2010 Biomed Handbook

Faculty of ScienceBiomedical Science Handbook

2010

| 2010 Biomedical Science Handbook 2

Contents

Biomedical Science at The University of Auckland 3

Important dates 4

General Education 6

Changes to Regulations 8

Entry requirements 9

Admission and enrolment procedures 11

Biomedical Science 14

Courses 16

Year 1 courses 17

Year 2 courses 20

Year 3 suggested options 24

Course list 32

Postgraduate study in Biomedical Science 37

Programme contacts 38

Postgraduate courses 39

Advice and support for students 47

Academic honesty 48

The University of Auckland Library 51

Student Services 52

Improve your English langauge skills 56

Students support services 57

Campus maps 58

Disclaimer Although every reasonable effort is made to ensure accuracy, the information in this document is provided as a general guide only for students and is subject to alteration. All students enrolling at The University of Auckland must consult its official document, the current Calendar of The University of Auckland, to ensure that they are aware of and comply with all regulations, requirements and policies.

2010 Biomedical Science Handbook | 3

Biomedical ScienceBiomedical Science encompasses those disciplines relevant to an understanding of the scientific basis of health and disease in humans and animals. This research-led field has experienced rapid growth over the past decade and is associated with a high level of public awareness and approval.

The University of Auckland is acknowledged as a centre of excellence in this field reflecting the high quality of the biomedical research carried out in the Faculty of Medical and Health Sciences and the School of Biological Sciences.

Biomedical Science ProgrammesThe Biomedical Science programme is designed for very able students with an interest in emerging areas of biomedical science including genomics, microbiology, biochemistry, nutrition and cardio and neural science, and its application to improve human and animal health.

The Biomedical Science programmes are co-taught by the Faculties of Science and Medical and Health Sciences, with lectures split between the City and Grafton campuses.

The Honours programme is designed to equip a selected group of academically able students to progress efficiently into PhD training and is intended for people who aim to fill leadership roles in research and development.


Important dates

Students who are not selected for Honours may continue through the Postgraduate Diploma in Science (PGDipSci) (Biomedical Science) and Master of Science (MSc) to PhD as grades permit.

Graduates of the Biomedical Science programme will have an internationally accepted qualification, excellent research skills and the knowledge to work within some of the world’s most rapidly advancing scientific fields.

During the first three years, students enrol in courses towards a BSc-Biomedical Science which will deliver rigorous scientific training in a range of disciplines and provide a strong foundation for a number of professional careers. They will also give a unique insight into the principles underlying an important area of modern biological research.

Foundation teaching for Biomedical Science will be covered in the first two years of the programme.

Up to 60 students will be selected on academic merit for the BSc (Hons)-Biomedical Science degree at the end of the second year but will complete the third year towards the BSc-

Closing dates for applications for admission in 2010

1 December 2009 Deadline for new students to submit Application for Admission if 2010 programme includes Summer School courses.

8 December 2009 Deadline for new students to submit Application for Admission if 2010 programme includes Semester One and Semester Two courses only.

If you are a new student, only one Application for Admission is required. This form is due on either 1 December or 8 December depending on whether you want to take Summer School as well.

Applications received after these dates may be accepted if there are places available.

Biomedical Science and must maintain at least a B average. At the end of their third year, selected students should apply on nDeva for admission to the BSc(Hons)-Biomedical Science programme.

Students who are not selected for Honours may also complete the third year and graduate BSc-Biomedical Science. These students may continue through the Post Graduate Diploma in Science (PGDipSci) (Biomedical Science) and Master of Science (MSc) to PhD as grades permit.

Alternatively they may complete a BSc in Biological Science, Pharmacology or Physiology. A pathway to Doctorate is available to these students through the Master of Science, subject to meeting the academic requirements for entry.

Careers in Biomedical Science For Biomedical Science graduates and particularly those with the appropriate subsequent postgraduate training, there are a variety of opportunities in universities, research institutes and pharmaceutical/biotechnology industries. Private sector employment in the latter fields is particularly strong in the United States and Europe. Significant growth in this area is anticipated in New Zealand.


Academic year 2010Summer School – 2010Lectures begin Tuesday 5 January

Auckland Anniversary Day Monday 1 February

Deadline to withdraw from summer school courses 1 week before the end of lectures

Waitangi Day Saturday 6 February

Lectures end Friday 12 February

Study break/exams* Monday 15 February - Wednesday 17 February

Summer School ends Wednesday 17 February

Semester One – 2010Semester One begins Monday 1 March

Mid-semester break/Easter Friday 2 April - Saturday 17 April

ANZAC Day Sunday 25 April

Graduation Thursday 29 April - Friday 7 May

Deadline to withdraw from first semester courses 3 weeks before the end of lectures

Queen’s Birthday Monday 7 June

Lectures end Saturday 6 June

Study break/exams* Saturday 6 June - Monday 29 June

Semester One ends Monday 28 June

Inter-semester break Tuesday 29 June - Saturday 17 July

Semester Two – 2010Semester Two begins Monday 19 July

Mid-semester break Monday 30 August - Saturday 11 September

Graduation Tuesday 21 September - Thursday 23 September

Deadline to withdraw from second semester courses

3 weeks before the end of lectures

Lectures end Saturday 23 October

Study break/exams* Saturday 23 October - Monday 15 November

Labour Day Monday 25 October

Semester Two ends Monday 15 November

Hand in BSc(Hons)(BIOMED) Dissertation by 3pm Friday 12 November

Semester One – 2011Semester One begins Monday 28 February 2011

* Aegrotat and Compassionate Applications must be submitted within 1 week of the date that the examination affected took place.

Deadline for withdrawal from double semester courses is three weeks before the end of lectures in the second semester.


General Education

What is General Education?Courses in General Education are a distinctive feature of University of Auckland bachelors degrees. The General Education programme has been designed to produce graduates with flexibility, critical thinking skills, and an appreciation and understanding of fields outside of their usual area of study.

Who must take General Education? The requirement for General Education applies to students who enrol at The University of Auckland to begin their first undergraduate degree.

What must I take?BSc students must take two General Education courses (30 points) in their degree. Students taking a BSc specialisation in Biomedical Science wishing to apply to the MBChB after their first year must take one General Education course in Year 1. Students not applying for medicine may delay their General Education to another year.

How do I know what to take?Students will choose General Education courses from schedules which list courses available to their particular degree or conjoint combination. The schedules have been developed so that students will take General Education courses that allow them to explore areas of interest outside of their degree subjects. The schedules and courses available to BSc students taking a specialisation in Biomedical Science are:


What if the course is available as non-General Education as well?In some cases, courses are available both as part of the General Education Programme and as part of the portfolio of regular degree courses. If students are taking a dual purpose course as part of the General Education programme, they will enrol in the G version of the course (e.g. HISTORY 103G). The classes and programme of study will be the same for all students.

Where can I get more information?The General Education website, www.auckland.ac.nz/generaleducation enables students to view the courses available to them and provides the information needed for course selection.

Students are encouraged to seek advice on General Education in their degree from the Science Student Centre.

Schedule available to the Biomedical Science programme

Schedule A: Music, Art and Contemporary Issues

ANTHRO 106G LAW 121G

ARCHHTC 102G MUSIC 144G

DANCE 101G MUSIC 149G

DANCE 200G PLANNING 100G

FINEARTS 210G POPHLTH 104G

GEOG 103G THEOLOGY 101G

GEOG 104G

Schedule B: Humanities and Social Sciences

ANTHRO 104G EUROPEAN 100G

ANTHRO 105G FTVMS 110G

ARTHIST 110G FTVMS 215G

ASIAN 140G HISTORY 103G

CLASSICS 110G LINGUIST 101G

COMPLIT 100G MAORI 130G

DIABLTY 113G POLITICS 107G

EDUC 120G POLITICS 140G

EDUC 121G SOCIOL 101G

EDUC 122G SOCIOL 220G

ENGLISH 241G YOUTHWRK 152G

Schedule C: Business and Society

ACCTG 151G INTBUS 151G

COMLAW 151G MKTG 151G

ECON 151G

Schedule G: Communication

BUSINESS 151G PHIL 105G

ENGLISH 121G SCIGEN 101G

Schedule H: Languages

CHINESE 100G MAORI 101G

FRENCH 101G RUSSIAN 100G

GERMAN 101G SAMOAN 101G

ITALIAN 106G SPANISH 104G

JAPANESE 130G TONGAN 101G

KOREAN 110G

Note: BSc(Biomedical Science) students may not take STATS 101G to meet their General Education requirement.


Changes to regulations

Transition Regulations From 1 January 2011, arrangements put in place for all students who had commenced their programme prior to 2006 will no longer apply. Any transitional students who have not completed their programme by this time must complete under the 2010 regulations.

New web address for Transition Regulations Handbook: www.auckland.ac.nz/current students/Academic information/Academic programme changes 2006

Changes for 2010 From 1 January 2010 the Biomedical Science regulations will change to allow more flexibility for students. While students will no longer be required to meet the full requirements of an option to graduate, these sets of courses will be publicised through handbooks and The University

of Auckland website and should serve as a guide to students for matching their courses to their interests.

Note: From 2010, 45 points from BIOSCI 201-203 will be required. Students who commenced their programme in 2006-2009 may complete 30 points from this group.

Students who are following the options as specified in the 2006-2009 regulations will meet the requirements for graduation under 2010 regulations.

The new regulations which will govern completion are:

90 points: BIOSCI 101, 106, 107, CHEM 110, •PHYSICS 160, MEDSCI 142

60 points: BIOSCI 201-203, MEDSCI 205 •

At least 45 points: MEDSCI 201, 203, 204, •206, (BIOSCI 204 or MEDSCI 202), PSYCH 202

At least 15 points: STATS 101, 108, BIOSCI 209 •

At least 30 points: BIOSCI 347-358 •

At least 30 points: MEDSCI 301-315 •

At least 15 points at Stage III from BIOSCI, •MEDSCI, CHEM 390, 392 or PSYCH 305

At least a further 45 points from the schedule •for the Bachelor of Science

Students must also complete 30 points from •courses listed in the General Education Schedule approved for this degree.


Entry requirementsEntry Requirements for Part I of BSc-Biomedical Science

Entry to BSc-Biomedical Science is limited. Selection into this plan will require the University Entrance Standard and an NCEA rank score of at least 230, or a CIE score of at least 240, or equivalent. Students entering from NCEA will be considered according to their best 80 credits at Level 3 or higher over a maximum of five approved subjects weighted by the level of achievement attained in each set of credits. Students entering with alternative qualifications, such as IB will also be considered on their achievement.

Some courses within the Biomedical Science programme have limited entry (e.g. BIOSCI 107 and MEDSCI 142). All students will be considered for entry to these courses (NCEA students will be considered according to their best 80 credits at Level 3 or higher over a maximum of five approved subjects weighted by the level of achievement attained in each set of credits).

Students who do not meet the entry requirement for the BSc-Biomedical Science but who have gained University Entrance, and NCEA rank score of at least 150 or a CIE rank score of at least 140 will be eligible for entry to other majors within the BSc degree (e.g. Biological Sciences, Chemistry, Physiology, etc). Students with rank scores below these may be considered subject to space. Students can enroll in alternative first year courses to obtain higher grades and may apply for BSc-Biomedical Science in the following year. Students in this category who are intending to apply for medicine must do the Year 1 courses for BSc-Biomedical Science within one academic year and should therefore not begin the required courses until the following year even if admission to BSc-Biomedical Science is approved for second semester.

Year 13 Preparation For EntryStudents should take a range of science subjects at year 13 or NCEA Level 3, including biology, chemistry and physics. Subjects that enhance literacy are also encouraged, and students are strongly encouraged to include a humanities subject as well as mathematics.

Entry Into Medicine

Biomedical Science students who gain a B+ average in their first year of study may be eligible to be considered for an interview for entry to the undergraduate medical course. Students wishing to be considered for an interview need to take POPLHLTH 111 as their elective course and an approved General Education course in Year 1. They will also be required to sit the UMAT examination in July 2010.


There are no advantages in taking either the BHSc or BSc-Biomedical Science as a pathway into medicine. Students should choose their programme according to their ability, interest and preference.

Selection Criteria for Honours

Up to 60 students will be selected into Honours. Selection is based on calculated GPA over the Year 2 core courses: MEDSCI 205, 45 points: BIOSCI 201-203 and at least 45 points from MEDSCI 201, 203, 204, 206, (BIOSCI 204 or MEDSCI 202), PSYCH 202.

At the end of their third year, selected students should apply on nDeva for admission to the BSc(Hons)-Biomedical Science programme. To remain eligible for Honours, students must maintain a B average over their third year.

Some third year students may be considered if additional places are available.

Information sessions for students entering Honours will be held in Semester 2.

Useful Tips

When applying, you have up to four •programme choices per application. If BSc-Biomedical Science is your first choice, you should also apply for BSc in an alternative major (e.g. Biological Sciences, Chemistry , Physiology, etc) as your second choice in case you don’t meet the requirements for BSc-Biomedical Science. If you have University Entrance, and an NCEA rank score of at least150 or a CIE rank score of at least 140, you will be approved automatically into these alternative pathways, and can enroll in alternative first year courses to obtain higher grades that may allow entry to BSc-Biomedical Science in the following semester or year.

Once you have accepted your place in •BSc-Biomedical Science, you should enrol as soon as possible as places in some courses are also limited. Use Class Search on nDeva to

plan your timetable prior to enrolment. Certain streams have been reserved for BSc-Biomedical Science students only - this information is displayed in Class Search under Notes.

If you accept BSc-Biomedical Science and then •decide to accept an alternative programme or major, please contact the Science Student Centre (+ 64 9 373 7599 ext. 87020) so that we can discontinue the BSc or change the major for you.

Students who do not have a pass in senior •school Chemistry are advised to take CHEM 150 in first semester and then take CHEM 110 in second semester.

BSc & BSc(Hons)-Biomedical Science Programme

Core Courses: Year 1 & Year 2

90 points: BIOSCI 101, 106, 107, CHEM 110, •PHYSICS 160, MEDSCI 142

60 points: BIOSCI 201-203, MEDSCI 205•

At least 45 points: MEDSCI 201, 203, 204, •206, (BIOSCI 204 or MEDSCI 202), PSYCH 202

15 points: STATS 101, 108, BIOSCI 209 (may •be completed at any time)

Year 3

At least 30 points: BIOSCI 347 – 358 •

At least 30 points: MEDSCI 301 – 315 •

At least 15 points at Stage 3 from: BIOSCI, •MEDSCI, CHEM 390, 392 or PSYCH 305

At least a further 45 points from the schedule •for the Bachelor of Science


Admission and enrolment proceduresNew Students

If you are not enrolled at The University of Auckland in 2009, apply online at www.auckland.ac.nz/apply_now. If you are unable to access our website, please call 0800 61 62 63 or visit the Student Information Centre at 22 Princes Street, Auckland. This is open Monday to Friday from 8am – 6pm and Saturday 9am – 12noon during peak times.

Student Information Centre Room 112, Level 1 (Ground Floor) The ClockTower Building, 22 Princes Street Auckland City Campus

Phone: 64 9 373 7599 ext 88199 Fax: 64 9 367 7104 Email: [email protected]

The closing date for most undergraduate Science applications is 8 December 2009.

If you want to take courses at Summer School, or wish to apply to Sport and Exercise Science or the Bachelor of Optometry, applications close 1 December 2009.

Only one application is required.

Heading B


After submitting your application:

Your application will be acknowledged by post, and you will receive your Net ID, password and a list of items required to evaluate your eligibility to be admitted to the University and to your chosen programme/s. If you are submitting a hard copy application form, you are required to include relevant documentation at the time of submission. When all documentation requirements have been met, your application will be assessed by the Admissions Office and relevant faculties. If your application is approved, you will receive an offer of place.

Your Net ID and password allow you to access the University’s nDeva site, enabling you to monitor the progress of your application and check if further documentation is required.

Once you have accepted an offer of place, you will gain access to the Enrolment module on nDeva and you can then proceed to enrol in courses online. Postgraduate students may need to contact their department for enrolment to be completed.

Returning Students

If you are currently enrolled at The University of Auckland in 2009, and would like to change your existing programme (for example MSc after completion of BSc(Hons)), you should apply on nDeva (www.auckland.ac.nz/nDeva) by logging on and clicking on Add/Change programme.

You will be able to enrol via nDeva, but if you would like help, please call 0800 61 62 63 or visit the Student Information Centre or the Faculty of Science Student Centre (Ground Floor, Building 301, 23 Symonds Street). Postgraduate students may need to contact their department for enrolment to be completed.

The University of Auckland will be open for enrolment from November 2009 to the end of February 2010. You are welcome to visit during normal office hours to seek academic or enrolment advice or assistance in completing your enrolment.


Undergraduate Enrolment - where to from here?

EnquireVisit www.auckland.ac.nz or contact our student advisers for any information you need. Phone: 0800 61 62 63 | Email: [email protected] Student Information Centre: Room 112, ClockTower, 22 Princes St, Auckland

Apply for a place in a programme(s)Do you have internet access, or can you come on to campus to our help labs?

YesLog on to www.auckland.ac.nz •

Click on Apply Now.•

Complete the online Application for a place in your programme(s) of choice.•

You will receive an acknowledgement letter asking you to provide specific certified •documents (and in some cases to complete other requirements*) before your application can be assessed. The letter will also tell you how to access the University’s nDeva system to complete the next steps.

NoPhone: 0800 61 62 63 (or +64 9 308 2386 if overseas)

Email: [email protected]

The ClockTower Call Centre will forward required information to you.

OfferYour application will be assessed and, if successful, an “Offer of a place in a programme” letter will be mailed to you. This normally happens from mid January.**

AcceptAccept or decline your offer of a place in a programme online. Remember – you still need to enrol in your courses!

Enrol in your choice of coursesFor help with choosing courses you can:

talk to staff for advice, and listen to talks on various programmes at Courses and •Careers day in late August 2009 and Course Advice Day in late January/February 2010

refer to www.science.auckland.ac.nz or to publications relating to your •programme, or to The University of Auckland Calendar. For programme publications call 0800 61 62 63. The Calendar is for sale in bookshops or can be accessed from www.auckland.ac.nz Click on “Current Students” then “University Calendar” in the Quick Links box

go online to check the timetable for your chosen courses•

for more information visit the Faculty of Science Student Centre, Ground Floor, •Building 301, 23 Symonds Street

or call 0800 61 62 63.•

Enrol in courses via the online nDeva system, using your login and password.

Pay your tuition fees.

* For some programmes, you may be required to submit supplementary information (eg, a portfolio of work, referee reports, an online form) or to attend an interview/audition. If you have not already done this, any outstanding requirements will be explained in the acknowledgement letter – ensure that you follow them up as quickly as possible.

** You can also check the status of your application online using your login and password (if you don’t know these, check the instructions on your acknowledgement letter). If you are not offered a place in the programme(s) of your choice, you will receive a letter outlining alternative options. Please follow the advice on the letter or get in touch with the ClockTower Call Centre. Your final offer of a place is dependent both on you gaining admission to the University (which for school leavers may be dependent on your final school results) and assessment by the faculty offering the programme.

You are now a University of Auckland student. Congratulations!


Biomedical ScienceThe first year of the programme provides foundation teaching. First year students will take five courses in biological science, chemistry and physics from the overlapping first year, in common with students enrolled in BHSc and other programmes. All students are strongly encouraged to include biological sciences, chemistry, physics or statistics as electives. Students who wish to apply for medicine must include POPLHLTH 111 as an elective.

All Biomedical Science students must complete a statistics course and 30 points from General Education courses before the end of their programme.

Compulsory for Year 1

90 points: BIOSCI 101, 106, 107, CHEM 110, •PHYSICS 160, MEDSCI 142.

15 points from an approved General Education •course.

Plus 15 points in an elective course•

Transferring to other courses after Year 1

Entry to Medicine

The two routes to selection for medicine from the end of first year are the Bachelor of Health Sciences (BHSc) and the Bachelor of Science in Biomedical Science (BSc). For 2010, Biomedical Science students who gain an average of B+ or better in their first year of study will be eligible for consideration to be interviewed for selection to medicine. Students wishing to apply for medicine must include POPLHLTH 111 as an elective, and complete a General Education course in year 1. They will also be required to sit the UMAT examination in July 2010.

Students should also plan their course with some consideration of the programme they would follow should they not be selected for MBChB.

In most cases, students who have completed the first year courses of the BSc-Biomedical Science may also, with minimal addition of other first year courses (either as an elective course or in their second year), gain access to the following programmes in science.

BOptom – Optometry• leads to registration as an optometrist, as well as offering opportunities to study vision science. (Students must apply to be selected for this programme).

BSc – Bioinformatics• offers computation and biology. Applications of computer modelling and analysis to biology. Fast growing field, especially in relation to gene technology and analysis

BSc – Biological Science • genetics / proteomics / ecology / gene technology / biotechnology / biochemistry / plant and animal studies / ecology / microbiology. Strong lead to marine studies and environmental programmes, in combination with other subjects.

BSc – Chemistry • skills in organic, inorganic, physical and analytical chemistry.

BSc – Food Science• structure, properties and composition. Includes nutriceuticals, functional foods and genetically modified foods. Preparing Scientists for the food industry.

BSc – Medicinal Chemistry • organic chemistry degree looking at drug design. Includes courses on industrial and ethical issues and a current emphasis on derivatives from natural substances.


BSc – Pharmacology • involves the study and description of the action of drugs and chemicals on cells, tissues and the whole body.

BSc – Physiology• offers broad training in scientific and technical skills that naturally feed into other disciplines. Physiology is an important subject and along with neurophysiology and neuroscience (which study the brain and nervous system) is one of the fastest growing areas in biology.

BSc – Psychology• a range of options from neuroscience and cognitive psychology to educational and clinical psychology.

BSc – Sport and Exercise Science• More than just sport: strong programmes in exercise and cardiac rehabilitation, as well as sport psychology, leisure studies and mobility. (Students must apply to be selected for this programme).

BTech – Biotechnology• developing the industrial application of the new biotechnologies, particularly in genetics and DNA technology, in conjunction with the Faculty of Engineering. Good links to companies active in the field.

BTech – Medical Physics and Imagining •Technology provides a strong background in physics and appropriate areas of Biomedical Science, and to supplement this with specialist research-led training in biophontonics, biomedical imaging and instrumentation.


Year 1 courses 17

Year 2 courses 20

Year 3 suggested options 24

Course list 32

Postgraduate study in Biomedical Science 37

Programme contacts 38

Postgraduate courses 39

Courses


Year 1 coursesBIOSCI 101 (15 points) Essential Biology: From Genomes to Organisms First semester An introduction to the structures and processes which are common to micro-organisms, animals and plants at the cellular, molecular and biochemical levels. Genetic principles and processes and an overview of evolution and evolutionary concepts are included. This course includes guest lectures given by graduate students in research fileds relevant to course content.

Coordinator: Ms Mandy Harper Email: [email protected] Assessment: In course 60% (theory 40%, practical 20%), Examination 40% Textbook: Biology, Campbell & Reese 2008 (Benjamin Cummings), 8th Ed. Laboratory: 6 Laboratories (6 x 3 hours)

Note: This course assumes a knowledge of Year 13 Biology and at least Year 12 Chemistry.

BIOSCI 106 (15 points) Foundations of Biochemistry Second Semester This course will consider biochemical reactions as essential elements of life processes. Material covered includes the molecular structure and actions of proteins, the synthesis and metabolism of carbohydrates and fats in the fed and starved states, and elements of enzymology, metabolism, nutrition, vitamin, antibiotic action, and hormonal control in health, physical performance and disease. Reference will be made to specific biomedical examples where appropriate. This is a limited entry course. Students are strongly advised to complete BIOSCI 101 and CHEM 110 before enrolling in BIOSCI 106. The enrolment process will involve selection based on a minimum level of academic achievement.

Coordinator: Mrs Libby Hitchings Email: [email protected] Assessment: In course 60% (Theory 40%, practical 20%), Examination 40% Textbook: Biochemistry (6th Edition). Campbell and Farrell. (Thomson) Laboratory: 6 Laboratories (6 x 3 hours)


BIOSCI 107 (15 points) Biology for Biomedical Science: Cellular Processes & Development First Semester The cellular and tissue level basis of mammalian form and function. Special emphasis on cell structure and processes including membrane transport, muscle types and function, blood and the immune response, and basic neurobiology. Selected topics in human and experimental embryology will also be covered. Practical component includes labs on cell histology, human embryology and muscle physiology. This is a limited-entry course that assumes knowledge of NCEA Level 3 Biology and at least Year 12 Chemistry.

Coordinator: Ms Mel Collings Email: [email protected] Assessment: In course 60% (Theory 40%, practical 20%), Examination 40% Textbooks: Biology, Campbell & Reece, 8th ed. (Benjamin Cummings) Principles of Anatomy & Physiology, Totora & Derrickson, 11th ed. (John Wiley & Sons) Laboratory: 6 Laboratories (6 x 3 hours)

CHEM 110 (15 points) Chemistry of the Living World First Semester/ Second Semester A foundation for understanding the chemistry of life is laid by exploring the diversity and reactivity of organic compounds. A systematic study of reactivity focuses on the site and mechanism of reaction including application of chemical kinetics. A quantitative study of proton transfer reactions features control of pH of fluids in both living systems and the environment.

Coordinator: Dr Judy Brittain Email: [email protected] Assessment: In course 50% (2 one-hour tests 30%; practical, including on-line modules, 20%), Examination 50% Textbook: McMurry/Simanek (6th edition) or McMurry (4th or 5th edition) “Fundamentals of Organic Chemistry”. Laboratory: 6 Laboratories (6 x 3 hours)

Notes:1. Students not intending to apply for entry to

Medical School at the end of Year 1 and who do not have a pass in Year 13 Chemistry are advised to take CHEM 150 prior to taking CHEM 110.

2. Students, other than those taking CHEM 150, should take this paper in first semester.

MEDSCI 142 (15 points) Biology for Biomedical Science: Organ Systems Second semester Introduction to human biology with particular emphasis on integrated organ function. The course will deal with: structures and processes associated with the function of the nervous, locomotor, cardiovascular, respiratory, digestive, renal, endocrine and reproductive systems. This is a limited entry course. The enrolment process will involve selection based on a minimum level of academic achievement.

Coordinators: Peter Riordan Email: [email protected] Assessment: In course 40% (theory 28%, in-lab 12%), Examination 60% Textbook: Tortora & Derrickson, Principles of Anatomy and Physiology (11th Edition) Laboratory: 6 Laboratories (6 x 2.5 hours)


PHYSICS 160 (15 points) Physics for the Life Sciences First semester / Second semester Designed for students intending to advance their studies in the life sciences. Students intending to enrol in this course should have taken physics and mathematics to at least Level 2 NCEA. Topics covered will be especially relevant to biological systems: mechanics, thermal physics, wave motion, sound, light, electricity, physiology and instrumentation.

Contact: Dr Frederique Vanholsbeeck Email: [email protected] Assessment: In course 40% (tests 15%, tutorials 5%, assignments 10%, labs 10%), examination 60% Textbook: Urone, Paul, College Physics, 2nd Edition (Brooks/Cole) Laboratory: 4 Laboratories (4x3 hours) Tutorials: 5 tutorials (5 x 2 hours)

Elective Should ideally be chosen from biological sciences, mathematics, statistics, physics, chemistry or other science courses.

If you intend to apply for medicine you must include POPLHLTH 111 as your elective, and complete an approved General Education course.

All Biomedical Science students must take 15 points from an approved statistics course (any statistics course, or BIOSCI 209).

This may be completed at any time during the programme.


Year 2 coursesIn the second year, Biomedical Science students will complete core courses in disciplines fundamental to biomedical science. These include anatomy, biochemistry, cellular and molecular biology, genetics, microbiology, pathology, pharmacology and physiology.

Course list

BIOSCI 201 (15 points) Cellular and Molecular Biology First semester The basic structure of biomolecules, the evolution and structure of cells and their organisation into tissues and organs are examined first. This is followed by a study of the nucleus, the regulation of gene expression, and DNA, RNA and protein synthesis. Further sections deal with the cell behaviour, development, cancer, and the basis of immunity.

Prerequisite: BIOSCI 101, and 30 points from BIOSCI 102-107, MEDSCI 142 and 15 points from CHEM 110, 120, 150. Coordinator: Dr Ken Scott Email: [email protected]

BIOSCI 202 (15 points) Genetics Second semester The basic principles of mutation, recombination and genetic mapping are established in this course. These principles are developed in a variety of prokaryotic and eukaryptic organisms. Laboratory work uses molecular, microbial and eukaryotic material to explore the key features of heredity.

Prerequisite: 30 points from Stage I Biological Sciences including BIOSCI 101 Coordinator: Associate Professor Brian Murray Email: [email protected]

All students may complete under the 2010 regulations if they so choose.

From 2010: Requirements for Year 2 students who commenced the BSc-Biomedical Science degree or any degree programme at The University of Auckland between 2006-2008:

30 points: BIOSCI 201 – 203•

15 points: MEDSCI 205 •

At least 45 points: MEDSCI 201, 203, 204, •206, (BIOSCI 204 or MEDSCI 202), PSYCH 202.

For students who commenced the BSc-Biomedical Science degree or any degree programme at The University of Auckland in or after 2009, or before 2006:

45 points: BIOSCI 201 – 203 •

MEDSCI 205 •

At least 45 point: MEDSCI 201, 203, 204, 206, •(BIOSCI 204 or MEDSCI 202), PSYCH 202


BIOSCI 203 (15 points) Biochemistry Second semester This course presents core areas of modern animal and plant biochemistry. Emphasis is on macromolecular (protein, enzyme and membrane) structure and function, central metabolism, including metabolic integration and control, and signal transduction in hormone action and vision. Plant biochemistry includes nitrogen fixation, photosynthesis and cell wall structure.

Prerequisite: BIOSCI 101, 106 and 15 points from either CHEM 110 or 120 Coordinator: Associate Professor Tom Brittain Email: [email protected]

BIOSCI 204 (15 points) Applied and Environmental Microbiology First Semester Functions and behaviour of micro-organisms (prokaryotes, eukaryotes, and viruses) as individuals and in communities. The fundamental role of micro-organisms in ecosystems. Application of microbial capabilities to biotechnology, food production, agriculture and industry. Methods for the isolation, culture, and study of micro-organisms.

Prerequisites: BIOSCI 101 and at least 15 points from BIOSCI 102, BIOSCI 106, BIOSCI 107. Coordinator: TBA Email: TBA

MEDSCI 201 (15 points) Human Structure and Function First Semester Presents the structure of biological systems with special reference to human biology, from the levels of histology through to gross anatomy. Specific examples of the correlation between structure and function will be considered. An introduction to current techniques for the visualisation of biological structure will be presented.

Prerequisite: BIOSCI 107 and HUMANBIO 142 or MEDSCI 142 Coordinator: Peter Riordan Email: [email protected]

MEDSCI 202 (15 points) Microbiology and Immunology First semester An introduction to the nature and roles of bacteria, viruses, fungi and parasites as the causative agents of human disease. The defence mechanisms of the body, the immune system including autoimmunity and allergy. Control of disease by antimicrobials. Sterilisation, disinfection, and sterile manufacturing practice.

Prerequisite: BIOSCI 107 and HUMANBIO 142 or MEDSCI 142 Coordinator: Associate Professor Geoff Krissansen Email: [email protected]

MEDSCI 203 (15 points) Mechanisms of Disease First semester Outlines the basic mechanisms, operating at the molecular, cellular and tissue levels, by which human disease develops. These include genetic factors, cell injury, inflammation, repair, circulatory disturbances, and neoplastic change. These mechanisms are illustrated by descriptions of the pathogenesis of specific diseases that are relevant to the New Zealand situation, or are the focus of current biomedical research.

Prerequisites: BIOSCI 107 and HUMANBIO 142 or MEDSCI 142 Restriction: PATHOL 251 Coordinator: Dr Graeme Finlay Email: [email protected]

MEDSCI 204 (15 points) Introduction to Pharmacology and Toxicology Second Semester A solid grounding in the principles underlying pharmacology and toxicology, including the nature of drug targets, their interaction and response (pharmacodynamics), the fate of drugs within the body (pharmacokinetics), toxicity classification and testing, poisons and antidotes, adverse drug reactions, selective toxicity, drug discovery and development. Selected drug


examples will be studied to illustrate key principles of clinical pharmacology.

Restriction: PHARMCOL 201 Coordinator: Dr Debbie Young Email: [email protected]

MEDSCI 205 (15 points) The Physiology of Human Organ Systems First semester An integrative approach is used to study fundamental physiological processes which enable the body to overcome the challenge of life. Drawing on examples of normal and abnormal function, the course examines the interaction of vital physiological processes, from cellular control mechanisms to multiple organ systems. Topics include: control of fluid and electrolytes, cardiovascular control, energy use, and the delivery of oxygen and metabolites.

Prerequisite: BIOSCI 107 and HUMANBIO 142 or MEDSCI 142 Restriction: PHYSIOL 210 Coordinator: Dr Marie Ward Email: [email protected]

MEDSCI 206 (15 points) Introduction to Neuroscience Second Semester The impact of neuroscience revolution on our understanding of human physiology and biomedical research is reviewed. Topics include: mechanisms of neurotransmission, learning, memory, sensory perception (vision, hearing, touch and smell) and application of gene therapy for treating neurological diseases. Special emphasis is placed on the integration and control of physiological function by the nervous system. Examples include control of movement and coordination, regulation of reproduction, blood pressure, breathing, appetite, body weight and sexuality. Developmental neuroscience is also considered. Laboratory exercises provide insight into neural structure and function and include application of neuroimaging technologies.

Prerequisite: BIOSCI 107 and HUMANBIO 142 or MEDSCI 142 Restriction: PHYSIOL 220 Coordinator: Dr Johanna Montgomery Email: [email protected]

PSYCH 202 (15 points) Biopsychology First semester Provides a basic introduction to the structure and function of the brain, neuropsychology, and genetic and hormonal influences on behaviour. This course includes a compulsory laboratory component.

Prerequisite: 30 points in Stage I Psychology or 15 points from BIOSCI 101, 103 Restriction: 461.230 Coordinator: Associate Professor Ian Kirk Email: [email protected]


Cancer Biology & Therapeutics

Cardiovascular Biology Cellular & Molecular Biomedicine

Genetics & Development

Recommended: Recommended: Recommended: Recommended:

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

MEDSCI 203

MEDSCI 204

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

MEDSCI 206

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

Desirable : Desirable : Desirable : Desirable :

MEDSCI 201 MEDSCI 203

MEDSCI 204

MEDSCI 206

MEDSCI 203

Microbiology & Immunology

Neurobiology Nutrition Reproduction, Growth & Metabolism

Recommended: Recommended: Recommended: Recommended:

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

[BIOSCI 204 or MEDSCI 202]

MEDSCI 203

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

MEDSCI 204

MEDSCI 206

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

MEDSCI 205

BIOSCI 201

BIOSCI 202

BIOSCI 203

Desirable : Desirable : Desirable : Desirable :

MEDSCI 201

or PSYCH 202

MEDSCI 203, 204, 206

(MEDSCI 202 or BIOSCI 204)

MEDSCI 201

MEDSCI 203

Note: All students must complete two General Education and one statistics courses at some time during Years 1, 2 or 3

Preparation for Year 3 OptionsIf you choose to follow the ‘Option’ structure for the third year, the Stage II courses listed below will ensure you have met all prerequisites for courses recommended for that option.

Note that if you vary your choices different prerequisites may be required.


Year 3 suggested optionsIn Year 3 students select from one of the following options:

Cancer Biology and Therapeutics

Cancer affects over a quarter of the world’s population and its control and cure provide considerable challenges for research. Progress over last four decades has resulted in an improved understanding of the disease and the formulation of novel strategies for prevention and cure. A number of groups in the University are involved in research projects in cancer, and the establishment of the Auckland Cancer Society Research Centre (ACSRC) in the Faculty of Medical and Health Science has now provided a strong focus for a multidisciplinary research programme. The international successes of the ACSRC include the development of five drugs from the design stage through to clinical trials in cancer patients. This background provides a number of opportunities for research projects with a high degree of relevance to human cancer.

Current research can be divided into three interlinking areas:

Research in cancer biology includes studies on •the genetics and cell biology of cancer growth, and studies of responses of cancer cells to

DNA damage and to inhibition of growth signalling pathways. Research includes both molecular and cellular approaches, and includes work on the properties of cancer cells grown from tissue donated by cancer patients.

Research on cancer causation includes studies •of mutagenesis by dietary and chemical carcinogens and the development of new strategies for preventing cancer, particularly those involving modulation of dietary components.

Research in cancer therapeutics includes the •design, synthesis and evaluation of new types of anticancer drugs. Emphasis is placed on drug pharmacokinetics since this has close connections with clinical trials of new anticancer drugs developed by the ACSRC. Further research areas include the delivery drugs to targets within the tumour, the activation of prodrugs within tumours, interactions between drugs and radiotherapy, and the tumour microenvironment. The latter includes studies on the role of both vascular and immune components in the action of new anticancer drugs.

For further information or advice contact: Dr Nuala Helsby School of Medical Sciences Phone: 373 7599 ext 89831 Email: [email protected]

Requirements for students who have been enrolled in the BSc-Biomedical Science degree or any degree programme at The University of Auckland prior to 2006:

at least 15 points from PATHOL 302, MEDSCI •302

at least 45 points from BIOSCI 351, 353, 354, •356-358, CHEM 390, 392, MEDSCI 303, 306, 314, PHARMCOL 301, 303, 305


at least 45 further points from courses listed in •the Bachelor of Science schedule. A total of 90 points above Stage II must be taken by students applying for Honours.

Recommended course of study for students who have been enrolled in the BSc-Biomedical Science degree or any degree programme at The University of Auckland after 2005:

MEDSCI 301-303•

At least 30 points from BIOSCI 351, 353, 354, •356, 358, CHEM 390, 392, MEDSCI 306, 314

At least 45 further points chosen from the •Bachelor of Science schedule. A total of 90 points above Stage II must be taken by students applying for Honours

Cardiovascular Biology

Imagine a single cardiac muscle cell contracting, which in combination with other cells forms the heart, whose rhythm and function is regulated by the central nervous system to give rise to, along with blood vessel tone, blood pressure, and you have an essence of the breadth of cardiovascular research covered within The University of Auckland. Cardiovascular disease kills 50% of the population and is a major area of health and research expenditure worldwide. The University of Auckland contains the largest and most respected grouping of cardiovascular researchers in New Zealand. Research undertaken is well funded and has an international reputation. Students choosing cardiovascular biology have an enormous range of research laboratories to choose from including molecular and cellular issues relating to cardiac muscle cells and blood vessels, to heart structure and function, to control of blood pressure and even human cardiovascular studies. Thus wherever your interests lie there is something for you. There is large demand for graduates in cardiovascular biology in such varied employment areas as; drug development, pharmaceutical sales, fundamental research, teaching, clinical research,

patent attorneys, biotechnology companies, hospitals.

For further information and advice contact: Associate Professor Laura Bennet School of Medical Sciences Phone: 373 7599 ext 84890 Email: [email protected]


at least 30 points from MEDSCI 308, 311, •PHYSIOL 301, 304

at least 15 points from MEDSCI 301, 305, 309, •310, PATHOL 301, PHARMCOL 304, PHYSIOL 302

at least 15 points from BIOSCI 350, 351, 353, •354



MEDSCI 308, 309, 311•

At least 30 points from MEDSCI 301, 305, 310, •BIOSCI 350, 351, 353, 354


Cellular and Molecular Biomedicine

The primary objective of biomedical research is to understand biological processes in normal and diseased tissues at the cellular and molecular


level. The Cellular and Molecular Biomedicine option offers students a chance to focus their study at a fundamental level and apply it to the widest possible range of biomedical research themes. The emphasis is on how basic studies in molecular and cellular biology contribute to the development of knowledge in a variety of biomedical fields. Students will gain first-hand experience in the application of state-of-the art technologies including genomics and proteomics, biomolecular structure analysis, cellular imaging and electrophysiology.

Research interests of affiliated staff cover gene structure and expression, molecular cell biology and the structure and function of biomolecules as applied to molecular neuroendocrinology, metabolic regulation, diabetes and insulin resistance, molecular virology, membrane transport, cellular physiology and drug development.

Fourth year studies for the Cellular and Molecular Biomedicine option could include courses that cover techniques in genomics, proteomics and bioinformatics, the application of transgenic methods to the biomedical industry, current themes in biomedical research, biomolecular structure and function or applications of recombinant DNA technology to biomedicine.

For further information contact: Dr Judy O’Brien School of Biological Sciences Phone: 373 7599 ext 88764 Email: [email protected]

Associate Professor Paul Donaldson Department of Optometry and Vision Science Phone: 373 7599 ext 84625 Email: [email protected]


at least 45 points from BIOSCI 350, 351, 353•

at least 15 points from MEDSCI 304, 308, •309, PHARMCOL 302, PHYSIOL 301, 302

at least 45 further points from courses listed in •the Bachelor of Science schedule. A total of 90 points above Stage II must be taken by students applying for Honours


BIOSCI 350, 351, 353•

At least 30 points from MEDSCI 301, 303-305, •308, 309


Genetics and Development

Developmental biology is concerned with how multicellular organisms and their complex structures such as different organs and tissues arise from a single cell. Much of the excitement in developmental biology today arises from our growing understanding of how genes direct these developmental processes.

This option will explore how cells interact to build organisms and how the structure of organisms is influenced by the genome. There is reason to believe that the extraordinary complexity of an adult organism is the product of a set of somewhat simpler programmes, set in place during development. Many of these genetic programmes are accessible to researchers through model systems that are less complex than humans. Basic regulatory and developmental pathways are remarkably conserved among diverse organisms (fruit fly, nematode worm, zebrafish, frogs, mice, humans).


The completion of the human genome sequence, together with the sequencing of the genomes of several other model organisms, has demonstrated the extraordinary similarities between the genomes of humans and those of simpler organisms. The sequences provide further evidence that the study of genetic pathways in these simpler organisms, where work can be done more rapidly, provides fundamental knowledge directly applicable to the study of human genetics and disease. Many computational tools that comprise the area of bioinformatics are used widely in development and genetics.

In summary, reference will be made to many model organisms in this option and you will learn how genes influence development by focussing on specific organs and tissues. We will also consider how problems in development underpin many diseases of the human body. Research in all areas of biomedicine require an appreciation of the temporal and spatial patterns of gene expression, and developmental programmes. It is these areas that are highlighted in the Genetics and Development option.

For further information or advice contact: Associate Professor Phil Crosier School of Medical Sciences Phone: 373 7599 ext 86279 Email: [email protected] Associate Professor Don Love School of Biological Sciences Phone: 373 7599 ext 87228 Email: [email protected]


45 points from BIOSCI 351, 354, 356•

at least 30 points from BIOSCI 350, 353, •MEDSCI 301

Microbiology and Immunology

The course of infectious disease in humans is determined by the replication and spread of microbial pathogens on the one hand and the ability of the host immune system to recognise and eliminate these invaders on the other. Outcomes of these competing processes are determined through the spectrum of molecular interactions made between the host and invading pathogen. Thus the Microbiology and Immunology option integrates two of the most active areas of biomedical research: the molecular microbiology of bacteria, viruses and microbial eukaryotes together with the nature and complexity of the immune response triggered by their infection of animal hosts. The overall



45 points from BIOSCI 351, 354, 356•

At least 30 points from BIOSCI 350, 353, •MEDSCI 301, 312



objective is to give students an insight into the interactions between pathogens and host at the molecular level and to provide a view of the human immune system as both an effective barrier to disease and the major driving force behind microbial evolution.

Course material will focus on major current themes in molecular microbiology with emphasis on signalling within microbial communities, analysis of microbial genomes, the structural biology of microbes and the molecular basis of microbial pathogenesis. A medical perspective is also included that addresses how bacteria perceive and respond to the host environment as well as the emergence of novel pathogenic microbes, the re-emergence of old ones and the problem of antibiotic resistance. From the immune system perspective this option will focus on the diversity and regulation of host processes that are active during various infections, the genes and proteins involved in innate and adaptive immunity, and how the immune system distinguishes self from non-self. Links between the immune and nervous systems and how these influence physiological and behavioural responses to infection are also covered.

Research groups are active in the Faculty of Medical and Health Sciences and the School of Biological Sciences, providing many exciting opportunities for postgraduate research projects in this area.

For more information contact option Coordinators;

Associate Professor Roger Booth School of Medical Sciences Phone: 373 7599 ext 86475 Email: [email protected]

Dr. John Taylor School of Biological Sciences Phone: 373 7599 ext 82854 Email: [email protected]


at least 45 points from BIOSCI 349, 352, 357, •MEDSCI 301, 314

at least 30 points from BIOSCI 350-353•


Recommended coures of study for students who have been enrolled in the BSc-Biomedical Science degree or any degree programme at The University of Auckland after 2005:

45 points from BIOSCI 349, 357, MEDSCI 301, •314

At least 30 points from BIOSCI 347, 348, •350-353

At least 45 further points chosen from the •Bachelor of Science schedule. A total of 90 points above Stage 2 must be taken by students applying for Honours


Neurobiology

Neurobiology is one of the fastest growing areas of modern biomedical science. Research in this field deals with structures and mechanisms that underlie the function of the brain and nervous system in health and disease. The approaches used are interdisciplinary and integrate knowledge from the level of the molecule to that of the most complex neural systems.

Neurobiology is an area in which The University of Auckland is particularly strong with numerous research groups acknowledged as world leaders in their fields. Multi-disciplinary teams in the School of Medical and Health Science are working on the development of the nervous system, the cellular basis of learning and behaviour, mechanisms of hearing and vision, control of breathing and circulation by the central nervous system, regulation of feeding behaviour and body weight; and the molecular and cellular basis of neuro degenerative brain disorders such as Alzheimer’s, Huntington’s and Parkinson’s disease and on stem cell repair in these disorders. These groups employ techniques ranging through molecular biology, biophysics, neuroanatomy, neurophysiology, gene therapy and a range of modern imaging methods. Functional brain imaging is being used to investigate aspects of cognition and behaviour in the Department of Psychology, while computer modelling and neurophysiology are being combined in the School of Biological Sciences to study the role of the cerebellum in the coordination and control of movement.

Biomedical Science students who are interested in specialising in this option should select MEDSCI 205 and 206 and may wish to include MEDSCI 201 and PSYCH 202.

For further information contact: Dr Johanna Montgomery Department of Physiology Phone: 373 7599 ext 89828 Email: [email protected]


at least 45 points from MEDSCI 307, 308, 310, •PHARMCOL 306, PHYSIOL 301, 303

at least 30 points from BIOSCI 350, 351, 353, •354, MEDSCI 309, PHYSIOL 302, PSYCH 305



45 points: MEDSCI 304, 307, 308, 310•

At least 30 points from BIOSCI 350, 351, 353, •354, MEDSCI 309, 312, PSYCH 305



utero and in early infancy. They subsequently affect morbidity, physical and mental capacity throughout life, and the development of diet-related disease. Although most effectively addressed during interuterine development, nutritional intervention throughout life may overcome these genetic and/or epigenetic-related susceptibilities. Studies in these areas are done through the Department of Pediatrics and also The Liggins Institute.

While human population monitoring or dietary intervention studies are done by several groups, the Human Nutrition Unit provides a well-maintained human metabolic unit that permits highly controlled clinical trials in a live-in situation.

For further information or advice contact: Professor Lynn Ferguson School of Medical Sciences Phone: 373 7599 ext. 86372 Email: [email protected]

Recommended course of study

45 points from BIOSCI 358, MEDSCI 312, 315•

At least 30 points from BIOSCI 348, 351, 353, •FOODSCI 301, MEDSCI 301, 306-308, 314

At least 45 further points from courses listed in •the Bachelor of Science schedule. A total of 90 points above Stage II must be taken by students applying for Honours.

Note: Students should note that FOODSCI 201 is a prerequisite for FOODSCI 301.

Reproduction, Growth and Metabolism

You may not have thought about it yet, but it is likely that you believe that when the time is right you will choose to have children and that they will be normal and healthy. This is everyone’s expectation. Unfortunately, for 1 in 6 couples infertility, miscarriages and other diseases of pregnancy prevent this expectation from coming to fruition. And then one in five children resulting from successful pregnancies will develop obesity, diabetes and health related complications as the

Nutrition

Nutrition is central to the maintenance of good health, and fundamental to biomedical science. While nutrients were traditionally considered necessary for preventing deficiency diseases, it is increasingly clear that inappropriate diet may be responsible for almost half of the global burden of Non Communicable Diseases, as well as significantly enhancing susceptibility to Communicable Diseases. More generally, “chronic disease” related to diet covers a range of disorders including abdominal obesity, diabetes, cardiovascular disease (cvd), certain cancers, osteoporosis, arthritis, and inflammatory disease. There is a considerable nutrition-related skill base across The University of Auckland, both in the Faculty of Medical and Health Sciences and in the School of Biological Sciences which also directs the Human Nutrition Trial Unit in Mt Eden, with several groups focused on different research areas ranging from molecular nutrition through to population-based studies, and also including clinically related examples. The three papers that form the focus of the third year requirements cover a range of topics in nutrition and metabolism, the role of nutrients in signal transduction and the exciting new field of nutritional genomics (or nutrigenomics).

Nutritional genomics considers the influence of the genome on nutrition, and has the potential to provide tailored nutritional advice to populations groups or to individuals. It recognises that what is appropriate dietary advice for one individual may be inappropriate, or actually harmful, to another. Learning how to understand this interaction at the molecular level, and to apply it in animal studies or at a population level, is the rationale behind the major FRST-funded programme, Nutrigenomics New Zealand, which is run through the School of Medical Sciences (in association with other University of Auckland departments, and three Crown Research Institutes).

Both maternal nutrition (during pregnancy and breastfeeding), and genetic factors, have profound influences on development and growth, both in


grow through puberty into adulthood. In the RGM option you will learn about reproduction in humans and animals. You will learn about the normal development of humans from before the first twinkle in mum and dad’s eyes, through development of the embryo/fetus in the uterus. You will find how life in utero is different to life as we know it –how does a fetus eat and breathe? Learn how the fetus controls mum! You will discover the problems that may be encountered in utero and how we are working to overcome these.

Reproduction is intimately associated with growth and metabolism. Impaired gonad function, obesity and metabolic syndrome commonly occur together. Females require a certain level of fat reserves to initiate puberty and to reproduce. Obesity in women on the other hand, has a negative impact upon reproduction. Similarly, maintenance of a healthy body weight is necessary for optimal male reproductive health. You will learn about hormones, growth factors, and cell signalling mechanisms that allow the fetus to grow and develop into an adult. While some of us will maintain a healthy weight into adulthood, others will be predisposed to developing metabolic diseases, obesity, diabetes and metabolic syndrome. You will learn how hormones and growth factors regulate metabolism and what goes wrong when metabolic diseases develop.

The University of Auckland has a long tradition of excellence in reproductive science, growth and metabolism that continues today. Research groups in the Department of Obstetrics and Gynaecology and Liggins Institute focus on fertility/infertility, ovarian function and failure, reproductive cancers, preterm birth, fetal development, protection of the newborn from brain injury, and the causes of miscarriages and other diseases of pregnancy. Research groups in the Department of Physiology, Molecular Medicine and Pathology and Department of Medicine focus on hormones, growth factors and cell signalling mechanisms involved in growth and development of the fetus and into adulthood, and variations and abnormalities in these hormonal and growth factor signalling pathways that result in overweight,

obesity, diabetes, bone and thyroid diseases and cancer. Staff from AgReseach, Ruakura (Hamilton) are involved in this option. You will visit Ruakura, and the exciting possibility exists to carry out research in New Zealand’s leading animal reproduction group.

For further information and advice contact: Associate Professor Larry Chamley School of Medicine Email: [email protected] Associate Professor Andrew Shelling School of Medicine Phone: 373 7599 ext 83504 Email: [email protected]


at least 45 points from BIOSCI 351, MEDSCI •312, 313, OBSTGYN 351, PHYSIOL 305

at least 15 points from BIOSCI 350, 353, 354, •356-358, MEDSCI 301, 314



MEDSCI 312, 313, BIOSCI 351•

At least 30 points from BIOSCI 350, 353, 354, •356, 358, MEDSCI 301, 314



Course list

BIOSCI 347 S2 C (15 points) Environmental Microbiology and Biotechnology The ecology and physiology of microorganisms in natural and engineered environments. Key themes include marine microbiology, the importance of microbial symbioses to life on Earth, and contemporary research methods in microbiology. Processes such as wastewater treatment and the production of bioactives are used to emphasise exploitation of microbial metabolism for environmental biotechnology purposes.

Prerequisite: 15 points from BIOSCI 204, MOLMED 201, MEDSCI 202 Restriction: BIOSCI 352 Coordinator: Dr Mike Taylor Email: [email protected]

BIOSCI 348 S2 C (15 points) Food and Beverage Microbiology The use and scientific fundamentals of microorganisms in the production of foods and food additives, nutriceuticals and probiotics. Molecular and applied aspects of the fermentation processes for beer and wine including aroma generation and analysis. Microbial food spoilage, pathogens involved, food safety and quality control.

Prerequisite: 15 points from BIOSCI 204, MOLMED 201, MEDSCI 202 Restriction: BIOSCI 352 Coordinator: Dr Silas Villas-Boas Email: [email protected]

BIOSCI 349 S1 (15 points) Biomedical Microbiology The major biochemical, physiological and genetic systems involved in the biology of microorganisms affecting human health. Properties of microorganisms important in pathogenesis and virulence, and examples of infectious diseases. The molecular response of the host cells during infection. The molecular basis for antimicrobial therapy, acquisition of resistance, and

vaccination. Use of microorganisms in medical biotechnology.

Prerequisite: BIOSCI 204 or MOLMED 201 or MEDSCI 202 Coordinator: Dr John Taylor Email: [email protected]

BIOSCI 350 S1 C (15 points) Protein Structure and Function The relationship of molecular structure to protein function will be emphasised. Techniques for the purification, characterisation and production of native and recombinant proteins and three-dimensional structure determination will be combined with a description of protein structure. Specific groups of proteins will be selected to illustrate structure/function relationships and protein evolution.

Prerequisite: BIOSCI 201 and 203 Coordinator: Associate Professor David Christie Email: [email protected]

BIOSCI 351 S1 C (15 points) Molecular Genetics The analysis of genetic material in prokaryotes, viruses, yeast, plants and humans is addressed. The means by which genetic information is transferred and the mechanisms underlying genome diversity will be examined, together with the study of eukaryote genomes at the level of chromosome structure and organisation. The molecular mechanisms underpinning selected inherited human disorders will be discussed as well as the role of model species in understanding normal and perturbed biological pathways.

Prerequisite: BIOSCI 201, 202 Coordinator: Associate Professor Brian Murray Email: [email protected]

BIOSCI 353 S2 C (15 points) Molecular and Cellular Regulation The molecular mechanisms which mediate intracellular sorting and targeting of biologically active molecules and the networks of intracellular and extracellular signals which regulate cell function form the focus of this course. The roles of


growth factors, oncogenes, plasma membrane receptors, nuclear receptors, ion channels and membrane transporters are emphasised.

Prerequisite: BIOSCI 201 and 203 Coordinator: Associate Professor Nigel Birch Email: [email protected]

BIOSCI 354 S2 C (15 points) Gene Expression and Gene Transfer Molecular biology of plant and animal cells is stressed in topics covering gene expression and genetic engineering. These include methods of gene isolation, transcription factors and the control of gene expression, animal viruses as gene vectors, gene therapy in humans, genetic engineering of livestock, methods of gene transfer in plants and examples of genetic engineering for crop improvement.

Prerequisite: BIOSCI 202 and either BIOSCI 201 or 203 or 205 Coordinator: Associate Professor Joanna Putterill Email: [email protected]

BIOSCI 356 S1 C (15 points) Developmental Biology and Cancer Molecular, cellular and genetic aspects of normal and abnormal development focusing on a variety of model systems including Drosophila, the zebrafish and the mouse. Molecular events underlying the development of body form, the differentiation of specific tissues such as the blood, and abnormalities of development which contribute to diseases of the body such as cancer. Implications of transgenic techniques on development.

Prerequisite: BIOSCI 201 and 202 Coordinator: Dr Lorna Johnstone Email:[email protected]

BIOSCI 358 S2 C (15 points) Nutritional Science The scientific basis of nutrition focusing on its biochemistry and physiology in health and disease. Nutritional aspects of carbohydrates, fats, proteins, vitamins and trace nutrients are

covered in an integrated manner. The methodologies which underpin nutritional science and its applications are included. Reference will be made to a broad range of examples, and a number of specific nutritional topics of current interest will also be included.

Prerequisite: BIOSCI 203 Coordinator: Associate Professor Sally Poppitt Email: [email protected]

CHEM 390 S1 C (15 points) Medicinal Chemistry Nature of cellular targets for drug action - lipids, proteins, enzymes, DNA. Principles of molecular recognition. Enzymes and receptors are targets for drug action, DNA as a target for drug action. An overview of approaches to drug discovery and development. Structure-activity relationships, stereochemistry and drug action, prodrugs, drug solubilisation and delivery, drug metabolism, and antibiotic resistance. Laboratories focus on the synthesis, computer modelling and biological testing of drugs.

Prerequisite: No formal prerequisite, but knowledge of organic chemistry and laboratory practice at the level covered in CHEM 230 or CHEM 203 will be assumed. Restriction: CHEM 309 Coordinator: Dr Vijayalekshmi Sarojini Amma Email: [email protected]

CHEM 392 S2 C (15 points) Issues in Drug Design and Development Intellectual property and patent law in the pharmaceutical industry. An overview of the legal and regulatory framework for drug design and development. Clinical trials: formulation of a drug; phase I, phase II and phase III protocols. An introduction to the principles involved in the Codes of Good Manufacturing Practice and Good Laboratory Practice (quality control and quality assurance procedures) as applied to the manufacture of drug products and the quantification of drugs and metabolites in biological fluids. Examples of drug development case studies of selected drugs from design to release.


Coordinator: Dr Vijayalekshmi Sarojini Amma Email: [email protected]

FOODSCI 301 S1 C (15 points) Food Quality Attributes Attributes that make food attractive, such as colour, flavour, and texture, and how they alter during processing are studied. Texture measurement and methods of studying food structure will be discussed. Lectures will be given on non-destructive testing of food.

Recommended preparation: BIOSCI 203 and 204 Prerequisite: FOODSCI 201 Coordinator: Dr Bronwen Smith Email: [email protected]

MEDSCI 301 S2 H (15 points) Molecular Basis of Disease An in-depth analysis of the cellular and molecular basis of disease, including the role of environmental and inherited risk factors, as well as mechanisms of response to cell injury and inflammation in the disease process. Models of common diseases such as diabetes, obesity, cancer and infectious agents will be studied.

Prerequisite: PATHOL 251 or MEDSCI 203 Restriction: PATHOL 301 Coordinator: Dr Nuala Helsby Email: [email protected]

MEDSCI 302 S2 H (15 points) Cancer Biology A study of the scientific basis of cancer including: mechanisms underlying the pathogenesis of cancer, carcinogenesis, DNA damage and repair, properties of cancer cells (including abnormalities of growth and cell cycle control), the growth of tumors, the classification and histopathology of cancers, and an introduction to therapeutic strategies.

Prerequisite: BIOSCI 356 or PATHOL 251 or MEDSCI 203 Restriction: PATHOL 705 or MEDSCI 714 Coordinator: Dr Maggie Kalev Email: [email protected]

MEDSCI 303 S1 H (15 points) Principles of Pharmacology Topics covered are: ADME and pharmacokinetics; therapeutic drug monitoring; drug-drug interactions; pharmacogenetics and pharmacogenomics; drug development and analysis; novel drug delivery, chemotherapy including antibiotics, anticancer and antiviral drugs.

Prerequisite: PHARMCOL 201 or MEDSCI 204 and (PHYSIOL 210 or PHYSIOL 220 or BIOSCI 203 or MEDSCI 205 or MEDSCI 206) Restriction: PHARMCOL 301 Coordinator: Associate Professor James Paxton Email: [email protected]

MEDSCI 304 S1 H (15 points) Molecular Pharmacology Considers the molecular mechanisms of drug action. The cellular and molecular mechanisms of drugs acting at receptors, ion channels, enzymes and intermediate messengers are covered. These concepts are applied through a detailed examination of cell cycle and apoptotic pathways, the molecular basis of drug addiction and the mechanisms of action of common recreational drugs.

Prerequisite: PHARMCOL 201 or MEDSCI 204 and (PHYSIOL 210 or PHYSIOL 220 or BIOSCI 203 or MEDSCI 205 or MEDSCI 206) Restriction: PHARMCOL 302 Coordinator: Associate Professor Michelle Glass Email: [email protected]

MEDSCI 305 S2 H (15 points) Systematic Pharmacology Considers the modification by drugs of human systems under physiological and pathological conditions. The cellular and molecular mechanisms of drugs as receptors, ion channels, enzymes and intermediate messengers are considered. The modification of drugs on the cardiovascular, gastrointestinal, endocrine, reproductive, respiratory and central nervous systems will be covered.


Prerequisite: PHARMCOL 201 or MEDSCI 204 and (PHYSIOL 210 or PHYSIOL 220 or BIOSCI 203 or MEDSCI 205 or MEDSCI 206) Restriction: PHARMCOL 304 Coordinator: Associate Professor Bronwen Connor Email: [email protected]

MEDSCI 306 S2 H (15 points) Principles of Toxicology Considers the principles and concepts that result in detrimental effects in animals and humans. It addresses: biochemical pathways and targets in the toxicity of chemicals, the effects at cellular, organ and whole body level, e.g. cell death, cancer and hypersensitivity, as well as the basis for cell and organ-selective toxicity. Drugs, occupational and environmental toxicants are discussed.

Prerequisite: PHARMCOL 201 or MEDSCI 204 and (PHYSIOL 210 or PHYSIOL 220 or BIOSCI 203 or MEDSCI 205 or MEDSCI 206) Restriction: PHARMCOL 305 Coordinator: Dr Malcolm Tingle Email: [email protected]

MEDSCI 307 S1 H (15 points) Neuroscience: Neuropharmacology An introduction to the principles and concepts involved in neuropharmacology. The course covers: the anatomy, neurochemistry and pharmacology of the normal and diseased human brain; the biochemical causes of psychiatric and neurological diseases; and the types and mechanisms of action of drugs used to treat brain disorders.

Prerequisite: PHARMCOL 201 or MEDSCI 204 and (PHYSIOL 210 or PHYSIOL 220 or BIOSCI 203 or MEDSCI 205 or MEDSCI 206) Restriction: PHARMCOL 306 Coordinator: Professor Mike Dragunow Email: [email protected]

MEDSCI 308 S1 H (15 points) Molecular Neuroscience The molecular physiology of cellular homeostasis and signalling. This discipline integrates molecular biology, electrophysiology, imaging technologies and other advanced techniques in molecular neuroscience and allied fields. The course considers the characterisation and


manipulation of gene expression, and translation to gene therapy treatments for neurological diseases. The lab component focuses on analysis of gene expression and use of recombinant DNA technologies. Practical training includes isolation of RNA, gene cloning, and DNA fingerprinting using the polymerase chain reaction.

Prerequisite: 30 points from PHYSIOL 210, PHYSIOL 220, MEDSCI 205, MEDSCI 206 Restriction: PHYSIOL 301 Coordinator: Dr Srdjan Vlajkovic Email: [email protected]

MEDSCI 309 S2 H (15 points) Biophysics of Nerve and Muscle An advanced treatment of the physiology of excitable cells. Topics include: the biophysical basis of membrane potential, the spread of electrical activation and synaptic transmission, structure, excitation, mechanics and energetics of muscle and functional differences among muscle types. The approach is quantitative with particular emphasis on current advances in the field.

Prerequisite: 30 points from PHYSIOL 210, PHYSIOL 220, MEDSCI 205, MEDSCI 206 Restriction: PHYSIOL 302 Coordinator: Associate Professor Christian Soeller Email: [email protected]

MEDSCI 310 S2 H (15 points) Neurophysiology: Physiology and Pathophysiology of the Brain The relationship between the structure and function of the nervous system in health and disease. Topics include organisational principles of CNS, imaging of the human brain, synaptic function in health and disease, selected topics in pathophysiology of motor and sensory systems (including vision and auditory function), brain ischemia and sleep/sleep disorders. The topics are covered at an advanced level with emphasis in the fields.

Prerequisite: 30 points from PHYSIOL 210, PHYSIOL 220, MEDSCI 205, MEDSCI 206

Restriction: PHYSIOL 303 Coordinator: Professor Janusz Lipski Email: [email protected]

MEDSCI 311 S1 H (15 points) Cardiovascular Biology An advanced treatment of the human cardiovascular system that provides an integrated framework for understanding the structure, function and regulation of the heart and circulation, and their modification by drugs. Topics include: the energetics and mechanics of the heart, the regulation of heart rhythm and the control of blood pressure and the regulation of flow through the microcirculation. The course is illustrated using examples drawn from current research in the field and from representative disease states.

Prerequisite: PHYSIOL 210 or MEDSCI 205 Restriction: PHYSIOL 303 Coordinator: Professor Laura Bennet Email: [email protected]

MEDSCI 312 S2 H (15 points) Endocrinology of Growth and Metabolism An introduction to the mechanism controlling the production of hormones and how these achieve their effects in regulating body function. The course focuses in particular on the hormone systems controlling growth and metabolism and contrasts the differences between fetal and adult life. It also highlights how defects in endocrine systems are associated with conditions such as obesity and diabetes.

Prerequisites: 30 points from BIOSCI 203, MEDSCI 205 Restriction: PAEDS 301, PHYSIOL 305 Coordinator: Dr Kathy Mountjoy Email: [email protected]


MEDSCI 313 S1 H Reproductive Biology (15 points) Aspects of reproductive biology including: regulation of gonadal function, the menstrual and oestrus cycles, ovulation spermatogenesis, feto-maternal physiology including placental function, animal reproduction and assisted reproductive technologies

Prerequisite: BIOSCI 107 or HUMANBIO 142 or BIOSCI 203 or MEDSCI 142 Restriction: OBSTGYN 351 Coordinator: Associate Professor Andrew Shelling Email: [email protected]

MEDSCI 314 S2 H (15 points) Immunology The biology, cellular and molecular events underlying the immune response. The nature and characteristics of antibody-mediated and cell-mediated immunity including antigen recognition and presentation, antibody and T cell receptor structure, immune regulation and cytokines, immunogenetics and histocompatibility. The relationships of the immune system to the activities of pathogenic organisms. Applied immunology including biotechnology, infection, autoimmunity, tumour immunology, transplantation and immunodeficiency.

Prerequisite: BIOSCI 201 or MOLMED 201 or MEDSCI 202 Restriction: BIOSCI 357 Coordinator: Professor Phil Crosier Email: [email protected]

MEDSCI 315 S1 H (15 points) Nutrition, Diet and Gene Interactions Practical applications of nutrition in protection against, and reduction of symptoms in, chronic disease from a clinical perspective. Both non-communicable diseases (e.g. cancer, osteoporosis, auto-immune disease) and communicable disease (e.g. whooping cough, influenza) will be considered. Factors regulating appetite and food intake, and the role of genotype and epigenotype will also be studied.

Prerequisite: BIOSCI 202, 203 Coordinator: Dr Clare Wall Email: [email protected]

PSYCH 305 S2 C (15 points) Human Neuroscience Covers material relating to the neural basis of cognitive processes, including perception, attention, memory and language. Students will be introduced to different methods of inferring mind-brain relations in normal and neurologically-impaired individuals, and different ways of conceptualizing mind-brain relations, such as connectionism and modularism.

Prerequisite: 45 points in Stage II Psychology and 15 points from STATS 101–125, 191, or 15 points from either PHYSIOL 220 or MEDSCI 206 Coordinator: Dr Donna Addis Email: [email protected]

Postgraduate Study in Biomedical ScienceStudents may proceed to postgraduate study in in Biomedical Science by selection for BSc(Hons) - Biomedical Science or, through entry to PGDipSci and MSc in Biomedical Science. The PGDipSci and MSc in Medical Science have been discontinued in favor of the new Biomedical Science programmes.

Honours

90 points BIOMED 791A&B Research Portfolio•

30 points from BIOSCI 736, 737, 741, 742, •755-759, HLTHPSYC 716, MEDSCI 701-723, 725-734, 737

A research portfolio will be prepared on the dissertation topic.

Students will undertake a major piece of research work as part of this portfolio. Most research projects will be associated with the work of research teams in the University.

Advice on the nature of the research portfolio and how to choose a project will be given to students during semester 2.


Programme contacts

Margaret Goldstone Faculty of Science Phone: 373 7599 ext 88622 Email: [email protected]

Associate Professor Michelle Glass Faculty of Medical & Health Sciences Phone: 373 7599 ext 86247 Email: [email protected]

PGDipSci

Prerequisite: A specialisation in Biomedical Science, or equivalent as approved by the Board of Studies (Biomedical Science)

Requirement:

At least 90 points from MEDSCI 703-723, •725-737, BIOSCI 729, 733, 736, 737, 741, 742, 755-761, HLTHPSYC 716

Up to 30 points from other 600 or 700 level •courses as approved by the Board of Studies (Biomedical Science)

MSc 120 Points MSc Prerequisite: A BSc(Hons) in Biomedical, or a PGDipSci in Biomedical Science, or an equivalent qualification as approved by the Board of Studies (Biomedical Science)

Requirement: Research Masters:

120 points: • BIOMED 796 MSc Thesis in Biomedical Science

240 Points MSc Prerequisite: A specialisation in Biomedical Science, or equivalent as approved by the Board of Studies (Biomedical Science)

Requirement: Research Masters:

At least 90 points from MEDSCI 703-723, •725-737, BIOSCI 729, 733, 736, 737, 738, 741, 742, 755-761, HLTHPSYC 716

Up to 30 points from other 700 level courses •as approved by the Board of Studies (Biomedical Science)

120 points: BIOMED 796 MSc Thesis in •Biomedical Science


Postgraduate coursesBIOSCI 729 (15 points) Evolutionary Biology A contemporary approach to central issues in evolutionary biology including mechanisms that produce macroevolutionary patterns. Current research using phylogenetic methods for testing evolutionary hypotheses will be discussed, encompassing the role of selection, the origin of mutations, and concepts of heredity. A sound understanding of BIOSCI 322 or equivalent is assumed.

Restriction: BIOSCI 706 Coordinator: Associate Professor Kendall Clements Email: [email protected]

BIOSCI 733 (15 points) Molecular Ecology and Evolution Interpreting the molecular archive by reconstructing the branching history of inheritance and its relationship to genetic diversity within and between species. Topics may include the neutral theory of molecular evolution, rates of molecular evolution, molecular systematics, genome change and speciation, molecular identification of species, gene flow and population structure, selection at the molecular level, inbreeding depression and mutational load, and the use of molecular markers for estimation of kinship and the description of mating systems. A sound understanding of BIOSCI 322 or equivalent is assumed.

Restriction: BIOSCI 719 Coordinator: Dr Shane Lavery Email: [email protected]

BIOSCI 736 (15 points) Advanced Microbial Genetics Cross-disciplinary issues involved in the understanding of microbial genome structure, gene regulation and metabolism. Includes: the genetic basis of microbial interactions and horizontal gene transfer, the effect of stress and

mutation on microbial and viral evolution and modern approaches used to link gene sequence to biological function and phenotypes.

Coordinator: Dr Susan Turner Email: [email protected]

BIOSCI 737 (15 points) High Resolution Imaging of Biological Molecules X-ray crystallography and electron microscopy are two of the principal techniques used by biologists to determine molecular structure. The theory and practice of X-ray crystallography and electron microscopy, including a laboratory component where 3D structures are determined from experimental data, are addressed. Accessible to students with a variety of backgrounds, including Biology, Bioengineering, Chemistry and Physics. This course complements CHEM 738 and BIOSCI 757.

Coordinator: Associate Professor Alok Mitra Email: [email protected]

BIOSCI 738 (15 points) Advanced Biological Data Analysis Advanced biological data analysis, including analysis of variance with nested and random effects, analysis of covariance, cluster analysis, principal components analysis, multidimensional scaling, and randomisation methods. There will be a practical component to this course involving the use of appropriate statistical software.

Prerequisite: BIOSCI 209 or equivalent Coordinator: TBA Email: TBA

BIOSCI 741 (15 points) Applied Microbiology and Biotechnology Historical overview of the development of industrial microbiology. Diversity and complexity of applications. Biodiversity of fermentations. Microbial metabolism and the assimilation of carbon, nitrogen and sulphur. Interconnections


between catabolic and biosynthetic pathways. Metabolic considerations in continuous culture. Selection, isolation and construction of useful organisms. Manipulation of growth conditions to optimise process yield. Contemporary examples of industrial processes using microbes. A sound understanding of BIOSCI 352 or equivalent is assumed.

Coordinator: Dr Matt Goddard Email: [email protected]

BIOSCI 742 (15 points) Bioinformatics and Computational Biology A selection of contemporary topics in the field of plant biochemistry, including molecular aspects as pertaining to bioinformatics. Topics may include: biosynthesis of cell-wall components, including cellulose and lignin; metabolism of nitrogen as an essential macronutrient; free radicals in plant biology. A sound understanding of BIOSCI 340 or equivalent is assumed.

Restriction: BIOSCI 359 Coordinator: Professor Philip Harris Email: [email protected]

BIOSCI 755 (15 points) Genomics and Gene Expression This course will address the analysis of genomes and gene expression as a means of understanding biological processes. Aspects of functional and chemical genomics will be presented, as well as gene expression profiling using microarray technology. Features of experimental design and data analysis will be discussed in the context of disease and developmental processes. A sound understanding of BIOSCI 351 or equivalent is assumed.

Restriction: BIOSCI 714 Coordinator: Associate Professor Brian Murray Email: [email protected]

BIOSCI 756 (15 points) Proteomics and Protein Interactions Proteomics describes a field of research concerned with the large-scale study of protein expression and function. Highlights biochemical

approaches used to link protein sequence and function. The application of proteomics to drug action, discovery and toxicology will be included. A sound understanding of BIOSCI 350 or equivalent is assumed.

Coordinator: Associate Professor Tom Brittain Email: [email protected]

BIOSCI 757 (15 points) Structural Biology A selection of contemporary topics in the field of structure and function of important biomolecules and cellular activities. Topics may include: protein folding in the cell; motor proteins; influenza and HIV; protein structure determination; protein structure and function from genomic data. A sound understanding of BIOSCI 350 or equivalent is assumed.

Restriction: BIOSCI 717 Coordinator: Associate Professor Peter Metcalf Email: [email protected]

BIOSCI 758 (15 points) Development, Differentiation and Disease A critical analysis of normal and perturbed gene expression in selected model organisms and humans as a means of understanding biological pathways important in development and disease. A sound understanding of BIOSCI 356 or equivalent is assumed.

Restriction: BIOSCI 714, BIOSCI 740 Coordinator: Dr Lorna Johnstone Email: [email protected]

BIOSCI 759 (15 points) Molecular Cell Biology and Biomedicine Explores recent advances in cell biology that have led to a greater understanding of a variety of cellular processes at the molecular level. Emphasis will be placed on biochemical and genetic approaches to understand disease mechanisms at the cellular level. A sound understanding of either BIOSCI 349 or 353 or MEDSCI 314 or equivalent is assumed.

Coordinator: Dr John Taylor Email: [email protected]


MEDSCI 701 (15 points) Special Studies in Medical Science 1 A specific course of study for one or more students. Available only by arrangement between the staff member(s) and students.

Restriction: MEDSCI 702 Coordinator: Associate Professor Roger Booth Email: [email protected]

MEDSCI 702 (15 points) Special Studies in Medical Science 2 The critical review and analysis of research literature relating to a research topic. Components include an extensive literature review article defining the current knowledge relevant to a particular research area, a research proposal outlining proposed master’s research topic and its significance, and a formal presentation of the proposal. Suitable for students intending to undertake a Master’s thesis.

Restriction: MEDSCI 701 Coordinator: Associate Professor Roger Booth Email: [email protected]

MEDSCI 703 (15 points) Advanced Biomedical Imaging Theory and practice of biochemical imaging from the sub-cellular to whole body level with specific emphasis on recent developments. Principles of digital image-processing and image analysis (including quantitative morphology), computed tomography and volume rendering and analysis. Imaging modalities including atomic force microscopy, light and confocal microscopy, electron microscopy, x-ray, CT, ultrasound and magnetic resonance imaging.

Restriction: ANATOMY 751 Coordinator: Professor Alistair Young Email: [email protected]

MEDSCI 704 (15 points) Developmental Genetics Genetics approaches used to understand developmental mechanisms. These utilise a variety of model systems including Drosophila and Zebrafish to study processes such as pattern formation, cell specification, lineage commitment and cell-cell interaction. Insights into control of these events are critical to advancing understanding of disease processes, particularly cancer.

Restriction: MOLMED 701 Coordinator: Professor Phil Crosier Email: [email protected]

MEDSCI 705 (15 points) Infection, Immunity and Disease Examines the ways in which host immune mechanisms control infection, infectious organisms evade host defence mechanisms, and the consequences of these processes for the host. Examples of human infectious diseases will include: HIV, hepatitis B, influenza, tuberculosis and streptococcal infections. Consideration of the consequences of infection will incorporate discussion of immune self/non-self discrimination, immune tolerance and autoimmune mechanisms, including the impact of response against infections on autoimmunity.

Restriction: MOLMED 708 Coordinator: Associate Professor Roger Booth Email: [email protected]

MEDSCI 706 (15 points) Genetic Disease Examines a range of medical genetic disorders that illustrate principles of disease mechanisms, diagnosis and management. These will include: haemophilia, familial cancer, late-onset neurological disorders and mitochondrial disease.

Restriction: MOLMED 710 Coordinator: Professor Peter Browett Email: [email protected]


MEDSCI 707 (15 points) Activities of Microbes in Disease The dynamic interaction between pathogenic micro-organisms and humans will be explored. Examines the molecular mechanisms which enable microbes to survive, proliferate and cause disease; to evolve and acquire new genes; and to control the expression of their genes. Emphasis will be placed on recent advances in the understanding of major human microbial diseases.

Restriction: MOLMED 711 Coordinator: Dr Simon Swift Email: [email protected]

MEDSCI 708 (15 points) Advanced Immunology and Immunotherapy Recent advances in immunology including: the genes and proteins involved in the innate and adaptive immune response, intracellular signalling mechanisms that determine immune outcomes, and the mechanisms by which the immune system learns ‘self’ from ‘non-self’. Examines a range of inflammatory diseases, and methods of immunotherapy, in particular approaches to combat cancer.

Restriction: MOLMED 712 Coordinator: Associate Professor Geoff Krissansen Email: [email protected]

MEDSCI 709 (15 points) Nutrition in Health and Disease The influence that dietary patterns, foods and food components have on the promotion and protection against the common nutrition-related diseases in New Zealand. The relevant epidemiological, clinical, and biochemical/physiological aspects of each disease are covered.

Restriction: NUTRN 700 Contact: Professor Lynnette Ferguson Email: [email protected]

MEDSCI 710 (15 points) Nutrition Mechanisms The mechanisms by which food and food components can influence disease processes including: the interaction between genotype and nutrition, antioxidants and oxidation protection mechanisms, dietary toxicology, the process of atherosclerosis, and the influence of the intra-uterine environment on growth and disease.

Restriction: NUTRN 701 Coordinator: Professor Lynnette Ferguson Email: [email protected]

MEDSCI 711 (15 points) Clinical Nutrition Prevention of malnutrition and maintenance of nutritional status during acute and chronic illness through ‘artificial’ or ‘interventional’ means. Diagnosis and quantitation of malnutrition, and monitoring of nutrition support therapy. Practical techniques, common complications and quality assurance through a multidisciplinary team approach. Includes treatment of anorexia nervosa and cancer cachexia.

Restriction: NUTRN 702 Contact: Associate Professor Lindsay Plank Email: [email protected]

MEDSCI 712 (15 points) Critical Evaluation of Nutritional Therapies The suggested roles for micronutrients, ‘nutriceuticals’ and functional foods in general health, exercise performance and disease are evaluated using an evidence-based approach. The roles of micronutrients as dietary supplements and the potential actions of nutriceuticals and functional foods are also critically evaluated. Regulatory and ethical issues in the use of nutritional remedies are considered, including their use as supplements in chemotherapy or other conventional therapies, or in individuals with no symptoms.

Restriction: NUTRN 703 Contact: Dr Clare Wall Email: [email protected]


MEDSCI 713 (15 points) Principles of Cancer Therapy Examines the molecular and cellular processes underlying cancer treatment and the development of tumour-selective therapy; the principles of radiotherapy and chemotherapy; DNA and the basis for its interactions with anticancer drugs; recognition of DNA by proteins; exploitation of these processes by anticancer drugs, oncogenes and other regulatory gene products; signal transduction mechanisms and strategies for changing cell cycle control; cytokines and the role of host responses in cancer therapy; new approaches to cancer therapy including gene therapy and photodynamic therapy.

Prerequisite: MEDSCI 302 Restriction: PATHOL 704 Coordinator: Dr Maggie Kalev Email: [email protected]

MEDSCI 714 (15 points) Advanced Cancer Biology Advanced studies of concepts related to the biology of cancer. These will include: molecular mechanisms, signal transduction pathways,

genomic instability, telomeres and telomerase, anoikis, DNA damage sensing mechanisms, and hypoxia and tumour progression.

Prerequisite: MEDSCI 302 Restriction: PATHOL 705 Coordinator: Dr Maggie Kalev Email: [email protected]

MEDSCI 715 (15 points) Molecular Toxicology Covers the current understanding of mechanisms implicated in toxicity of drugs and environmental chemicals plus the basis of inter-individual susceptibility. The course identifies strategies used to predict and prevent adverse reactions during drug development.

Restriction: PHARMCOL 711 Contact: Dr Malcolm Tingle Email: [email protected]

MEDSCI 716 (15 points) Drug Disposition and Kinetics Advanced study of the absorption, distribution, metabolism and excretion of drugs, and the analysis of these processes. Also included are:


invivo/invitro techniques in drug ADME studies used in drug development; drug analysis in biological matrices; and pharmaco-genomic aspects related to drug disposition.

Restriction: PHARMCOL 712 Contact: Associate Professor James Paxton Email: [email protected]

MEDSCI 717 (15 points) Advanced Neuroscience: Neuropharmacology An advanced study of current research topics in neuroscience. Involves critical analysis of the literature within the context of a series of major research themes that encompass models from molecular through to systems level neuroscience. Themes will be selected from the following areas: neurogenesis, neurodegeneration and/or addiction.

Restriction: PHARMCOL 713 Contact: Associate Professor Bronwen Connor Email: [email protected]

MEDSCI 718 (15 points) Pharmacology of Anaesthetics and Analgesics General aspects of anaesthetics and analgesics including the development of modern anaesthesia, the mechanisms of action of drugs used in general and local anaesthesia, and issues surrounding safety and efficacy of anaesthesia, including drug error and circadian variation in drug action.

Restriction: PHARMCOL 715 Contact: Dr Guy Warman Email: [email protected]

MEDSCI 719 (15 points) Pharmacometrics An introduction to the application of mathematical models used in the interpretation of pharmacological observations. Computer-based analysis methods are investigated using individual and population-oriented approaches.

Restriction: PHARMCOL 716 Contact: Professor Nick Holford Email: [email protected]

MEDSCI 720 (15 points) Biomedical Research Techniques An introduction to some of the most commonly used techniques used in today’s research laboratories; from tissue culture to confocal microscopy, RT-PCR to mass spectrometry, immunoassay to cloning. Emphasis is placed on understanding the principles behind the techniques, how they are applied to address specific questions, and how to evaluate and use the data they generate.

Restriction: PHARMCOL 719 Course Coordinator: Dr Debbie Young Email: [email protected]

MEDSCI 721 (15 points) Advanced Toxicology Focuses on classes of drugs associated with idiosyncratic adverse reactions and studies to define their metabolic basis and assessment of toxic risk.

Restriction: PHARMCOL 721 Contact: Dr Malcolm Tingle Email: [email protected]

MEDSCI 722 (15 points) Clinical Pharmacology The disposition and action of drugs in the elderly, young and in pregnancy will be considered, as well as therapeutic drug monitoring, pharmacoeconomics, adverse drug reactions, ethnic differences in PK’s and PD’s, evaluation of clinical trials and population kinetics. Emphasis is placed on the use of medicines in humans.

Restriction: PHARMCOL 722 Contact: Professor Nick Holford Email: [email protected]

MEDSCI 723 (15 points) Cancer Pharmacology The pharmacological basis of the action of anti-tumour drugs relevant to human cancer therapy, emphasising the variability of chemotherapy effects, interactions between anti-cancer agents and early phase clinical trials.


Restriction: PHARMCOL 728 Contact: Associate Professor Mark McKeage Email: [email protected]

MEDSCI 725 (15 points) Experimental Design Principles of experimental design and data analysis in physiological research. Topics include: analysis of variance, post-hoc multiple comparisons, non-linear and multiple linear regression, analysis of covariance and statistical power. The approach is practical and computer statistical packages are used.

Restriction: PHYSIOL 701 Coordinator: Dr Denis Loiselle Email: [email protected]

MEDSCI 727 (15 points) Advanced Neuroscience: Neurophysiology An advanced treatment of selected topics in neurophysiology. Involves presentations and critical analysis by the students of the current scientific literature within the context of several major research themes that encompass models from molecular and cellular to systems levels. Themes will be selected from the following areas: (1) motor control and motor disorders (Parkinson’s disease, motorneuron disease, stroke); (2) synapse physiology and pathophysiology; (3) advances in neural stem cell research; and (4) selected topics in sensory neuroscience research.

Restriction: PHYSIOL 703 Coordinator: Professor Janusz Lipski Email: [email protected]

MEDSCI 729 (15 points) Perinatal Physiology and Medicine Fetal development has long-term consequences for health. This advanced course offers a wide range of research themes relating to fetal development and future health. Topics include: placental development, fetal physiology and endocrine regulation and metabolic function during fetal and postnatal life. The course explores pathogenesis of disease and injury of the fetus and newborn, and how biomedical research leads to potential clinical treatment strategies.

Prerequisite: MEDSCI 312 or PHYSIOL 305 Restriction: PAEDS 701, 702, 703, PHYSIOL 708 Coordinator: Dr Mhoyra Fraser Email: [email protected]

MEDSCI 730 (15 points) Reproductive Science Molecular regulation and coordination of normal reproduction. The reproductive disorders that arise when normal biological processes are disrupted. Recent molecular methods have enabled us to study these processes and to understand how they can go wrong. Genomic and proteomic approaches to the understanding of reproduction and reproductive disorders will be presented. Examination of the new technologies that allow us to overcome some of these reproductive problems.

Prerequisite: 15 points from BIOSCI 351, 353, 356, MEDSCI 312, 313, OBSTGYN 351, PHYSIOL 305 Restriction: OBSTGYN 706 Coordinator: Associate Professor Andrew Shelling Email: [email protected]

MEDSCI 731 (15 points) Reproductive Medicine Understanding normal reproductive events and how normal biological processes are disrupted to cause medical problems. A range of specific disorders of reproduction (Pre-eclampsia, polycystic ovarian syndrome, endometriosis), including infertility and gynaecological cancer, will be discussed. Attention will be given to the recent advances in understanding of disease at a molecular level and how they translate to become a clinical disorder.

Prerequisite: 15 points from OBSTGYN 351, PHYSIOL 305, BIOSCI 351, 353, 356 Restriction: OBSTGYN 707 Coordinator: Associate Professor Larry Chamley Email: [email protected]


MEDSCI 732 (15 points) Molecular Aspects of Endocrinology and Metabolism Explores how hormones are able to control such a wide range of physiological processes. Covers molecular aspects of hormone action with particular reference to the neuroendocrine and peripheral endocrine systems that control appetite and metabolism. Other topics covered include how defects in hormone action lead to diseases such as cancer, obesity, Type-2 diabetes and cardiovascular disease.

Coordinator: Professor Peter Shepherd Email: [email protected]

MEDSCI 733 (15 points) Advanced Methods in Cell Physiology The theoretical basis underpinning electrophysiological and live cell imaging techniques. Emphasis will be placed on the instrumentation, data acquisition, and data analysis associated with such technology. The approach is practical and computer-based software programmes are used to analyse pre-recorded data, and data produced by the students themselves.

Restriction: MEDSCI 726, PHYSIOL 702 Coordinator: Dr Kim Dirks Email: [email protected]

MEDSCI 734 (15 points) Advanced Integrative Physiology In the post-genomic world the limitations of reductionism as a basis for understanding complex function have become apparent and it is necessary to integrate genomics with the biology of organ systems. This course will portray how an integrative physiological approach can reveal new levels of understanding in the field of biomedical research. Examples of this approach will be drawn from research programmes within the areas of cardiovascular biology, fetal physiology, neurophysiology and vision.

Restriction: MEDSCI 728, PHYSIOL 705 Coordinator: Associate Professor Simon Malpas Email: [email protected]

MEDSCI 737 (15 points) Biomedical MRI Designed to give students a thorough understanding of a range of biomedical MRI techniques as well as advanced clinical MRI applications such as functional imaging of the brain and cardiovascular system. Laboratories will cover MRI pulse programming, MRI applications in basic science, and MRI applications in clinical medicine.

Coordinator: Dr Alistair Young Email: [email protected]

HLTHPSYC 716 (15 points) Psychoneuroimmunology Outlines the nature of the human immune system, its measurement and limitations of current practices and models. The main focus of the course is the extent to which psychological processes such as stress, emotions and social interactions have been found to influence immune behaviour and the implications of these findings for health and wellbeing. Various theoretical frameworks through which psycho-immune relationships might be understood are presented and discussed.

Coordinator: Associate Professor Roger Booth Email: [email protected]

BIOMED 791A&B Research Portfolio in Biomedical Science 45 Point(s), Thesis An integrated combination of research in an advanced biomedical science research option, consisting of supervised practical work and independent critical analysis of research in the field.

Restriction: BIOMED 790 To complete this course students must enrol in BIOMED 791 A and B.

BIOMED 796A&B MSc Thesis in Biomedical Science (120 points)

Restriction: MEDSCI 796 To complete this course students must enrol in BIOMED 796 A and B.


Advice and support for students

Academic honesty 48

The University of Auckland Library 51

Student services 52

Improve your English langauge skills 56

Students support services 57

Campus maps 58


Academic honestyWhat does The University of Auckland expect of students?All students and staff members of The University of Auckland’s academic community, which shares values such as trust, mutual respect, honesty, integrity and fairness.

1. Work students submit for grading – in coursework and examinations – must ultimately be their own work, reflecting each student’s learning and performance.

2. Where work (ideas, statements, data, illustrations or examples) from other sources is used in coursework, it must be properly acknowledged and referenced.

3. Cheating is a serious academic offence. Marks and qualifications acquired through cheating are acquired dishonestly and do not truly represent the student’s abilities. The grades and qualification that students earn legitimately through their own efforts are de-valued if other students cheat.

4. The University of Auckland will not tolerate cheating, or assisting others to cheat.

What are the types of academic dishonesty or cheating? Academic dishonesty can take many forms, including:

Plagiarism

Plagiarism means using the work of others in •preparing an assignment and presenting it as your own without explicitly acknowledging - or referencing – where it came from. Plagiarism can also mean not acknowledging the full extent of indebtedness to a source. Work can be plagiarised from many sources – including books, articles, the internet and other students’ assignments. Plagiarism can also occur unconsciously or inadvertently.

Examples of plagiarism

Copying or quoting directly a sentence, •sentences, paragraphs from any printed or electronic work created by another without proper acknowledgment or referencing.

Paraphrasing the original source without •proper acknowledgment or referencing.

Copying images, sounds, tables, graphics, •research, results, computer programmes, statistical data, ideas, concepts or text without proper acknowledgment or referencing.

Cut and paste from a source or sources and •presenting it as original work.

Copy unauthorised notes or another student •during exams.

Using information and material from a website •without attribution.

Submitting someone else’s work or ideas without acknowledgement or attribution is not evidence of your own grasp of the material and cannot earn you marks.

Students should also consult the University’s page concerning plagiarism called Referencite, www.cite.auckland.ac.nz, for information on how to avoid plagiarism, which information needs to be referenced and advice on quoting, summarising and paraphrasing.

1. Copying from another student.

This includes copying done with or without the •knowledge of another student. It also includes someone’s coursework that had been submitted in a previous year – at any educational institution. Examples would include:

Copying all or part if someone else’s •coursework, assignment or examination.


Allowing someone else to do all or part of an •assignment for you.

Doing all or part of someone else’s assignment •for them.

2. Making up or fabricating data.

This includes using false data in the writing up •of laboratory reports, or using made-up quotations from interviewees.

3. Submitting the same, or a substantially similar, assignment that you have done for assessment in more than one course.

4. Using material obtained from commercial essay or assignment services, including web-based sources.

Buying or otherwise acquiring essays, answers •or ideas (in whole or in part) and using them in a coursework assignment is unacceptable.

5. Impersonating someone else.

This includes representing another student at a •test or examination, or arranging for someone to represent a student.

6. Misrepresenting disability, temporary illness or injury or exceptional circumstances beyond your control, and then claiming special conditions.

7. Asking or letting a ‘third party’ help in preparing your assignment in ways not authorised by the University.

Students should consult the document ‘Use of •Third Party Assistance in Undergraduate and Postgraduate Coursework: Guidelines for Students’ for guidance as to what is permissible concerning receiving help from a ‘third party’ (i.e. someone other than your teachers).

9. Using work done as part of ‘group study’ or a ‘team’ project in unauthorised ways.

This includes a group of students working •though to the solution of what is intended to be an individual’s assignment.

Students should consult the document •‘Guidelines: Conduct of Coursework’ for further guidance.

Academic Misconduct: What happens if I am not honest about my academic work?

If a student deliberately cheats and receives a penalty, the case will be recorded in a University-wide Register. The record of the offence will normally remain until one year after the student graduates. The Register will help identify repeat offenders, with the risk that these students will receive more severe penalties for repeat offences.


How is group work graded

On the whole, the University requires assessment of the work of individual students. On those rare occasions where the work of a group of students is assessed, group members need to make sure that the workload is shared equally. Course coordinators will determine their own procedures for dealing with cases where the final piece of work reflects unequal participation and effort.

Where you can get help

Typically students cheat because they are having difficulty managing workloads, feel that the course content is too difficult or experience difficulties with the language of the course. None of these reasons are justification for cheating. The University provides many services to help students receive assistance, do better or to make thoughtful decisions about whether to continue. Options of people to approach for assistance include:

The course convenor/coordinator, lecturer, •tutorial leader, lab demonstrator

Head of Department•

Faculty-level official•

Health and Counselling services•

Student Learning Centre•

AUSA or other students’ associations•

Chaplaincy services•

The guidelines on Conduct of Coursework and cheating are set out in full on the Teaching and Learning website at www.auckland.ac.nz/uoa/about/teachingandlearning/Academichonestyandplagiarism

Applications for Aegrotat and Compassionate Consideration An application may be made for aegrotat or compassionate consideration, by candidates who may have been prevented from being present at an examination, or who consider that their preparation for or performance in an examination has been seriously impaired by temporary illness or injury or exceptional circumstances beyond their control. This also applies to tests, but not assignments.

Application forms are available online, or from the relevant campus University Health Services and Examinations Office.

The application form must be submitted to the University Health Services within one week of the date the examination affected took place, or if more than one examination has been affected, then within one week of the last of those examinations.

Following the decision of Senate on an application of Aegrotat or Compassionate Consideration, a student will be informed in writing of the final decision. If the application is declined, students have four weeks in which to apply for reconsideration of the decision.


University Library Te Tumu HerengaThe University Library consists of the General Library and 12 subject-specific libraries with over 2.2 million volumes, a world-class digital library collection, 4700 study spaces with 1100 of those providing access to a computer.

General Library Most science serials are now available electronically. The majority of the science book collection is shelved on Level M where you will also find printed serial collections for biology, marine science, chemistry, computer science, food science, geology, physics, mathematics and statistics. Geography, computer science and psychology serials are shelved with the book collection.

Tamaki Library has resources in computer science, physics, psychology and sport and exercise science.

Leigh Marine Research Laboratory Library has marine science resources.

Courses, tours and trainingTours and hands-on courses will give you the confidence to use the University Library, its Information Commons service and all its resources. If you are a new student, the following courses are recommended:

Library and Resources Overview: an introduction to the University Library resources and services.

Database Searching: how to choose and use databases.

Uni IT Essentials: covers University IT facilities, Netaccount and NetID, Cecil, Webmail, wireless and other electronic resources.

To book a Library course visit www.library.auckland.ac.nz/booking

ServicesVisit the subject librarians in Science Information Services on level M. Consultation sessions are available during visits made by the Subject Librarian to the Departments.

Other Library services include Ask a Librarian Service, Enquiry Desk, Information Commons Help Desk, Inter-Campus Library Delivery Service, Interlibrary Loan and Document Delivery and the Short Loan Collection.

Subject LibrariansVisit the subject librarians in Science InformationServices on Level M. Consultation sessions areavailable during visits made by the SubjectLibrarian to the Departments.

Borrowing and accessing resourcesYour student ID card is your Library card. Use it to access the photocopiers, printers and to borrow items. You also have 24-hour access via the Library website

General Library5 Alfred Street, City CampusPhone: 373 7599 ext 88044www.library.auckland.ac.nz


Student servicesInformation Commons Designed as information hubs, the Information Commons give you computer access and learning support, as well as proving group and individual study areas. You’ll find these facilities at our City, Grafton and Epsom campuses.

Use one of the Information Commons computers or laptops to access your coursework through Cecil (the University’s e-learning system), send emails and browse the Internet, and to complete coursework using MS Office, Adobe Master Collection and other software. You can retrieve information from the library databases, e-journals, e-books and electronic course materials - including recommended readings. You also have access to printers, scanners and photocopiers. Wireless networking technology is available.

At the Kate Edger Information Commons on the City Campus you will find computer training rooms, the Student Learning Centre, a Disabilities Resource room, the Library’s Short Loan service and the English Language Self-Access Centre (ELSAC).

The IC Helpdesks provide walk-in, roaming, email and telephone support with all aspects of student computing resources and services. If you want to develop your IT and information literacy you can attend a training course, use electronic resources on the Library and Information Commons web sites or ask a staff member for help.

Information Commons Phone: 373 7599 ext 82333 Email: [email protected] www.information-commons.auckland.ac.nz

Student Learning CentreThe Student Learning Centre facilitates the development of effective academic learning and research skills for all students, from first year to postgraduate. Advice is offered via workshops and individual consultations as appropriate.

Specific programmes cater for:

Undergraduate Skills eg: Time management, •writing, reading, exams

Postgraduate Skills eg: Project/thesis writing, •research methods, seminars

Te Puni Wānanga – Support for Māori students •

Fale Pasifika – Support for Pasifika students •

English as an Additional Language (EAL) eg: •Critical thinking, reading, writing

Mathematics and Statistics – Support for •specific credit courses

Computer Skills eg: MS Word (Formatting)/•Excel/PowerPoint; SPSS; EndNote

Students experiencing learning/other •disabilities eg: Handwriting, spelling, writing

It is necessary to register with the SLC to utilise our services, this costs $10 for the calendar year.

Student Learning Centre Centre for Academic Development Level 3, Information Commons 9 Symonds Street, Auckland

Phone: +64 9 373 7599 ext. 88850 Email: [email protected] www.slc.auckland.ac.nz


CareersA science degree from The University of Auckland will give you a foundation of knowledge and skills that can lead to a wide range of career opportunities. Graduates may begin their careers in research organisations, local government, central government, universities, commerce and industry, international and community organisations.

University Careers Services can assist you with your career decision making and job search throughout the course of your studies. It is never too early to start planning to get the career you want.

Visit us to discuss your career opportunities, have your CV and cover letter checked, practice for interviews, attend job hunting workshops, access our wide range of information and resources and find out about internships, vacancies and potential employers. Our service is free and available to all current students and recent graduates of The University of Auckland.

A specialist Postgraduate Careers Consultant is also available ([email protected]) to work with PhD and Research Masters students.

It is recommended that students attend employer event presentations and fairs, generally held in the first semester. Attendance at these will help you gain more information about the wide range of career options available with your science degree. You should note that recruitment by key government departments and management consultancies occurs early in the year.

Careers Services advertises job search workshops, job vacancies, internships, employer presentations and careers fairs on Auckland CareerHub at www.auckland.ac.nz/careerhub

For further information please visit our website at www.auckland.ac.nz/careers

University Careers Services Science Student Centre drop-in: 12-2 Tuesday Sci-Space drop-in:12-2 Thursday Contact Sean Pulman Email: [email protected]

City Campus Room 001, ClockTower, 22 Princes Street Open Monday – Friday all year 8.30am to 5pm Phone: 09 373 7599 ext 88727 Email: [email protected]

Tamaki Appointments can be made at the Student Resource Centre Phone: 09 373 7599 ext 85230 Email: [email protected] www.auckland.ac.nz/careers


Welcome to the new WAVE in representation services for students! WELFARE is a welfare referral service. If you’re stressed, hungry or have exhausted your overdraft - we try to help! We have an onsite food bank and hardship funds that you can apply for. We can also put you in contact with the right people and agencies to provide you with the resources you need.

ADVOCACY is run by the Advocacy Manager with support from the Advocacy Assistant and the Student Advocacy Network (SAN). If you feel you have been treated unfairly or have a grievance with the University, WAVE provides a confidential, free service available to all students. They can advise on student rights and university procedures, assist in resolving disputes involving students or staff, and provide information and referrals. They can also provide general legal advice on issues such as tenancy, employment and many other areas of law. SAN hours are 10am - 12 noon every weekday during semester. You can also contact the Advocacy Manager and Advocacy Assistant on Phone 309 0789 ext 202 or 251.

VOICE is student representation - Class Reps and students on University committees. WAVE offers class rep training, class party funding, a class rep handbook and quarterly newsletters. They also organize the election, training and support of University Committee Reps. University committees set the direction for The University of Auckland, drafting policy and regulations. You can have your say through student committee reps. Check out their website at www.ausa.org.nz/wave for more details!

The EDUCATION Vice President (EVP) acts on wider educational issues that affect you. This may include submissions to the University and to central Government. Their role involves bringing concerns about education matters to the wider community.

WAVE is located in AUSA House, 4 Alfred Street (across from the General Library)

Contact us on Phone: 373 0789 x251 Email: [email protected]

Check out our web page at www.ausa.auckland.ac.nz/wave

ChiasmaThe Link in Biotech Enterprise aims to promote a generation of business-savvy scientists with an enterprising spirit amongst the bioscience community at The University of Auckland and to foster the development of networks between the university and the wider New Zealand biotech industry sector. Students across the bioscience/biotech-related faculties (Faculty of Medical and Health Sciences, School of Biological Sciences, Bioengineering Institute and Business School) are encouraged to benefit from this initiative.

Chiasma’s activities are split into three key programmes; I-Volve, Career Catalyst & Synapse. I-Volve challenges participants to propose a novel biotech-related product/service with the potential to become a successful ‘real world’ venture. Career Catalyst is a series of workshops and seminars for bioscience students to enhance their professional development and to gain knowledge of commercial issues. Synapse is Chiasma’s annual premiere Biotech Industry & Career Expo featuring top-level executives from prominent New Zealand biotech companies.

Along with these key events Chiasma is continually developing other events and initiatives to benefit its student, staff and industry members. These include industry site visits, valuable internship and career opportunities, and opportunities to form new and innovative research collaborations.

For more information, check out our webpage at www.chiasma.auckland.ac.nz or email [email protected].


Science IT Support www.sit.auckland.ac.nz/science_IT_support

Computer access

The Faculty of Science has several computer labs for students to use. Students should be aware that each school or department has protocols in place to ensure that equipment is not used for purposes other than those allowed, and that a pleasant and productive working environment is possible for everyone. Computer Systems Regulations are broadly outlined in The University of Auckland Calendar.

www.slc.ec.auckland.ac.nz

Science Computer Labs: Stage 1 CS students: OCL, R303-130 Stage 2 and 3 CS students: FCL, R303-191 Software Engineering students: GCL R303-G91 Math and Stats students: BCL, R303-B91

The Student Resource Centre distributes and sells course books.

Located behind the Student Resource Centre, you will find the Tutorial Assistance Area, a teaching and learning environment for mathematics and statistics students where tutors, identified by their coloured sashes, are available to assist with any difficulties you may have with assignments or understanding lectures. Tutors are usually available between 10.00am and 4.00pm on weekdays during term time. The space, furnished with round tables, is peer based, promotes student-initiated learning and fosters information sharing.

On the other side of the Student Resource Centre is a large, comfortable area equipped with tables, chairs and a microwave, providing a friendly environment in which to relax between lectures.

You will find Sci-Space in Room G16, Ground Floor Science Centre, Building 303.

International Students iSPACE is an area for international students to meet other students, obtain information and attend organised activities and workshops. iSPACE is located on Level 4 of the Kate Edger building on the City Campus. You will have access to international magazines so that you can find out what is happening in your country. You can attend regular workshops and information sessions to help you adjust to living in New Zealand. There will be social and cultural activities to help you make friends.

Pastoral care for international students

If you need top talk to someone about problems or difficulties you may be having, you can speak to one of the International Student Advisors. They offer a free and confidential service to help you seek assistance with any issues related to your studies, accommodation, health, money, adjusting to life in New Zealand, work or immigration. You will also have access to all other support services at the University.

Introducing Sci-Space Sci-Space is a friendly, casual drop in centre for students where you will find the Student Resource Centre, Mathematics and Statistics tutorial assistance and a spacious, informal area where you can study or catch up with friends to chat or have a snack.


Improve your English language skills

Diagnostic English Language Needs Assessment (DELNA)DELNA is only available to students who have accepted a place and enrolled at The University of Auckland. It cannot be used to exclude you from a particular programme and the results do not appear on your academic record.

The screening is a 30 minute compulsory assessment that includes a vocabulary task and a text editing task. It enables us to quickly identify whether or not you need assistance with the demands of academic English. If you do require assistance, you will undertake the second part of the assessment.

You should book your screening assessment during Orientation Week or the first week of semester by going online to: www.delna.auckland.ac.nz/booking

The diagnosis is only necessary if your screening results suggest you need assistance with academic English language skills. This two-hour assessment includes a listening, reading and writing task. It enables us to recommend appropriate English language enrichment options.

If you do need to improve your skills, you will be invited to discuss your needs with the DELNA Language Adviser and guided to sources of effective English language enrichment within the University.

For more information visitwww.delna.auckland.ac.nz

All first-year students are required to undertake an assessment that enables us to identify your level of academic English. This free assessment is available via DELNA.

English Language Self Access Centre (ELSAC) ELSAC is the place where you can:

Get advice about your particular English •language needs for university study

Use a huge variety of English language •resources

Come any time for as long as you like, Monday •to Friday between 9am and 5pm. Visit the ELSAC space, real and virtual, and chat to Siew, Rebecca or Penny — we’re all experienced English language teachers.

ELSAC services are free for as long as you are enrolled at The University of Auckland.

ELSAC

Level 1, Kate Edger Information CommonsPhone: +64 9 373 7599 ext 82134Email: [email protected] more information visitwww.elsac.auckland.ac.nz


Service Location Contact details

Accommodation and Conference Services

O’Rorke Hall, 16 Mount Street +64 9 373 7599 ext [email protected] www.auckland.ac.nz/accommodation

Careers Centre Room 001, The ClockTower www.auckland.ac.nz/careers

Early childhood services 28 Park Avenue Grafton +64 9 373 7599 ext 85894

Chaplain’s Office +64 9 373 7599 ext [email protected]

Disability service Room 036, The ClockTower (south wing)

+64 9 373 7599 ext [email protected]

Mediator’s Office www.auckland.ac.nz/mdr

Equal Opportunities Level 1, The ClockTower (East Wing) +64 9 373 7599 ext 84923www.eo.auckland.ac.nz

Student Financials Office Room 108, ClockTower +64 9 373 7599 ext 84422www.auckland.ac.nz/fees

Health Services(including Counselling)

Level 3, Student Commons +64 9 373 7599 ext 87681

Dental Services Level 3, Student Commons +64 9 373 7599 ext 83860

International Students’ Information Centre

Auckland International, Old Choral Hall

+64 9 373 [email protected] www.auckland.ac.nz/international

Recreation Centre Building 31417 Symonds Street

+64 9 373 7599 ext 84788www.auckland.ac.nz/recreation

Scholarships Office Room 012, The ClockTower +64 9 309 0789 ext [email protected] www.ausa.auckland.ac.nz/wave

Student Advocacy Network AUSA House3 Alfred Street

+64 9 309 0789 ext [email protected] www.ausa.auckland.ac.nz/wave

Student Information Centre Room 112, The ClockTower 0800 61 62 63 +64 9 373 7599 ext [email protected]

Student Learning Centre Level 3, Information Commons +64 9 373 7599 ext 88850

Student loans and allowances

StudyLink 0800 88 99 00www.studylink.govt.nz

Student Resource Centre Science Centre, B01, Building 303 www.science.auckland.ac.nz

Students’ Association AUSA 4 Alfred Street +64 9 309 [email protected]

University Book Shop (UBS) Kate Edger Building www.ubsbooks.co.nz

Student support services


26

24

22

25

19A

18

16

16

18

159

17

1 - 11

8

24

13

57

9

23

18

20-2

6

15

187

5

3a

3

3

16

1412

10

6

2

119

7

5

3

1

25

16

810

12

16

74

16

27

76

67

73

70

58

26

40

24

23

38

36

34

17

11

5

22

20

14

20

KITCHENER ST

EMILY PL

EM

ILY

PL

EDEN CRES

BOWENAVENUE

BO

WE

NLA

NE

SHORTSTREET

WATER

LOO

QUADRANT

PARLIAMENTSTREET

ALFRED

STREET

GR

AF

TO

NR

OA

D

SYM

ON

DS

STREET

PR

INC

ES

STR

EE

T

ED

EN

PR

INC

ES

STR

EE

T

BA

NK

SID

ES

T

CITY RD

AIR

ED

ALE

ST

MOUNT STREET

BEAC

HR

OA

D

AN

ZAC

AVEN

UE

ANZA

C

AVENUE

ALTEN

RO

AD

SHORTLAND STREET

CRE

SC

EN

T

GRAFTO

N

OR

AD

KARI STREET

LOWERDOMAIN

DRIVE

STA

NLE

Y

STR

EET

GR

AFTO

NM

EW

S

WE

LLE

SLE

YS

TR

EE

TE

AS

T

ST PAUL ST

SYM

ON

DS

STR

EET

GR

AFTO

N

RO

AD

WH

ITAKER

PLAC

E

WH

ITA

KE

R

PLA

CE

WA

KE

FIE

LD

ST

WYN

YARD

STR

EET

Grafton

Bridge

STM

ARTIN

S

K’ ROAD

LAN

E

16

16

16

16

49

301

303

Building 110

Biological SciencesEnquiries - Level 2

Building 201

SGGES - Geography & Environmental Science

PsychologyEnquiries

Enquiries

- Level 6

- Level 6

Building 303

Physics

Mathematics

Statistics

Computer Science

Enquiries - Floor 6

- Floor 3

- Floor 2

- Floor 3

Enquiries

Enquiries

Enquiries

Building 301

Chemistry

Science Student Centre Ground Floor

- Floor 5

Faculty of

Enquiries

Enquiries - Level 1

SGGES - Geology

Building 109

General LibraryScience Library Collection

to Queen Street,Harbour Bridge

and North

ALBERT

PARK

to RailwayCampus

Wal

kto

Rai

lway

Cam

pus

600

800

100 sector

200

300

400

400

600

toRailw

ayCam

pus

AUCKLAND CITY HOSPITAL

Hyatt Regency

Auckland

CopthorneAnzac Ave

Queston Eden

Quest on Mount

Quest onCintra Lane

toM

oto

rway

Nort

h&

West

toM

oto

rway

South

toG

raft

onC

ampu

s

from

Moto

rway

Nort

h&

West

from

Moto

rway

South

to Grafton Campus

ALR

OCH

01Wyn

58Sym

BLT

CMBioLT

Chem, Geol

ClockT

CA

C303

FPAA,260.098

Conf

Eng

FA

Algie, Northey, Stone

Small

Lib

MLT, PLT, SLT

M

HSB

OGH

Arts

NH

OGGB

P

P36

P26

P15

P7

P7A

P5

P1V

P40

P6

P10

P14

P20

P20

P21

P24

P4

P2

P18

P29

PP9

P3

P15A

P15B

P16A

P20A

P20B

StudentService

StaffService

P16

Car Park

618

619

322

Thom

asBld

g.

Fine

Arts

114

102

124

118

125

107

123

105

132

135

110

250

223

214

241

212

215

216

207

219

260

273

274

275

220

240246

106

120

121

117111

802

804

801

810

803

820

104

315

201

109

103

313

312

311

301

314

401

402

404

421

225

226

253 255

251 252

206

408

Law

MaclaurinChapelGeorge Fraser

Gallery

OldGovernment

House

Lodge

Kenneth MyersCentre

NewmanHall

FisherBuilding

UniversityHouse

Alfred NathanHouse

'Music Shed'

GeneralLibrary

Old ChoralHall

Biology

HumanSciences

Fale Pasifika Complex

Owen G Glenn Building

Arts 2

AV

Arts1

Marae

Maidment

Kate

Edge

r

Info

Com

mon

s

Stud

ent

Com

m

RecreationCentre

Music

311

311

303

ScienceCentre

ScienceCentre

Engineering

403

409422

423

410

431

432

614

435

601

602

603

InternationalHouse

O'RorkeHall

Fine Arts

ConferenceCentre

Architecture

433

438

439

436

'No.14' Flats

ITS

NZ Post Shop

The ClockTower

805

119

UniServicesHouse

113

620

201

260

423

402

801

301

804

Arts

Business & Economics

Creative Arts & Industries

Engineering

Law

Science

Theology (School of)

Faculty Officesand Student Centres

Emergency Telephone

Hospital

Security

P

P18

Access Parking

Bus Stop, city service

City-Tamaki Bus Stop

Staff Parking, area no

Visitor Parking

Underpass

OGH

Information Desk

Cafeteria

Creche, Kohanga Reo

Disability Services

Equity Advisers

Health & Counselling

Lecture Theatre, code

Library

Mediation

Pharmacy

Postal Agency

Recreation Centre

University BookshopGeo-graphics Unit, School of Geography & Environmental Science

© The University of Auckland, July 2008

Facilities & Services

Security Control Room

11 Wynyard Street

Phone 3737-599

ext 85000

UNISAFE

GU0728

Faculty of Science

CITYnorth

W

S

E

SCALE0 200m


NO

RTH

ER

N

Y

MO

TOR

WA

SO

UTH

ER

NM

OTO

RW

AY

3

151

62

4153

85

28

70

62

50

40

2-6

BOYLECRESC

PA

RK

RO

AD

SE

AF

IEL

DV

IEW

RO

AD

PA

RK

AV

EN

UE

GRAFT

ON

RO

AD

GRAFTON

BRIDGE

SYM

ON

DS

STR

EET

GLA

SG

OW

TC

E

CARLTON GORE RD

PARK

ROAD

16

1

1

16

110

82

85

71

231

75

MERTON

ROAD

MERTONROAD

RO

AD

MORRIN

FE

LTO

NM

ATH

EW

AV

EN

UE

HO

WA

RD

HU

NTE

RA

VE

Field No. 1

Field No. 8

Field No. 9

Field No. 10

Field No. 4

Field No. 5

Field No. 3

Field No. 2

Field No. 7

Field No. 6

Pond

700

sector

to Glen Innes andRailway Station

to City Campus

to Panmure andMt Wellington

Building 502

Anatomy

Physiology

Enquiries - Level G

- Level 3

Optometry & Vision ScienceEnquiries - Level 4

Enquiries

Building 504

Molecular Medicine

& PathologyEnquiries - Level 3

Building 503

Medical Sciences

Pharmacology & Clinical

Pharmacology

Enquiries

Enquiries

- Level 4

- Level 2

Building 740

Wine Science

Building 751

UniSports

Building 731

Computer Science

Psychology Clinic

Building 730

Optometry

Audiology

University Clinics

SLT

Building 750

Sport & Exercise Science

University Clinics

Building 721

Psychology

Building 733

Biological Sciences

IUCN Invasive Species

Specialist Group

Building 734

Sport & Exercise Science

Psychology

north

W

S

E

0 200mSCALE

Geo-graphics Unit, School of Geography & Environmental Science

© The University of Auckland, July 2008

GU0728

north

W

S

E

Henley, Lewis, Robb

SCALE0 100 m

P

P

P8

P23

P23A

P13

P8A

P8B

P22

AUCKLAND CITY HOSPITAL

FERNCROFT

600

500

sector

toM

otorw

ay North&

West

toM

otorw

aySou

th

from

Moto

rway North

&W

est

from

Moto

rway

South

StarshipChildren’s Hospital

GraftonHall

Park Road Flats

Main Building

Car Park

Laboratoryand

Mortuary

504

503

501

599

519

515

511

502

526

520523

518

522629

628

626

529

530

P

P18

OGH

Security

Emergency Telephone

Hospital

Access Parking


Staff Parking, area no

Visitor Parking

Cafeteria

Creche, Kohanga Reo

Faculty Office, Student Centre


Lecture Theatre, code

Library

Pharmacy

Postal Agency

Security Control Room

11 Wynyard Street

Phone 3737-599

ext 85000

UNISAFE

P

P

P

P

P

P

P

P

P

P

P

P

P

P

PGate 1

Gate 2

Gate 2a

Staff & StudentService

Gate 3

Gate 4

Gate 5

East Campus

West Campus Colin Maiden Park

Gate 6

750A

750

751

757760

.2 .1.5

.4.3

701

723 734

721

731

733

710.1

710.2

710.3

701.6

.7

755

758

722

732

730

702

740

Ray MeyerResearch Centre

LandcareResearch

Population

HealthComplex

714

756

630

HuiaResidence

P

P

P

Emergency Telephone

Security Access Parking


City-Tamaki Bus Stop

Staff Parking

Student Parking

Visitor Parking

Cafeteria

Alternative Print Service


Lecture Theatre

Library

University Bookshop

Ora

kei

Sym

onds

St

Que

enS

t

Tamaki Dr

Tamaki Dr ive

Kepa Road

Abbotts Way

Ro adSt Johns

Ngahu

e

RoadRoad

RoadRdK’

Roa

d

Ladies

Mile

Remuera

Remuera Road

SouthRoad

Great

Morrin

Rd

Merton Rd

Kohim

arama

Road

NgapipiRd

KhyberPass

Rd

Epsom Ave

Stokes

Rd

Man

ukau

Roa

d

Park

Rd

Mar

ket Rd

Green Lane

E

PeachPde

Parnell Road

Ponsonby

Great North

Road

Dom

inio

nR

oad

Balmoral Road

Mt

Eden

Roa

d

NewNorth

Road

Helier

sBay

Rd

Apirana

Ave

Felton

Mathew

Ave

St

Quay StreetTang

ihua

St

Customs St

Grafton

St

MO

TOR

WA

Y

MOTORW

AY

NORTHERN

SOUTH

ERN

NORTHW

ESTE

RN

MOTO

RWAY

0 1 2km

Wellesley St · Exit 429B

Green Lane E · Exit 433

W A I T E M A T A H A R B O U R

City Campus

Grafton Campus

EpsomCampus

Railway Campus

Remuera

Mt Eden

Epsom

Eden

Terrace

Newmarket

Parnell

Ponsonby

St Marys

Bay

Meadowbank

OrakeiKohimarama

Mission Bay

St Johns

St Heliers

Orakei Basin

AUCKLAND

CBD

Auckland

Domain

Railway

Railway

Glen

Innes

TamakiCampus

AnzacAve

1

1

16

16

Colle

geRd

Faculty of Science

Contact

Faculty of Science Student Centre

The University of Auckland

Private Bag 92019

Auckland 1142

New Zealand

0800 61 62 63

Phone: +64 9 373 7599 ext 87020

Txt: 5533

Fax: +64 9 373 7431

Email: [email protected]

Web: www.science.auckland.ac.nz

The Faculty of Science Student Centre

8:30am - 5pm Monday - Friday. Students wishing to see the Science Advisors regarding programmes or course advice, planning and approval, may make an appointment to visit during consultation hours. To receive general advice or obtain further information, students are free to drop in throughout the day.

Physical Location

Ground Floor, Science Centre, Building 301

23 Symonds Street, Auckland

www.science.auckland.ac.nz

2010 Biomed Handbook

Documents

Transcript of 2010 Biomed Handbook