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Gene Search is available on

Top page

1. Navigation

2. Query box (keywords)

3. Search type

4. Search organisms

5. Submit button

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1. Add keywords

For example

leaf, SRR037733,

SRP002106, light(Click example button)

2. Checked radio button of

“Experimental condition”

3. Click submit button

Example of Experimental condition search

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Experimental condition search result

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1. Download search result

2. Previous page of search

result

3. Shown result par page

4. The current page / all pages

5. Query box for filtering result

6. Next page of search result

7. Gene search : query is “transcript id”.

8. Link to Plant Omics Data Center (PODC)

9. Browse all candidate gene list

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1.Add keywordsFor example

AT1G01073, myb, DNA

binding

2.Checked radio button of

“Gene”

3.Click submit button ③

Example of gene search

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1. Download Candidate gene list

2. Link to Experimental condition detail page

3. Link to PODC

4. Link to Orthologous detail page

Link to DDBJ

Link to InterPro

Link to KEGG

Link to AmiGo

Link to GRAMENE

Link to Plant Ontology

Gene search result

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1. The list of specific-expressed conditions (runs)

2. Summary of conditions

3. List of runs that belong to the study that contains the

run that are specific-expressed

Experimental condition detail page

Experimental condition detail page3. Main : List of runs that belong to the study that contains the run that are

highly expressed

★specific-expressed condition

2. Summary

same condition

same condition

deduplication

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Conditions contained in “Summary” is deduplication of “Main”.① 2 / 2 (Number of highly expressed conditions / Number of same condition)

Experimental condition detail page

Orthologous detail page

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１．List of candidate transcript belonging to orthologous group

２．Summary table (previously described)

３．Link to Experimental condition detail page

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