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International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 29 www.ijmece.org
Analysis, feature extraction and compression of ECG signal
with DWT technique using NI-BIOMEDICAL WORKBENCH
& LABVIEW
Anju Malik Rajender Kumar
Department of Electronics & communication Engineering Department of Electronics & communication Engineering
BPSMV Khanpur Kalan, Sonipat, Haryana BPSMV Khanpur Kalan, Sonipat, Haryana
swtanjumalik@gmail.com rajender.mtech@gmail.com
Abstract - Lab VIEW and the signal processing-related toolkits can provide a robust and efficient environment and tools for resolving
ECG (Electrocardiogram) signal dispensation difficulty. This term paper demonstrate how to use these advance powerful tools in
denoising, extracting, analyzing, ECG signals simply and suitably not only in heart illness diagnosis but also in ECG signal
processing research. This paper presents study and analysis of ECG signal using LABVIEW (Advance signal processing toolkit as
well as biomedical workbench 2014). This paper also discuss on Heart rate monitoring and ECG signal compression using DWT
(discrete wavelet transform) technique. Data is imported from online data bank files, such as Physio bank MIT-BIH record to the
application in this tool kit for examination. The proposed algorithm is executed in two steps. In the first stage, ECG indication is
acquired which is after that followed by filtering the raw ECG signal to remove unwanted noises. Then the next stage focuses on
extracting the features from the acquired ECG indication then it detects heart rate, heart rate standard deviation, QRS amplitude, QRS
standard deviation, QRS width, PR-interval, QT-interval their onsets and offsets, as well as at last visualize and analyze the extraction
outcome.
Keywords: - ECG Signal, Feature Extraction, Discrete wavelet transform, NI-Biomedical workbench 2014 and LABVIEW.
I. INTRODUCTION
Human heart is divided into four main chambers called atria
and ventricles both with their left as well as right instances.
Those chambers together form a biological pump for
propelling the blood throughout the body. Moreover those four
observable sections there are several other parts of the heart
for very specialized functions like separating atria From
ventricles, slow inclination circulation, Very fast impulse
propagation etc. all of them performing particular tasks,
ensuring that blood flows suitably and efficiently all the way
through the body. When electrical impulse propagates during
heart and all these particular cells, ECG electrodes pick up that
Impulse in various directions and speed. In this way ECG
waveforms are formed [1-2]. The ECG signal is characterized
by five peaks and valleys labelled by the letters P, Q, R, S, T.
In various cases we moreover use another peak called U. The
normal heart rate is 60 – 100 beats per minute. Heart rate
slower than 60 beats per minute is called bradycardia as well
as a heart rate faster than 100 beats per minute is called
tachycardia.
Figure 1.1: ECG signal representation [4]
International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 30 www.ijmece.org
An ECG signal representation is shown in Fig.1.1. [4] The
main objective of data compression is to reduce the number of
bits so that it reduces the cost of conduction and increases
storage capability. The various sections of this paper are as
follows. Section 2 analysis of ECG signal. This is followed by
NI-Biomedical workbench ECG signal analysis and
compression in section 3. In last section, conclusion is drawn
about the result.
II. ANALYSIS OF ECG SIGNAL
The Lab VIEW Wavelet Analysis Tools give a collection of
Wavelet Analysis VIs that assists you in dispensation signals
in the LabVIEW environment. You can use the Continuous
Wavelet VIs, Discrete Wavelet Vis and Wavelet Packet VIs to
execute the continuous wavelet transform, the discrete wavelet
transform, the integer wavelet transform. The Wavelet
Analysis Tools contain Express VIs that provides interfaces
for signal processing and analysis. This Express VIs enables
you to identify parameters and settings for an analysis and
observe the results without delay. For illustration, the Wavelet
Denoise Express VI graphs both the original as well as
denoised signals. You can see the denoised signal instantly as
you choose a wavelet, identify a threshold, and set other
parameters. Analysis of ECG signal includes ECG signal
generation, feature extraction and pre-processing in ECG
signals.
Fig 2.1General steps for ECG Signal Analysis
A. Pre-processing
Pre-processing Electrocardiogram signals helps to eliminate
contaminants starting the ECG signals. Electrocardiogram
contaminants are confidential into the subsequent categories
[6]:
Power line interference
Patient–electrode motion artefacts
Electrode pop or contact noise
Baseline wandering
Electromyography (EMG) noise
Removing Baseline Wandering
The wavelet transform is an effectual way to remove signals
inside specific sub-bands. The Lab view ASPT provides the
WA Detrend VI which can take away the low frequency trend
of a signal.
Fig 2.2 Using the WA Detrend VI to remove baseline wandering
This process uses the Daubechies6 (db06) wavelet because
this wavelet is similar to the real ECG signal.
Fig 2.3 ECG Signal before and after removing baseline wandering
Noise Removal for Pre-processing
Detection of Peaks
Detection of onset offset of Individual
peaks
Estimation of ECG clinical signatures
Clinical diagnosis by physician
International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 31 www.ijmece.org
B. Feature Extraction
For the intention of diagnosis, often we need to take out
various features from the preprocessed ECG data, including
QRS intervals, PR intervals, QRS amplitudes and QT
intervals, etc. These features give information about the heart
rate, the conduction velocity, the circumstance of tissues
within the heart as well as a variety of abnormalities [8].
Fig 2.4 Implementation of QRS Detection
Fig 2.5 Original ECG, ECG after Detrending, Denoising and QRS parameters
detection
The pre-processed ECG signal is used to identify position of R
impression. After that, all extra features determination is
extracted using innovative signal, because the signal
enhancement may transform these features [10].
Heart Rate monitoring
Fig 2.6 Back Panel for Heart Rate Monitoring
Fig 2.7 Front Panel for Heart Rate Monitoring
III. NI- BIOMEDICAL WORKBENCH ECG
SIGNAL ANALYSIS AND COMPRESSION
Fig 3.1 LABVIEW Biomedical Workbench 2014
The LABVIEW Biomedical Toolkit has the ability for
generate ECG signals from exterior files that (ECG data) can
be taken from MIT-BIH Arrhythmia Database.
1. ECG Feature Extractor
a. Imports ECG signals from different file types. See
Biosignal Viewer for file formats supported.
b. Imports ECG signals from phsiobank ATM (MIT-
BIH ECG database).
c. Integrates robust extraction algorithms to identify
ECG features, such as the QRS Complex, T wave
and P wave.
d. Saves ECG features to TDMS file.
e. Transfers RR distance data to HRV Analysis
application.
f. Exports ECG features reports for printing.
International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 32 www.ijmece.org
Fig 3.2 ECG Feature Extractor
Fig 3.3 ECG Feature Extractor with HR Histogram
Fig 3.4 ECG Feature Extractor Report
2. Heart Rate Variability (HRV) Analyzer
a. Imports RR intervals from an electrocardiogram
(ECG) file that the ECG Feature Extractor
application generates or from a text file that contains
RR intervals.
b. Provides a variety of analysis methods for HRV
analysis including Statistics (histogram), Poincare
plot, FFT (Fast Fourier Transform) spectrum etc.
c. Supports user-defined analysis methods.
d. Exports heart rate variability measurements report for
printing.
Fig 3.5 Heart Rate Variability Analyzer
Fig 3.6 HRV Report
ECG Compression
ECG compression techniques can be categorized into: 1)
direct time-domain techniques, 2) transformed frequency
domain techniques and 3) parameters optimization techniques
[11]
A. Direct Signal Compression Techniques
A direct technique performs the compression immediately on
the ECG signal. These are besides known as time domain
techniques. To obtain a high performance time domain
compression algorithm, intellectual sample collection criteria
should be used. This group includes AZTEC, TP and
CORTES, modified AZTEC algorithms. [11]
B. Transformed ECG Compression Methods Transform
method, changes the time domain signal to the frequency or
other domains and analyzes the power circulation. This group
includes dissimilar transform techniques such as the Fourier
transform, Cosine transform and further newly the wavelet
transform. [12]
International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 33 www.ijmece.org
C. Optimization Methods for ECG Compression
Optimization technique minimizes the renovation factual error
given a bound on the numeral of samples to be extracted or the
class of the reconstructed signal toward is achieved [11].
ECG Compression using Discrete Wavelet Transform:
Wavelets permit both time as well as frequency analysis of
signals at the same time because of the reality that power of
wavelet is determined in time and still possesses the signal
like characteristics [12-13].
Compression Algorithm: Step 1: Downloading of ECG
signal from MIT-BIH arrhythmia data base from Physiobank
ATM.
Step 2: Transform the original ECG signal using DWT.
Step 3: To achieve an adaptive threshold compute the
maximum value of the transformed coefficients.
Step 4: Apply the threshold of a fix noise based on absolute
maximum values of the transform coefficients.
Step 5: Apply inverse discrete wavelet transform to get the
reconstruct signal.
Step 6: Calculation of Signal to Noise ratio (SNR).
Fig 3.7 Block Diagram for ECG Compression using DWT Technique
Fig 3.8 Front Panel for ECG Compression using DWT Technique
IV. CONCLUSION
The advanced analysis scheme accessible on the workstation
is attractive invaluable to the practicing physician as well as
researchers. Clinical applications and investigate studies
simultaneously apply heart rate variability analysis results for
statistical and frequency methods. From the results it can be
concluded that as for by using the LABVIEW WA De trend
virtual instrument and Wavelet Denoise express VI,
wandering and all the irrelevant noise has been successfully
removed from raw ECG signal. The advantage of LABVIEW
(GPL) graphical programming language is that, it provides a
vigorous along with well-organized environment and tool for
generating very quick, less complex as well as useful
algorithms. From the ECG compression results it can be
concluded that as (SNR) signal to noise ratio is calculated to
compress error which yields high data reduction and poor
signal fidelity. For the future work the same data compression
algorithm is to be implemented in FPGA using Verilog HDL.
REFERENCES
[1] G. D. Clifford, F. Azuaje, and P. McSharry, Advanced Methods
And Tools for ECG Data Analysis. Norwood, MA, USA: Artech
House, Inc., 2006.
[2] A. Camm, T. L¨uscher, and P. Serruys, The ESC Textbook of
Cardiovascular Medicine. OUP Oxford, 2009.
[3] Fozzard HA, Haber E, Jennings RB, Katz AM, Morgan HI (eds.)
(1991): The Heart and Cardiovascular System, 2193 Total excitation
of the isolated human heart. Circulation 41 :( 6) 899-912.
[4] Sumi Thomas, Soniya Peter “ Study of Different ECG Signal
Compression Techniques” International Journal of Science and
Research (IJSR) ISSN (Online): 2319-7064 Index Copernicus Value
(2013): 6.14 | Impact Factor (2013): 4.438
[5] Deepa Annamalai, S.Muthukrishnan “Study and analysis of ECG
signal using LABVIEW and Multisim” International Journal of pure
applied research in engineering and technology Research Article
ISSN: 2319-507X, IJPRET, 2014; Volume 2 (7): 26-34
[6] Juan Pablo Martinez, Rute Almeida, Salvador Olmos,,”A Wavelet
Based ECG Delinator: Evaluation on standard data bases”, IEEE
International Journal of Modern Electronics and Communication Engineering (IJMECE) ISSN: 2321-2152 Volume No.-4, Issue No.-4, July, 2016
RES Publication © 2012 Page | 34 www.ijmece.org
Transactions on Biomedical Engineering. 2004, Vol 51, No (4),570-
581
[7] Channappa Bhyri*, Kalpana.V, S.T.Hamde, and L.M.Waghmare
“Estimation of ECG features using LabVIEW” technia– International
Journal of Computing Science and Communication Technologies,
VOL. 2, NO. 1, July 2009. (ISSN 0974-3375)
[8] Mahmoodabadi, S.Z., Ahmadian, A., Abolhasani, M.D., Eslami,
M. and Bidgoli, J.H. 2005. ECG Feature Extraction Based on
Multiresolution Wavelet Transform. Proceedings of the 2005 IEEE
Engineering in Medicine and Biology 27th Annual Conference
(Shanghai, China, September 1-4, 2005). 0-7803-8740-6/05/$20.00
©2005 IEEE.
[9] LabVIEW 2014 Biomedical Toolkit Help Edition Date: June
2014 Part Number: 373696B-01 »View Product Info June 2014,
373696B-01
[10] Jigar D. Shah, M. S. Panse, “EEG purging using LABVIEW
based wavelet analysis”, National Conference on Computational
Instrumentation CSIO Chandigarh, INDIA, pp.19-20, March ,2010
[11] Prof. Mohammed Abo-Zahhad,‖ ECG Signal Compression
Using Discrete Wavelet Transform‖, Vice-Dean for Graduate Studies,
Faculty of Engineering, University of Assiut, Egypt
[12] Mrs.S.O.Rajankar and Dr. S.N. Talbar, ―An Optimized
Transform for ECG Signal Compression‖, ACEEE Int. J. on Signal &
Image Processing, Vol. 01, No. 03, Dec 2010
[13] Ruqaiya Khanam and Syed Naseem Ahmad,‖ ECG Signal
Compression for Diverse Transforms‖, ISSN 2224-5758 (Paper)
ISSN 2224-896X (Online, Vol 2, No.5, 2012