1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web:...

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1 Organic Chemistry Instructor Data Professor Lev R. Ryzhkov SM 553/551 Phone 4-3831 FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: [email protected] Office Hours After class

Transcript of 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web:...

Page 1: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Organic ChemistryInstructor Data

Professor Lev R. Ryzhkov SM 553/551Phone 4-3831 FAX 4-4265

Web: pages.towson.edu/ryzhkovE-mail: [email protected]

Office HoursAfter class

Page 2: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Shapes of Atomic Orbitals Four different kinds of orbitals for electrons based on those

derived for a hydrogen atom Denoted s, p, d, and f s and p orbitals most important in organic chemistry s orbitals: spherical, nucleus at center p orbitals: dumbbell-shaped, nucleus at middle

Page 3: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Orbitals and Shells Orbitals are grouped in shells of increasing size and energy Different shells contain different numbers and kinds of orbitals Each orbital can be occupied by two electrons First shell contains one s orbital, denoted 1s, holds only two electrons Second shell contains one s orbital (2s) and three p orbitals (2p), eight

electrons Third shell contains an s orbital (3s), three p orbitals (3p), and five d

orbitals (3d), 18 electrons

Page 4: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 5: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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2p-Orbitals of Carbon In each shell there

are three perpendicular p orbitals, px, py, and pz, of equal energy

Lobes of a p orbital are separated by region of zero electron density, a node

Page 6: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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The Nature of the Chemical Bond

Atoms form bonds because the compound that results is more stable than the separate atoms

Lewis structures show valence electrons of an atom as dots Hydrogen has one dot, representing its 1s electron Carbon has four dots (2s2 2p2)

Stable molecule results at completed shell, octet

(eight electrons) for main-group atoms (two for hydrogen)

Page 7: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Ionic vs. Covalent Bond

Typical ionic bond results from complete electron transfer resulting in electrostatically interacting ions.

1s22s22p63s1 1s22s22p6

Na0 + Cl0 = Na+ + Cl-

neutral cation anion

1s22s22p63s23p5 1s22s22p63s23p6

Commonly found when atoms of widely different electro-negativities are combined, i.e. Li and F (1.0 vs. 4.0) or Na and Br (0.9 vs. 2.8)

Page 8: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Carbon has four valence electrons (2s2 2p2), forming four bonds (CH4) in a stable, long-lived molecules. However, unstable (transient or intermediates) may have less than three bonds.

Page 9: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 10: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 11: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Oxygen has six valence electrons (2s2 2p4) and forms two bonds (H2O) or three (oxonium ions).

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Valences of Nitrogen Nitrogen has five valence electrons (2s2 2p3) and can form

ether three bonds (NH3) or four (NH4+)

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Valence electrons not used in bonding are called nonbonding electrons, or lone-pair electrons Nitrogen atom in ammonia (NH3)

Shares six valence electrons in three covalent bonds and remaining two valence electrons are nonbonding lone pair

Lone Pair Electrons

Page 14: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 15: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 16: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 17: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization: sp3 Orbitals and the Structure of Methane

Carbon has 4 valence electrons (2s2 2p2) CH4 is tetrahedral sp3 hybrid orbitals: s orbital and three p orbitals combine

to form four equivalent, unsymmetrical, tetrahedral orbitals (sppp = sp3)

Page 18: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Tetrahedral Structure of Methane sp3 orbitals on C overlap with 1s orbitals on 4 H atom to form

four C-H bonds Each C–H bond has a strength of 438 kJ/mol and length of

110 pm Bond angle: each H–C–H is 109.5°, the tetrahedral angle.

Page 19: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization:sp3 Orbitals and the Structure of Ethane

Two C’s bond to each other by overlap of an sp3 orbital from each Three sp3 orbitals on each C overlap with H 1s orbitals to form six C–H bonds C–H bond strength in ethane 420 kJ/mol C–C bond is 154 pm long and strength is 376 kJ/mol All bond angles of ethane are tetrahedral

Page 20: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 21: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 22: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization:sp2 Orbitals and the Structure of Ethylene

sp2 hybrid orbitals: 2s orbital combines with two 2p orbitals, giving 3 orbitals (spp = sp2)

sp2 orbitals are in a plane with120° angles Remaining p orbital is perpendicular to the plane

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Page 23: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Bonds From sp2 Hybrid Orbitals Two sp2-hybridized orbitals overlap to form an bond

p orbitals overlap side-to-side to formation a pi (π) bond

sp2–sp2 bond and 2p–2p π bond result in sharing four electrons and formation of C-C double bond

Electrons in the bond are centered between nuclei

Electrons in the π bond occupy regions are on either side of a line between nuclei

Page 24: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Structure of Ethylene H atoms form bonds with four sp2 orbitals H–C–H and H–C–C bond angles of about 120° C–C double bond in ethylene shorter and stronger than

single bond in ethane Ethylene C=C bond length 133 pm (C–C 154 pm)

Page 25: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 26: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 27: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization:sp Orbitals and the Structure of Acetylene

C-C a triple bond sharing six electrons Carbon 2s orbital hybridizes with a single p orbital giving two

sp hybrids two p orbitals remain unchanged

sp orbitals are linear, 180° apart on x-axis Two p orbitals are perpendicular on the y-axis and the z-axis

Page 28: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Orbitals of Acetylene Two sp hybrid orbitals from each C form sp–sp bond pz orbitals from each C form a pz–pz π bond by sideways

overlap and py orbitals overlap similarly

Page 29: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Bonding in Acetylene Sharing of six electrons forms C-C triple bond Two sp orbitals form bonds with hydrogens

Page 30: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization of Nitrogen and Oxygen

Elements other than C can have hybridized orbitals

H–N–H bond angle in ammonia (NH3) 107.3°

N’s orbitals (sppp) hybridize to form four sp3 orbitals

One sp3 orbital is occupied by two nonbonding electrons, and three sp3 orbitals have one electron each, forming bonds to H

Page 31: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Hybridization of Oxygen in Water The oxygen atom is sp3-hybridized Oxygen has six valence-shell electrons but forms only two

covalent bonds, leaving two lone pairs The H–O–H bond angle is 104.5°

Page 32: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Formal Charges Sometimes it is necessary to have structures with

formal charges on individual atoms

We compare the bonding of the atom in the molecule to the valence electron structure

If the atom has one more electron in the molecule, it is shown with a “-” charge

If the atom has one less electron, it is shown with a “+” charge

Neutral molecules with both a “+” and a “-” are dipolar

Page 33: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 34: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 35: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 36: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Page 37: 1 Organic Chemistry Instructor Data Professor Lev R. RyzhkovSM 553/551 Phone 4-3831FAX 4-4265 Web: pages.towson.edu/ryzhkov E-mail: lryzhkov@towson.edu.

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Summary Atom: positively charged nucleus surrounded by negatively charged electrons Electronic structure of an atom described by wave equation

Electrons occupy orbitals around the nucleus. Different orbitals have different energy levels and different shapes

s orbitals are spherical, p orbitals are dumbbell-shaped

Covalent bonds - electron pair is shared between atoms

Molecular orbital (MO) theory, - bonds result from combination of atomic orbitals to give molecular orbitals, which belong to the entire molecule

Sigma () bonds - Circular cross-section and are formed by head-on interaction

Pi (π) bonds – “dumbbell” shape from sideways interaction of p orbitals Carbon uses hybrid orbitals to form bonds in organic molecules.

In single bonds with tetrahedral geometry, carbon has four sp3 hybrid orbitals In double bonds with planar geometry, carbon uses three equivalent sp2 hybrid

orbitals and one unhybridized p orbital Carbon uses two equivalent sp hybrid orbitals to form a triple bond with linear

geometry, with two unhybridized p orbitals

Atoms such as nitrogen and oxygen hybridize to form strong, oriented bonds The nitrogen atom in ammonia and the oxygen atom in water are sp3-hybridized