ImageJ MacroBatchMergeChannels.ijm

Dustin SchweitzbergerMirko Wolff

Berlin , 09.09.2016

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Agenda

Motivation

- ImageJ Built in Function

.BatchMergeChannels ijm

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MotivationMerge Channels ...

ImageJ Sample Images

nucleus microtubles phalloidin

merge

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ImageJ Built-In FunctionOpen Input Files ...

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ImageJ Built-In FunctionOpen Input Files ...

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ImageJ Built-In FunctionMerge Channel ...

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ImageJ Built-In FunctionMerge Channel ...

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ImageJ Built-In FunctionChoose a Output Folder and Save the Composite ...

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MotivationBuil-In Function Merge Channels ...

3 images

1composites

≈ 60 sec

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MotivationWhat do you do …?

What do you do,when 180 Imageshave to merge?

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MotivationWhat do you do …?

You‘re waste1hour

of your time?

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MotivationWhat do you do …?

There area bettersolution!

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BatchMergeChannels.ijmStart ...

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BatchMergeChannels.ijmChoose Input and Output Folder ....

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BatchMergeChannels.ijmSettings ...

Search Strings

Sharpening

Macro Control

Composites File

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BatchMergeChannels.ijmReady ...

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BatchMergeChannels.ijmCheck Results ...

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MotivationBatch Merge Channels ...

180 images

60 composites

< 1 min*

* inklusive manueller Eingaben und bei aktueller PC-Hardware mittlerer Ausstattung z.B. Intel I5 und SSD ...

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MotivationBatch Merge Channels ...

Congratulations!You‘re won 1 hour

for scientific work today!

Impressum

Dustin SchweitzbergerDipl.-Ing. Mirko Wolff

+49 176 609 187 61kontakt@mirko-wolff.dewww.mirko-wolff.de

Anton-Saefkow-Platz 1410369 Berlin