01 Introduction to Biochemsitry

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    BIOCHEMISTRY

    Geromil J. Lara, RMT,MSMT

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    BIOCHEMISTRY

    CREDIT: 5 units (3-2)

    3 Hours Lecture

    6 Hours Laboratory

    Grading System

    Lecture = 50% Laboratory = 50%

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    BIOCHEMISTRY

    Grading System

    Lecture = 50%

    Quizzes = 50%

    Long Exam = 50%

    Laboratory = 50%

    Quizzes = 50% Written Exam = 50%

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    BIOCHEMISTRY

    Topic Outline

    Midterm

    Review of Micromolecules

    The Living Cell

    Proteins

    Enzymes

    Nucleic Acids

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    BIOCHEMISTRY

    Topic Outline

    Finals

    Carbohydrates

    Vitamins

    Lipids

    Metabolisms

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    BIOCHEMISTRY

    Deals with the study of the chemistry of livingorganisms

    Application of the principles and methods of

    chemistry to the field of biology andphysiology

    Concerned with the physico-chemicalprocesses underlying

    Digestion, absorption, circulation, respiration,metabolism, growth, and reproduction

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    BIOCHEMISTRY

    Clinical Biochemistry

    Physiological Chemistry

    Normal processes

    Pathological Chemistry

    Abnormal processes

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    BIOCHEMISTRY

    is both a l i fe science and a chemicalscience

    i t explores the chemistry of l iv ing

    organisms and the molecular basis forthe changes occurr ing in l iv ing cel ls

    has become the foundation forunderstanding al l biologicalprocesses

    i t has provided explanations for thecauses of many diseases in humans,

    animals and plants

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    REVIEW OF BIOMOLECULES

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    ORGANIC COMPOUNDS

    2 General Classif icat ions

    1. HYDROCARBONS

    Conta in only carbon and hydrogen

    ALIPATHIC HYDROCARBONS

    N o b e n z e n e r i n g s o r a d e r i v a t i v e o f t h eb e n z e n e r i n g

    A L K A N E S , A L K E N E S , A N D A L K Y N E S AROMATIC HYDROCARBONS

    C o n t a i n a b e n z e n e r i n g o r a d e r i v a t i v e o ft h e b e n z e n e r i n g

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    HYDROCARBONS

    ALIPATHIC

    Saturatedcontain single

    C-H bond

    Alkanescontain onlysingle bond

    (ethane)

    Unsaturatedcontain 2 or

    more C-H bond

    Alkenescontain at least

    one doublebond (ethene)

    Alkynescontain at leastone triple bond

    (ethyne)

    AROMATIC

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    ORGANIC COMPOUNDS

    General Classif icat ions

    2. Subst i tuted Hydrocarbons

    Which one or more hydrogen atoms is

    replaced by another a tom or group ofa toms

    Funct iona l group

    I s an a tom or group of a toms ar ranged

    in a pa r t i c u la r wa y tha t i s p r im a r i l yr e s pons ib le fo r the c he m ic a l a ndphy s ic a l p r ope r t i e s o f the m ole c u le inwh ic h i t i s found

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    HYDROPHOBICITY vs. HYDROPHILICITY

    HYDROPHOBIC

    Refers to thephysical property of

    a molecule that isrepelled from a massof water

    Alkanes, oils, andfats

    HYDROPHILIC

    Refers to a physicalproperty of a

    molecule that cantransiently bond withwater (H2O) throughhydrogen bonding

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    CHEMICAL BONDS

    2 PrincipalClasses

    1. Ionic Bonding

    Involves at ransfer o f oneor moree lec t rons f romone a tom toanother ,lead ing to theformat ion o f anion ic bond

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    CHEMICAL BONDS

    2 PrincipalClasses

    2. Covalent

    Bonding

    Involves asharing pairs

    of electronsbetweenatoms

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    CHEMICAL BONDS

    HydrogenBonding

    Hydrogen atomis bonded to asmal l , highlyelectronegative

    atom

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