1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel...

12
1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy

Transcript of 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel...

Page 1: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

1

Next Generation Sequencing Data

Processing

How to use the Virtual Machine (VM)

Andreas Gisel

Institute for Biomedical TechnologiesCNR

Bari - Italy

Page 2: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

2

Virtual Machine (VM)•A virtual machine is a tightly isolated software container that can run its own operating systems

and applications as if it were a physical computer.• A virtual machine behaves exactly like a physical computer and contains it own virtual (ie, software-based) CPU, RAM hard disk and network interface card (NIC).

BenefitsIn general, VMware virtual machines possess four key characteristics that benefit the user:

Compatibility: Virtual machines are compatible with all standard x86 computerIsolation: Virtual machines are isolated from each other as if physically separatedEncapsulation: Virtual machines encapsulate a complete computing environmentHardware independency: Virtual machines run independently of the underlying hardware

Page 3: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

3

Installing the VM Player

Page 4: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

4

Starting the VM

Page 5: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

5

set virtul RAM not bigger than half of your real RAM

Starting the VM

about 15min.

Page 6: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

6

Starting the VM

user: embnetpassword: embnet2012

Page 7: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

7

Starting the VM

Ubuntu Ubuntu ManualManual

short short descriptiodescription of the n of the Virtual Virtual MachineMachine

Page 8: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

8

Setting up the VMIn case you have no connectivity

set up a new wired connection adding ONLY a name and save

Page 9: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

9

Setting up the VMConnect your USB stick

Connect USB stickunmount from host machine

Page 10: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

10

Setting up the VMGet started for the Tutorial

Page 11: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

11

Setting up the VMStop the Virtual Machine

Page 12: 1 Next Generation Sequencing Data Processing How to use the Virtual Machine (VM) Andreas Gisel Institute for Biomedical Technologies CNR Bari - Italy.

12

THANKS

and enjoy your

Virtual Machine