hint: In RELMA you can exclude these.
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Contrast / Intervention
Anatomic Region / Body Parts
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Procedures
Recommendation Procedures are where LOINC shines. These are what the 5000+ radiology terms in LOINC are meant for.
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Hint Here is a code for a typical OB ultrasound study
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Obstetrical Ultrasound
11525-3:Multisection for pregnancy:Find:Pt:Pelvis+Fetus:Doc:US
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Reason for Exam
Recommendation Recall that LOINC provides codes for questions (observations/measurements). So, LOINC has a code that represents the question what is the reason for the exam:
!!The expected answers would be free text or drawn from another terminology like SNOMED CT. Often though, you dont need a LOINC code for this observation, because the information is sent in field OBR-31 Reason for Study. LOINC doesnt have a code that means confirm 20 week gestational age.
confirm 20 week gestational age
18785-6:Reason for study:Find:Pt:Report:Nar:Radiology
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Clinical Findings/Diagnosis
Recommendation
There are a few ways to get BPD. Heres a code for a direct measurement:
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Likewise for head circumference. Heres a measured one:
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But, LOINC does not have a code for the diagnosis microcephaly. (That would come from SNOMED CT).
US Bi-parietal Diameter, Head Circumference
11820-8:Diameter.biparietal:Len:Pt:Head^fetus:Qn:US.measured
11984-2:Perimeter:Len:Pt:Head^fetus:Qn:US.measured
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LOINC / RadLex Collaboration
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RadLex PlaybookA special component of RadLex
Developed by RSNA
Information model tailored for radiology orders and results, and connected to other terms in RadLex (e.g., anatomy, visual features).
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RadLex is made freely available for private, research, and commercial use internationally.
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http://loinc.org/collaboration/rsna/
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Overall Goal:Produce a single unified source of names and codes for radiology procedures with a cooperative governance process.
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Main DeliverablesDeveloping a Unified Model for Radiology Procedure Names
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Mapping the attribute-values between each terminology (i.e. LOINC Parts to RadLex RPIDs)
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Main DeliverablesDevising collaborative integrated governance process for new terms
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Creating single point-of-contact and governance structure for the unified terminology
!New joint LOINC/RadLex Committee to be advisory body (Approved at Clinical LOINC Meeting 02/2014)
!LOINC codes as the primary identifier for radiology procedures (e.g. the universal codes) while linking to the RadLex attribute/values for each term so that they can be used as meta-data
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LOINC / SNOMED Collaboration
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http://loinc.org/collaboration/ihtsdo
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Key PointsIts NOT a merger, take-over It IS a long term working relationship !
Endorsed statement: LOINC for questions, SNOMED for answers
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We want to avoid duplication LOINC Parts not a standalone terminology Not adding SNOMED CT Observables
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4 Main DeliverablesMapping LOINC Parts to SNOMED CT concepts
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Mapping existing SNOMED CT Observables to LOINC terms
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LOINC terms associated with post-coordinated expressions
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LOINC terms with categorical answer values linked to SNOMED CT answers
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How Well ProceedAgreement starts with these domain areas
Laboratory Including discrete orders and observations and panel names for orders (excluding panel structure)
Anthropomorphic measurements and evaluations
Vital signs and physiological measurements
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Agreement says we expect (but have not yet committed to) to expand into other observable domains (such as Radiology)